Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc6l17
(672 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83731-1|CAB06022.2| 208|Caenorhabditis elegans Hypothetical pr... 87 8e-18
Z83731-3|CAB06020.2| 248|Caenorhabditis elegans Hypothetical pr... 58 8e-09
Z81506-3|CAB04130.1| 197|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z83731-6|CAN86605.2| 208|Caenorhabditis elegans Hypothetical pr... 45 4e-05
Z83731-5|CAN86604.2| 223|Caenorhabditis elegans Hypothetical pr... 45 4e-05
Z82070-9|CAB04916.4| 222|Caenorhabditis elegans Hypothetical pr... 39 0.004
AL132872-4|CAJ76957.2| 222|Caenorhabditis elegans Hypothetical ... 39 0.004
Z81506-8|CAB04125.2| 225|Caenorhabditis elegans Hypothetical pr... 37 0.011
AF002198-3|AAF99933.1| 208|Caenorhabditis elegans Hypothetical ... 34 0.080
Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical pr... 32 0.43
Z68751-7|CAA92977.2| 319|Caenorhabditis elegans Hypothetical pr... 32 0.43
Z93373-2|CAN99669.1| 1671|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z93373-1|CAB07551.1| 1601|Caenorhabditis elegans Hypothetical pr... 28 5.3
AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical ... 28 5.3
Z49073-5|CAA88890.1| 1122|Caenorhabditis elegans Hypothetical pr... 28 6.9
U80450-11|AAM15595.1| 664|Caenorhabditis elegans Temporarily as... 27 9.2
U80450-9|AAK77615.1| 1112|Caenorhabditis elegans Temporarily ass... 27 9.2
U80450-8|AAK77616.1| 949|Caenorhabditis elegans Temporarily ass... 27 9.2
AF101310-1|AAC69216.2| 765|Caenorhabditis elegans Hypothetical ... 27 9.2
>Z83731-1|CAB06022.2| 208|Caenorhabditis elegans Hypothetical
protein M04C9.3 protein.
Length = 208
Score = 87.4 bits (207), Expect = 8e-18
Identities = 62/198 (31%), Positives = 93/198 (46%), Gaps = 8/198 (4%)
Frame = +3
Query: 3 VTGFGPFAN-HPVNASWEAVKLLDKQEIENKHRCELVLIEIPVTYENVDEFVPALWETHT 179
VTGFGPF N S + L K I +L L +I V YE+V + VP LW H
Sbjct: 14 VTGFGPFRGFEEENPSSIIIDELTKNGISG---VDLELHKITVAYEDVSKKVPELWNEHK 70
Query: 180 PKLMIHVGVSSIANELTLEVQAHKKGYQRLDYFDKCPANH--VCTADGAVRIHTKLNVER 353
P L+IH+G + + E QA GY D PA++ C+++ + + +N +
Sbjct: 71 PDLVIHLGAHPVEKTIKFEQQAFSNGYCSNDVNGCTPADNKTSCSSEHETLV-SCINCDF 129
Query: 354 ICKEFNDASPEDSTR-----AVSSKDAGRYLCEYIYYTSLSVDNSRTLFVHVPDTNVYSS 518
+ + + D + S+D GRYLC + Y+ SL D S++LF+HVP +
Sbjct: 130 LVTKVTEKCALDGQKYSGLCVKKSEDPGRYLCGFSYFLSLHEDCSKSLFIHVP---AFKE 186
Query: 519 EQTARGLQRIIELCIEQI 572
E T + +I I I
Sbjct: 187 ECTKEAVTEVIRETINTI 204
>Z83731-3|CAB06020.2| 248|Caenorhabditis elegans Hypothetical
protein M04C9.2 protein.
Length = 248
Score = 57.6 bits (133), Expect = 8e-09
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 12/202 (5%)
Frame = +3
Query: 3 VTGF-GPFANHPVNASWEAVKLLDKQEIENKHRCELVLIEIPVTYENVDEFVPALWETHT 179
+T F G F + N S + L K+EIEN + + PV+YE V E VP L E +
Sbjct: 49 ITAFDGQFEDLDYNPSSVVIDELLKEEIEN---VRFTVHKFPVSYETVAEKVPELREKY- 104
Query: 180 PKLMIHVGVSSIANELTLEVQAHKKGYQRLDYFDKCPANHVCT------ADGAVRIHTKL 341
P ++H+ S+ N + E +A GY + D P + + AD + +
Sbjct: 105 PDEVLHLAAHSVKNRVLFEEKAFSDGYVKKDVNGFVPEGNTISSENYEDADDRKSLKPFI 164
Query: 342 NVERICKEFNDASPEDSTR-----AVSSKDAGRYLCEYIYYTSLSVDNSRTLFVHVPDTN 506
+ + + ++ + D + S++ GR + Y+YY SL TL +H+P
Sbjct: 165 DFDFLIEDVTEKCGLDGEKFGGLTVGKSQEPGRSVGGYLYYLSLRERPINTLLIHIPP-- 222
Query: 507 VYSSEQTARGLQRIIELCIEQI 572
+ E T + +I I+ I
Sbjct: 223 -FEGECTKEAVTNVIREAIKFI 243
>Z81506-3|CAB04130.1| 197|Caenorhabditis elegans Hypothetical
protein F16H6.4 protein.
Length = 197
Score = 50.0 bits (114), Expect = 2e-06
Identities = 39/129 (30%), Positives = 57/129 (44%), Gaps = 6/129 (4%)
Frame = +3
Query: 129 TYENVDEFVPALWETHTPKLMIHVGVSSIANELTLEVQAHKKGYQRLDYFDKCPAN-HVC 305
+YE VDE +P + + IH+G S N L + A+ GY D K P V
Sbjct: 67 SYEKVDE-IPEKIDAERIRYAIHLGSHSQKNVLQIFQSAYSDGYTEEDKNGKVPVGGKVK 125
Query: 306 TADGAVRIHTKLNVERIC---KEFNDASPED--STRAVSSKDAGRYLCEYIYYTSLSVDN 470
A+ TK+N E + E+ D++ E R + A R L YIY++ L
Sbjct: 126 CAETETGFRTKINCENVVTAVNEYMDSNREKFGELRIETLNKAERNLDGYIYFSFLKQKP 185
Query: 471 SRTLFVHVP 497
R LF+ +P
Sbjct: 186 CRNLFIRIP 194
>Z83731-6|CAN86605.2| 208|Caenorhabditis elegans Hypothetical
protein M04C9.1b protein.
Length = 208
Score = 45.2 bits (102), Expect = 4e-05
Identities = 39/194 (20%), Positives = 84/194 (43%), Gaps = 6/194 (3%)
Frame = +3
Query: 3 VTGFGPFANHPVNASWEAVKLLDKQEIENKHRCELVLIEIPVTYENVDEFVPALWETHTP 182
+ GF N N S + ++ + ++ +K + LI+ P++Y+ + + + L+E
Sbjct: 20 IVGFETSEN-ATNPSNDVMEQICSEQYSDKM---IFLIKFPLSYDPLKQKIDELFEC-PG 74
Query: 183 KLMIHVGVSSIANELTLEVQAHKKGYQRLDYFDKCPANHVCTADGAVR-IHTKLNVERIC 359
+ H + N + +E +A + GY + D P + + + + T ++ +
Sbjct: 75 VVAFHFETHLVKNTIYVEKKAFQSGYHQKDEKGYLPEGNKVSCESVDNTLETIIDCMDVV 134
Query: 360 KEFNDASPEDSTR-----AVSSKDAGRYLCEYIYYTSLSVDNSRTLFVHVPDTNVYSSEQ 524
K+ + D + S+D GR + Y YY SL ++F+HVP + E
Sbjct: 135 KKVTEKCGLDGVKFGGLKVEVSEDPGRSIGAYSYYLSLQKSTKNSIFIHVPP---FGGEC 191
Query: 525 TARGLQRIIELCIE 566
T + +++ I+
Sbjct: 192 TKEAVVNVVKEIID 205
>Z83731-5|CAN86604.2| 223|Caenorhabditis elegans Hypothetical
protein M04C9.1a protein.
Length = 223
Score = 45.2 bits (102), Expect = 4e-05
Identities = 39/194 (20%), Positives = 84/194 (43%), Gaps = 6/194 (3%)
Frame = +3
Query: 3 VTGFGPFANHPVNASWEAVKLLDKQEIENKHRCELVLIEIPVTYENVDEFVPALWETHTP 182
+ GF N N S + ++ + ++ +K + LI+ P++Y+ + + + L+E
Sbjct: 35 IVGFETSEN-ATNPSNDVMEQICSEQYSDKM---IFLIKFPLSYDPLKQKIDELFEC-PG 89
Query: 183 KLMIHVGVSSIANELTLEVQAHKKGYQRLDYFDKCPANHVCTADGAVR-IHTKLNVERIC 359
+ H + N + +E +A + GY + D P + + + + T ++ +
Sbjct: 90 VVAFHFETHLVKNTIYVEKKAFQSGYHQKDEKGYLPEGNKVSCESVDNTLETIIDCMDVV 149
Query: 360 KEFNDASPEDSTR-----AVSSKDAGRYLCEYIYYTSLSVDNSRTLFVHVPDTNVYSSEQ 524
K+ + D + S+D GR + Y YY SL ++F+HVP + E
Sbjct: 150 KKVTEKCGLDGVKFGGLKVEVSEDPGRSIGAYSYYLSLQKSTKNSIFIHVPP---FGGEC 206
Query: 525 TARGLQRIIELCIE 566
T + +++ I+
Sbjct: 207 TKEAVVNVVKEIID 220
>Z82070-9|CAB04916.4| 222|Caenorhabditis elegans Hypothetical
protein W04E12.7 protein.
Length = 222
Score = 38.7 bits (86), Expect = 0.004
Identities = 33/129 (25%), Positives = 51/129 (39%), Gaps = 6/129 (4%)
Frame = +3
Query: 129 TYENVDEFVPALWETHTPKLMIHVGVSSIANELTLEVQAHKKGYQRLDYFDKCP-ANHVC 305
+YE DE + A T IH+ S N L + A+ GY + D K P V
Sbjct: 71 SYEKADE-IAAKMATEEIHFTIHLSSHSQKNVLQIFQSAYSDGYTQQDKDGKVPEGGKVK 129
Query: 306 TADGAVRIHTKLNVERICKEFNDASPED-----STRAVSSKDAGRYLCEYIYYTSLSVDN 470
++ + + E + KE N+ D + S A R L Y +++ +
Sbjct: 130 CSETETGARSNVKCEEVAKEVNERMDSDKDKFGDLKVESLGKAERNLDGYTFFSFMKQKP 189
Query: 471 SRTLFVHVP 497
R LF+ VP
Sbjct: 190 RRNLFIGVP 198
>AL132872-4|CAJ76957.2| 222|Caenorhabditis elegans Hypothetical
protein W04E12.7 protein.
Length = 222
Score = 38.7 bits (86), Expect = 0.004
Identities = 33/129 (25%), Positives = 51/129 (39%), Gaps = 6/129 (4%)
Frame = +3
Query: 129 TYENVDEFVPALWETHTPKLMIHVGVSSIANELTLEVQAHKKGYQRLDYFDKCP-ANHVC 305
+YE DE + A T IH+ S N L + A+ GY + D K P V
Sbjct: 71 SYEKADE-IAAKMATEEIHFTIHLSSHSQKNVLQIFQSAYSDGYTQQDKDGKVPEGGKVK 129
Query: 306 TADGAVRIHTKLNVERICKEFNDASPED-----STRAVSSKDAGRYLCEYIYYTSLSVDN 470
++ + + E + KE N+ D + S A R L Y +++ +
Sbjct: 130 CSETETGARSNVKCEEVAKEVNERMDSDKDKFGDLKVESLGKAERNLDGYTFFSFMKQKP 189
Query: 471 SRTLFVHVP 497
R LF+ VP
Sbjct: 190 RRNLFIGVP 198
>Z81506-8|CAB04125.2| 225|Caenorhabditis elegans Hypothetical
protein F16H6.7 protein.
Length = 225
Score = 37.1 bits (82), Expect = 0.011
Identities = 36/132 (27%), Positives = 54/132 (40%), Gaps = 9/132 (6%)
Frame = +3
Query: 129 TYENVDEFVPALWETHTPKLMIHVGVSSIANELTLEVQAHKKGYQRLDYFDKCP-ANHVC 305
+Y VDE + A T IH+ S N + + A+ GY D K P V
Sbjct: 71 SYGKVDE-IAAKMVTEEIHFTIHLCSHSQKNVIEIFQSAYSNGYTEKDKKGKIPEGGKVK 129
Query: 306 TADGAVRIHTKLNVERICKEFNDA--SPEDS------TRAVSSKDAGRYLCEYIYYTSLS 461
A +K+N E + KE N+ S +D + VS + L Y Y++ +
Sbjct: 130 CAGTETGARSKVNCEEVAKEVNERIDSAKDKFGEFWESGEVSPRVGVLNLDGYTYFSFMK 189
Query: 462 VDNSRTLFVHVP 497
+ R LF+ VP
Sbjct: 190 QKSRRNLFIRVP 201
>AF002198-3|AAF99933.1| 208|Caenorhabditis elegans Hypothetical
protein F35F10.6 protein.
Length = 208
Score = 34.3 bits (75), Expect = 0.080
Identities = 29/135 (21%), Positives = 58/135 (42%), Gaps = 6/135 (4%)
Frame = +3
Query: 111 LIEIPVTYENVDEFVPALWETHTPKLMIHVGVSSIANELTLEVQAHKKGYQRLDYFDKCP 290
L ++ +Y NVD+ V + + + IH+ S+ N + + A GY + D P
Sbjct: 49 LFKMEESYINVDQVVQEIANIQS-RYAIHLSSHSLKNTIQIVRTAFPNGYTQNDKNGNVP 107
Query: 291 ANHVCTADGAVRI-HTKLNVERICKEFNDASPEDSTR-----AVSSKDAGRYLCEYIYYT 452
+ DG + T ++ E++ K+ + ED + +++ R L Y Y++
Sbjct: 108 EGNKVKFDGDETVMKTTVDCEQLVKDIKEFMEEDRQKYGELEIQIIEESERNLDGYAYFS 167
Query: 453 SLSVDNSRTLFVHVP 497
L T+ + +P
Sbjct: 168 FLKFVPCGTIHLRIP 182
>Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical protein
W05B2.2 protein.
Length = 1278
Score = 31.9 bits (69), Expect = 0.43
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3
Query: 279 DKCPANHVCTADGAVRIHTKLNVERIC 359
D CP H CTA G+V I L ++ IC
Sbjct: 965 DDCPEFHKCTAQGSVSICCGLEIQDIC 991
>Z68751-7|CAA92977.2| 319|Caenorhabditis elegans Hypothetical
protein T05E11.6 protein.
Length = 319
Score = 31.9 bits (69), Expect = 0.43
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +3
Query: 219 NELTLEVQAHKKGYQRLDYFDKCPANHVCTADGAVRIHTKLNVERI 356
N LT EV+A DY D CPA + G + H +V+R+
Sbjct: 247 NFLTKEVKALNSSANMQDYIDSCPARKCLSNTGVRKDHYPKDVKRV 292
>Z93373-2|CAN99669.1| 1671|Caenorhabditis elegans Hypothetical
protein C01B9.1b protein.
Length = 1671
Score = 28.3 bits (60), Expect = 5.3
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = +3
Query: 105 LVLIEIPVTYENVDEFVPALWETHTPKLMIHVGV 206
++ IEIP++Y ++ W++ P+++ HVG+
Sbjct: 77 ILAIEIPISYISIQFVNRECWKSLNPEVVSHVGM 110
>Z93373-1|CAB07551.1| 1601|Caenorhabditis elegans Hypothetical
protein C01B9.1a protein.
Length = 1601
Score = 28.3 bits (60), Expect = 5.3
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = +3
Query: 105 LVLIEIPVTYENVDEFVPALWETHTPKLMIHVGV 206
++ IEIP++Y ++ W++ P+++ HVG+
Sbjct: 7 ILAIEIPISYISIQFVNRECWKSLNPEVVSHVGM 40
>AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical
protein Y55F3BR.2 protein.
Length = 1594
Score = 28.3 bits (60), Expect = 5.3
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 9/63 (14%)
Frame = +3
Query: 279 DKCPANHVCTADGAVRIHT--KLNVERIC----KEFNDA---SPEDSTRAVSSKDAGRYL 431
+ CP N+ CT + + HT + + +C K F D SP A K G YL
Sbjct: 886 NNCPINYDCTLNALTQEHTCCGSDGQGVCPSGEKAFMDPRTNSPRQCAMAADGKCPGGYL 945
Query: 432 CEY 440
C +
Sbjct: 946 CRF 948
>Z49073-5|CAA88890.1| 1122|Caenorhabditis elegans Hypothetical
protein ZK970.6 protein.
Length = 1122
Score = 27.9 bits (59), Expect = 6.9
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +1
Query: 571 STRPKQRPASQPLCETLGSLTPR 639
S +P+ RP ++ +C+ L +TPR
Sbjct: 797 SEQPEDRPKAEQICKLLSEMTPR 819
>U80450-11|AAM15595.1| 664|Caenorhabditis elegans Temporarily
assigned gene nameprotein 163, isoform d protein.
Length = 664
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +3
Query: 60 KLLDKQE--IENKHRCELVLIEIPVTYENVDEFVPALWE 170
+ ++K+E +EN + E+ EIP +Y+ D PA W+
Sbjct: 104 RAIEKRENSVENVSQEEVARTEIPQSYQQNDISTPAKWD 142
>U80450-9|AAK77615.1| 1112|Caenorhabditis elegans Temporarily
assigned gene nameprotein 163, isoform a protein.
Length = 1112
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +3
Query: 60 KLLDKQE--IENKHRCELVLIEIPVTYENVDEFVPALWE 170
+ ++K+E +EN + E+ EIP +Y+ D PA W+
Sbjct: 104 RAIEKRENSVENVSQEEVARTEIPQSYQQNDISTPAKWD 142
>U80450-8|AAK77616.1| 949|Caenorhabditis elegans Temporarily
assigned gene nameprotein 163, isoform c protein.
Length = 949
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +3
Query: 60 KLLDKQE--IENKHRCELVLIEIPVTYENVDEFVPALWE 170
+ ++K+E +EN + E+ EIP +Y+ D PA W+
Sbjct: 104 RAIEKRENSVENVSQEEVARTEIPQSYQQNDISTPAKWD 142
>AF101310-1|AAC69216.2| 765|Caenorhabditis elegans Hypothetical
protein C39F7.2 protein.
Length = 765
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -1
Query: 555 AL*CAASLERFVPTSTH*CPGRGQTMYGYYPRTAMCSRC 439
A+ A ++ + +TH PG G TMY + +CSRC
Sbjct: 263 AITTATTVRDLLRCATH--PGEGLTMYCLACKVPVCSRC 299
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,121,418
Number of Sequences: 27780
Number of extensions: 359347
Number of successful extensions: 1074
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1071
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -