Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6l08
         (645 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...   171   2e-44
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   8.3  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       23   8.3  

>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score =  171 bits (416), Expect = 2e-44
 Identities = 88/190 (46%), Positives = 122/190 (64%), Gaps = 3/190 (1%)
 Frame = +2

Query: 71   SYTKFIDEYKELGHLS--EVDRPRFGNYLPHHCVLRENSETTKLRVVFDASAKTSSGKSL 244
            +Y  F+ EY  LGH+S  E +    G Y+PHH V +++S TTK RVVFD S KTS+G+SL
Sbjct: 702  AYEAFMQEYITLGHMSVRENENSSDGYYMPHHAVFKQDSTTTKCRVVFDGSCKTSNGRSL 761

Query: 245  NDIQAVGPVVQSDLFSILLRFRGHRFVLLGDIEKMYRQTALHKSQRHLQLILWRDSSLST 424
            NDI  VGP +Q D   ILLR+R     ++GD+EKMYRQ  +H+  R  Q ILWR  S   
Sbjct: 762  NDILKVGPTIQQDTTDILLRWRRRAIAVVGDVEKMYRQVWVHEEDRKFQRILWRSHS--- 818

Query: 425  EPNKNDNLKILQLNTVTYGLASAPFLSTRCLLQLAKECTDD-TIANIIKNDFYIDDLNTG 601
                ++ +K  +LNT+TYG ASAPFL+ R L Q+ ++  +   +A    NDFY+DD  +G
Sbjct: 819  ----SEKIKTYELNTITYGTASAPFLAIRTLNQVLEDNKEKYPLAASRINDFYVDDFISG 874

Query: 602  ANSQNELQXI 631
            A+S+NE + +
Sbjct: 875  ADSENEAKQL 884


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +1

Query: 214  LSQNIIW-EVVK*HTGCRSSSAV*FILNFVTFSRSPICSLRGYRENVP 354
            L+Q +I  E  +  +G  SSS    + +F+++ R P+     Y EN P
Sbjct: 3047 LAQKLIAPETYENSSGRYSSSGANSLGSFLSYLRIPLDWFLNYHENTP 3094


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 10/41 (24%), Positives = 21/41 (51%)
 Frame = +2

Query: 431 NKNDNLKILQLNTVTYGLASAPFLSTRCLLQLAKECTDDTI 553
           N  + L   QLN ++  +   PFL  + +L  ++ C + ++
Sbjct: 787 NNTNRLYTPQLNHISMRMPPVPFLPGKDVLDESQFCNETSV 827


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 617,284
Number of Sequences: 2352
Number of extensions: 12889
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)