Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6l08
         (645 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC016177-1|AAH16177.1|  356|Homo sapiens Unknown (protein for IM...    32   2.0  
BC014847-1|AAH14847.1|  436|Homo sapiens origin recognition comp...    32   2.0  
AY600302-1|AAS94326.1|  436|Homo sapiens origin recognition comp...    32   2.0  
AF132596-1|AAD22110.1|  436|Homo sapiens origin recognition comp...    32   2.0  
AF047598-1|AAC80282.1|  436|Homo sapiens origin recognition comp...    32   2.0  
AF022108-1|AAC01957.1|  436|Homo sapiens putative replication in...    32   2.0  
AC009480-1|AAX93051.1|  290|Homo sapiens unknown protein.              32   2.0  
BC041868-1|AAH41868.1|  824|Homo sapiens VPS54 protein protein.        31   2.7  
BC030275-1|AAH30275.1|  965|Homo sapiens vacuolar protein sortin...    31   2.7  
AY444798-1|AAS20945.1|  977|Homo sapiens vacuolar sorting protei...    31   2.7  
AK002205-1|BAA92134.1|  398|Homo sapiens protein ( Homo sapiens ...    31   2.7  

>BC016177-1|AAH16177.1|  356|Homo sapiens Unknown (protein for
           IMAGE:3906697) protein.
          Length = 356

 Score = 31.9 bits (69), Expect = 2.0
 Identities = 22/75 (29%), Positives = 37/75 (49%)
 Frame = +2

Query: 341 EKMYRQTALHKSQRHLQLILWRDSSLSTEPNKNDNLKILQLNTVTYGLASAPFLSTRCLL 520
           EK           R +Q +L +  ++S        L +L LN VT   AS PF++   L+
Sbjct: 167 EKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVT---ASHPFMTAVDLM 223

Query: 521 QLAKECTDDTIANII 565
           + ++ C+ D+ ANI+
Sbjct: 224 EASQLCSMDSKANIV 238


>BC014847-1|AAH14847.1|  436|Homo sapiens origin recognition
           complex, subunit 4-like (yeast) protein.
          Length = 436

 Score = 31.9 bits (69), Expect = 2.0
 Identities = 22/75 (29%), Positives = 37/75 (49%)
 Frame = +2

Query: 341 EKMYRQTALHKSQRHLQLILWRDSSLSTEPNKNDNLKILQLNTVTYGLASAPFLSTRCLL 520
           EK           R +Q +L +  ++S        L +L LN VT   AS PF++   L+
Sbjct: 247 EKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVT---ASHPFMTAVDLM 303

Query: 521 QLAKECTDDTIANII 565
           + ++ C+ D+ ANI+
Sbjct: 304 EASQLCSMDSKANIV 318


>AY600302-1|AAS94326.1|  436|Homo sapiens origin recognition
           complex, subunit 4-like (yeast) protein.
          Length = 436

 Score = 31.9 bits (69), Expect = 2.0
 Identities = 22/75 (29%), Positives = 37/75 (49%)
 Frame = +2

Query: 341 EKMYRQTALHKSQRHLQLILWRDSSLSTEPNKNDNLKILQLNTVTYGLASAPFLSTRCLL 520
           EK           R +Q +L +  ++S        L +L LN VT   AS PF++   L+
Sbjct: 247 EKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVT---ASHPFMTAVDLM 303

Query: 521 QLAKECTDDTIANII 565
           + ++ C+ D+ ANI+
Sbjct: 304 EASQLCSMDSKANIV 318


>AF132596-1|AAD22110.1|  436|Homo sapiens origin recognition complex
           subunit 4 protein.
          Length = 436

 Score = 31.9 bits (69), Expect = 2.0
 Identities = 22/75 (29%), Positives = 37/75 (49%)
 Frame = +2

Query: 341 EKMYRQTALHKSQRHLQLILWRDSSLSTEPNKNDNLKILQLNTVTYGLASAPFLSTRCLL 520
           EK           R +Q +L +  ++S        L +L LN VT   AS PF++   L+
Sbjct: 247 EKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVT---ASHPFMTAVDLM 303

Query: 521 QLAKECTDDTIANII 565
           + ++ C+ D+ ANI+
Sbjct: 304 EASQLCSMDSKANIV 318


>AF047598-1|AAC80282.1|  436|Homo sapiens origin recognition complex
           subunit 4 protein.
          Length = 436

 Score = 31.9 bits (69), Expect = 2.0
 Identities = 22/75 (29%), Positives = 37/75 (49%)
 Frame = +2

Query: 341 EKMYRQTALHKSQRHLQLILWRDSSLSTEPNKNDNLKILQLNTVTYGLASAPFLSTRCLL 520
           EK           R +Q +L +  ++S        L +L LN VT   AS PF++   L+
Sbjct: 247 EKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVT---ASHPFMTAVDLM 303

Query: 521 QLAKECTDDTIANII 565
           + ++ C+ D+ ANI+
Sbjct: 304 EASQLCSMDSKANIV 318


>AF022108-1|AAC01957.1|  436|Homo sapiens putative replication
           initiator origin recognition complex subunit Orc4Lp
           protein.
          Length = 436

 Score = 31.9 bits (69), Expect = 2.0
 Identities = 22/75 (29%), Positives = 37/75 (49%)
 Frame = +2

Query: 341 EKMYRQTALHKSQRHLQLILWRDSSLSTEPNKNDNLKILQLNTVTYGLASAPFLSTRCLL 520
           EK           R +Q +L +  ++S        L +L LN VT   AS PF++   L+
Sbjct: 247 EKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVT---ASHPFMTAVDLM 303

Query: 521 QLAKECTDDTIANII 565
           + ++ C+ D+ ANI+
Sbjct: 304 EASQLCSMDSKANIV 318


>AC009480-1|AAX93051.1|  290|Homo sapiens unknown protein.
          Length = 290

 Score = 31.9 bits (69), Expect = 2.0
 Identities = 22/75 (29%), Positives = 37/75 (49%)
 Frame = +2

Query: 341 EKMYRQTALHKSQRHLQLILWRDSSLSTEPNKNDNLKILQLNTVTYGLASAPFLSTRCLL 520
           EK           R +Q +L +  ++S        L +L LN VT   AS PF++   L+
Sbjct: 101 EKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVT---ASHPFMTAVDLM 157

Query: 521 QLAKECTDDTIANII 565
           + ++ C+ D+ ANI+
Sbjct: 158 EASQLCSMDSKANIV 172


>BC041868-1|AAH41868.1|  824|Homo sapiens VPS54 protein protein.
          Length = 824

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 13/53 (24%), Positives = 30/53 (56%)
 Frame = -2

Query: 326 EQIGDRENVTKLRINQTALLDLQPVCHLTTSQMMFWLRHQTLLSISSFHCSRE 168
           E++   E +T  R+ +T +LD + +C   ++ ++  L+ Q +  ++ FH  R+
Sbjct: 475 EKLNSMEFITLSRLMETFILDTEQICGRKSTSLLGALQSQAIKFVNRFHEERK 527


>BC030275-1|AAH30275.1|  965|Homo sapiens vacuolar protein sorting
           54 homolog (S. cerevisiae) protein.
          Length = 965

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 13/53 (24%), Positives = 30/53 (56%)
 Frame = -2

Query: 326 EQIGDRENVTKLRINQTALLDLQPVCHLTTSQMMFWLRHQTLLSISSFHCSRE 168
           E++   E +T  R+ +T +LD + +C   ++ ++  L+ Q +  ++ FH  R+
Sbjct: 616 EKLNSMEFITLSRLMETFILDTEQICGRKSTSLLGALQSQAIKFVNRFHEERK 668


>AY444798-1|AAS20945.1|  977|Homo sapiens vacuolar sorting protein
           54 long isoform protein.
          Length = 977

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 13/53 (24%), Positives = 30/53 (56%)
 Frame = -2

Query: 326 EQIGDRENVTKLRINQTALLDLQPVCHLTTSQMMFWLRHQTLLSISSFHCSRE 168
           E++   E +T  R+ +T +LD + +C   ++ ++  L+ Q +  ++ FH  R+
Sbjct: 628 EKLNSMEFITLSRLMETFILDTEQICGRKSTSLLGALQSQAIKFVNRFHEERK 680


>AK002205-1|BAA92134.1|  398|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11343 fis, clone PLACE1010811. ).
          Length = 398

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 13/53 (24%), Positives = 30/53 (56%)
 Frame = -2

Query: 326 EQIGDRENVTKLRINQTALLDLQPVCHLTTSQMMFWLRHQTLLSISSFHCSRE 168
           E++   E +T  R+ +T +LD + +C   ++ ++  L+ Q +  ++ FH  R+
Sbjct: 49  EKLNSMEFITLSRLMETFILDTEQICGRKSTSLLGALQSQAIKFVNRFHEERK 101


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,048,815
Number of Sequences: 237096
Number of extensions: 1591983
Number of successful extensions: 2835
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2833
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)