Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6l08
         (645 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF014939-4|AAB63932.1| 1277|Caenorhabditis elegans Hypothetical ...    94   9e-20
Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical pr...    68   5e-12
AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical...    68   5e-12
AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical ...    65   4e-11
U64843-1|AAF98232.1| 1067|Caenorhabditis elegans Hypothetical pr...    38   0.006
Z78412-2|CAB01650.1|  169|Caenorhabditis elegans Hypothetical pr...    27   8.6  
Z66567-2|CAA91488.1| 1118|Caenorhabditis elegans Hypothetical pr...    27   8.6  

>AF014939-4|AAB63932.1| 1277|Caenorhabditis elegans Hypothetical
           protein ZC132.5 protein.
          Length = 1277

 Score = 93.9 bits (223), Expect = 9e-20
 Identities = 57/160 (35%), Positives = 83/160 (51%), Gaps = 1/160 (0%)
 Frame = +2

Query: 143 NYLPHHCVLRENSETTKLRVVFDASAKTSSGKSLNDIQAVGPVVQSDLFSILLRFRGHRF 322
           +Y PH  VL     TTK RVV D SA   +  SLND    GP +  D  S+  RFR  + 
Sbjct: 206 HYNPHSPVLTPQKTTTKCRVVIDGSAHFKNEPSLNDAIYQGPTILPD--SVDTRFRSGKT 263

Query: 323 VLLGDIEKMYRQTALHKSQRHLQLILW-RDSSLSTEPNKNDNLKILQLNTVTYGLASAPF 499
           VLL D+EK + Q  L++S R +  +LW ++  L   P   +NL++L+   V +GL  +PF
Sbjct: 264 VLLADVEKAFLQVHLNESDRDVTRVLWVKNPDL---PPTRENLRVLRFTRVLFGLNVSPF 320

Query: 500 LSTRCLLQLAKECTDDTIANIIKNDFYIDDLNTGANSQNE 619
           L    +L       D  +AN I  + Y+D+L    +  +E
Sbjct: 321 LLGATILFHLDRMEDKKLANTIARNLYVDNLIIATDDDSE 360


>Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical protein
            F15D4.7 protein.
          Length = 2268

 Score = 68.1 bits (159), Expect = 5e-12
 Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 5/103 (4%)
 Frame = +2

Query: 74   YTKFIDEYKELGHLSEVD---RPR--FGNYLPHHCVLRENSETTKLRVVFDASAKTSSGK 238
            Y K + +  E G + EV     P     NYLPH  V++E+S TTKLR+V+D S+      
Sbjct: 1137 YDKILQDQLESGIIEEVTGEMEPENVLLNYLPHRVVVKESSNTTKLRIVYDGSSHAKGVP 1196

Query: 239  SLNDIQAVGPVVQSDLFSILLRFRGHRFVLLGDIEKMYRQTAL 367
            S+ND    GP     +  I++R R H+++++ D+EK   + AL
Sbjct: 1197 SVNDALFPGPSTLQPIPGIIMRARTHKYLVIADVEKHSTKFAL 1239


>AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical
            protein F15D4.7 protein.
          Length = 2268

 Score = 68.1 bits (159), Expect = 5e-12
 Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 5/103 (4%)
 Frame = +2

Query: 74   YTKFIDEYKELGHLSEVD---RPR--FGNYLPHHCVLRENSETTKLRVVFDASAKTSSGK 238
            Y K + +  E G + EV     P     NYLPH  V++E+S TTKLR+V+D S+      
Sbjct: 1137 YDKILQDQLESGIIEEVTGEMEPENVLLNYLPHRVVVKESSNTTKLRIVYDGSSHAKGVP 1196

Query: 239  SLNDIQAVGPVVQSDLFSILLRFRGHRFVLLGDIEKMYRQTAL 367
            S+ND    GP     +  I++R R H+++++ D+EK   + AL
Sbjct: 1197 SVNDALFPGPSTLQPIPGIIMRARTHKYLVIADVEKHSTKFAL 1239


>AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical
            protein R52.2 protein.
          Length = 1019

 Score = 65.3 bits (152), Expect = 4e-11
 Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
 Frame = +2

Query: 146  YLPHHCVLRENSETTKLRVVFDASAK-TSSGKSLNDIQAVGPVVQSDLFSILLRFRGHRF 322
            YL HH V++  S +TK+R+V+D SA+ T + KSLN I   G  +  +L  +LLR R    
Sbjct: 855  YLSHHPVIKPTSTSTKVRIVYDGSARATKTSKSLNAILHTGESLLPNLTGVLLRIRQPSI 914

Query: 323  VLLGDIEKMYRQTALHKSQRHLQLILWRDSSLSTE 427
            ++  D+EK + Q  LH         LW+  +  T+
Sbjct: 915  LVSSDLEKAFLQLGLHHEDHDFCRFLWQPWNPGTQ 949


>U64843-1|AAF98232.1| 1067|Caenorhabditis elegans Hypothetical
           protein K06C4.15 protein.
          Length = 1067

 Score = 37.9 bits (84), Expect = 0.006
 Identities = 16/27 (59%), Positives = 23/27 (85%), Gaps = 1/27 (3%)
 Frame = +2

Query: 143 NY-LPHHCVLRENSETTKLRVVFDASA 220
           NY +PH  V++E+S TTK+RVV+DAS+
Sbjct: 818 NYNMPHRAVIKESSNTTKVRVVYDASS 844


>Z78412-2|CAB01650.1|  169|Caenorhabditis elegans Hypothetical
           protein M176.3 protein.
          Length = 169

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
 Frame = +2

Query: 434 KNDNLKILQLNT-VTYGLASAPFLSTRCLLQLAKECTDDTIANIIKNDFYIDDLNTGANS 610
           + D  K+ QL    T G+++AP   +   L+  K+  DDT+  + K  F     N   ++
Sbjct: 70  REDMAKLSQLQQRKTAGISAAPVSISGNDLEERKKIFDDTVERVQKQFFAYHRENVCQDN 129

Query: 611 QNEL 622
           +NE+
Sbjct: 130 ENEI 133


>Z66567-2|CAA91488.1| 1118|Caenorhabditis elegans Hypothetical
           protein ZK455.2 protein.
          Length = 1118

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -1

Query: 495 GALANPYVTVFNCRIFKLSFLFGSVLRD 412
           G LAN Y T+    ++   FL+G  LRD
Sbjct: 347 GVLANHYATLSYMSLYDALFLYGLALRD 374


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,443,578
Number of Sequences: 27780
Number of extensions: 268960
Number of successful extensions: 725
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 722
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)