Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6l07
         (721 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   2.5  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   4.4  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    22   4.4  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    22   4.4  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   5.8  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    22   5.8  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   7.6  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +3

Query: 417 SKHFAFELVFCNFLLRSFITLVKSDGGLASGKDFN 521
           S H A++      + R  +   K+D G+ SG DF+
Sbjct: 30  SPHTAWQFGVSQIVKREPMDEDKNDSGVTSGSDFH 64


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/13 (61%), Positives = 12/13 (92%)
 Frame = -2

Query: 84  ISTILLPVRPPVT 46
           +++ LLPVRPP+T
Sbjct: 358 VTSGLLPVRPPLT 370


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = -1

Query: 532 KQPTLKSLPDARPPSLLTSVMNERKRKLQNTNS 434
           K+   +S  + +  SL   + N  KRK++NT++
Sbjct: 332 KRRNRESTTNTQSSSLSEFLTNTHKRKIENTST 364


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 184 VFNFCYDCVILYVIGCDLV 240
           VF +    VIL ++GCD+V
Sbjct: 217 VFVYTLVSVILIIMGCDVV 235


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +1

Query: 160 RICFSSVRVFNFCYDCVILYVIGCDLVKPRN 252
           +I    V +F   Y C+  Y+   ++V P+N
Sbjct: 245 KIASQFVGIFCSLYFCIFGYIYDDEMVVPQN 275


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +1

Query: 160 RICFSSVRVFNFCYDCVILYVIGCDLVKPRN 252
           +I    V +F   Y C+  Y+   ++V P+N
Sbjct: 70  KIASQFVGIFCSLYFCIFGYIYDDEMVVPQN 100


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +1

Query: 169 FSSVRVFNFCYDCVILYVIG 228
           F  ++V  +CY   ++Y+IG
Sbjct: 210 FKIIQVVPYCYINCLIYLIG 229


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,478
Number of Sequences: 336
Number of extensions: 2590
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)