Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc6k19
(656 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6AW70 Cluster: Coat protein; n=1; Bombyx mori Macula-l... 113 4e-24
UniRef50_Q8UZB5 Cluster: Coat protein; n=1; Grapevine fleck viru... 36 0.65
UniRef50_Q71EB5 Cluster: 25kDa coat protein; n=1; Grapevine Red ... 35 1.5
UniRef50_Q1QHE7 Cluster: OmpA/MotB precursor; n=2; Nitrobacter|R... 35 2.0
UniRef50_UPI00003654E6 Cluster: Ankyrin repeat domain-containing... 34 3.5
UniRef50_Q5XL24 Cluster: pH-response transcription factor pacC/R... 33 4.6
UniRef50_Q8DM37 Cluster: Tll0286 protein; n=1; Synechococcus elo... 33 6.0
UniRef50_A4TWK0 Cluster: Glutamine synthetase adenylyltransferas... 33 6.0
UniRef50_A7E3J6 Cluster: Putative DUX4 protein; n=1; Procavia ca... 33 6.0
UniRef50_UPI0000499027 Cluster: hypothetical protein 189.t00012;... 33 8.0
UniRef50_Q5D5G3 Cluster: Phage tail sheath protein; n=1; Wolbach... 33 8.0
UniRef50_A1VBF1 Cluster: Polypeptide-transport-associated domain... 33 8.0
UniRef50_Q2WBY1 Cluster: Fork head protein; n=1; Platynereis dum... 33 8.0
UniRef50_Q0V1A0 Cluster: Putative uncharacterized protein; n=1; ... 33 8.0
>UniRef50_Q6AW70 Cluster: Coat protein; n=1; Bombyx mori Macula-like
latent virus|Rep: Coat protein - Bombyx mori Macula-like
latent virus
Length = 237
Score = 113 bits (272), Expect = 4e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +1
Query: 1 IIKSPIPYTNHPRLNIHFHQSPDAVLEGIRAGVKASVVIRGSISVSHPLVTGHG 162
IIKSPIPYTNHPRLNIHFHQS DAVLEG+RAGVKASVVIRGSISVSHPLVTGHG
Sbjct: 184 IIKSPIPYTNHPRLNIHFHQSADAVLEGVRAGVKASVVIRGSISVSHPLVTGHG 237
>UniRef50_Q8UZB5 Cluster: Coat protein; n=1; Grapevine fleck
virus|Rep: Coat protein - Grapevine fleck virus
Length = 230
Score = 36.3 bits (80), Expect = 0.65
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +1
Query: 4 IKSPIPYTNHPRLNIHFHQSPDAVLEGIRAGVKASVVIRGSISVSHPL 147
IK + YT+ PRL F+++ V G A + S++IRG I S P+
Sbjct: 176 IKDSVTYTDCPRLTCGFYRNDACVALGSSAPICGSILIRGVIECSAPI 223
>UniRef50_Q71EB5 Cluster: 25kDa coat protein; n=1; Grapevine Red
Globe virus|Rep: 25kDa coat protein - Grapevine Red
Globe virus
Length = 235
Score = 35.1 bits (77), Expect = 1.5
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +1
Query: 1 IIKSPIPYTNHPRLNIHFHQSPDAVLEGIRAGV-KASVVIRGSISVS 138
++K + Y N P+L + FH++ DA + V S+VIRG + S
Sbjct: 179 VVKDTVSYNNTPKLTVAFHKNTDAPAVSVTTPVIYGSIVIRGVVRCS 225
>UniRef50_Q1QHE7 Cluster: OmpA/MotB precursor; n=2; Nitrobacter|Rep:
OmpA/MotB precursor - Nitrobacter hamburgensis (strain
X14 / DSM 10229)
Length = 673
Score = 34.7 bits (76), Expect = 2.0
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Frame = +2
Query: 11 PRFHTPTTPDLTSIS--INPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMAKGVSPP 181
P TP PD+T S P TP +P PP + AP+A P+ K +PP
Sbjct: 242 PGSTTPAAPDVTPTSPRATPATPSAPVASPAATPPSGAAAPAAATPPTGPAGTKAGTPP 300
>UniRef50_UPI00003654E6 Cluster: Ankyrin repeat domain-containing
protein 13B.; n=1; Takifugu rubripes|Rep: Ankyrin repeat
domain-containing protein 13B. - Takifugu rubripes
Length = 634
Score = 33.9 bits (74), Expect = 3.5
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +3
Query: 411 PSCYFSTPPFDTVLYDNIRTVLKDNKTALLSASIQASL 524
PSC F PP TVL R L++++ LL +IQ SL
Sbjct: 506 PSCVFEVPPGYTVLGSKQRDTLREDEEDLLQFAIQQSL 543
>UniRef50_Q5XL24 Cluster: pH-response transcription factor
pacC/RIM101; n=15; Pezizomycotina|Rep: pH-response
transcription factor pacC/RIM101 - Aspergillus giganteus
Length = 678
Score = 33.5 bits (73), Expect = 4.6
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +2
Query: 2 SSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMAKGVSPP 181
S P H T ++ +P T P L PP S+++ ++ +P S+ A VSPP
Sbjct: 394 SQLPPSHATATTSAATMMSHPATHSPSTGTPALTPPSSAQSYTSGRSPISMSSAHRVSPP 453
Query: 182 Y 184
+
Sbjct: 454 H 454
>UniRef50_Q8DM37 Cluster: Tll0286 protein; n=1; Synechococcus
elongatus|Rep: Tll0286 protein - Synechococcus elongatus
(Thermosynechococcus elongatus)
Length = 158
Score = 33.1 bits (72), Expect = 6.0
Identities = 20/75 (26%), Positives = 33/75 (44%)
Frame = +3
Query: 210 LRALLVVIPRILRSPPPTHPLIEDVVMATNQAIIDYKVKIADNNLVTHKELALKVSSIIG 389
L LL+VIP L P +H +I + A NQ ++ + + DN T + + +
Sbjct: 8 LLLLLLVIPLWLAVSPRSHAMIRTIEEAPNQVVVQSRHPLRDNRGFTWQVILFSRPDQLQ 67
Query: 390 TRVYVFDPSCYFSTP 434
R+ F +F P
Sbjct: 68 LRLVGFPEQYHFRHP 82
>UniRef50_A4TWK0 Cluster: Glutamine synthetase adenylyltransferase;
n=3; Magnetospirillum|Rep: Glutamine synthetase
adenylyltransferase - Magnetospirillum gryphiswaldense
Length = 1137
Score = 33.1 bits (72), Expect = 6.0
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +3
Query: 156 AWLKGFRPLIFK*MMNHKLRALLVVIPRILRSPPPTHPLIEDVVMATNQA 305
A L G P + + + H + VV P PPPT LIED+ A ++A
Sbjct: 728 AELMGNAPKLAEHLARHTTQLDAVVAPSFFEPPPPTERLIEDLNKALSEA 777
>UniRef50_A7E3J6 Cluster: Putative DUX4 protein; n=1; Procavia
capensis|Rep: Putative DUX4 protein - Procavia capensis
(Cape hyrax) (Rock dassie)
Length = 481
Score = 33.1 bits (72), Expect = 6.0
Identities = 17/31 (54%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +2
Query: 92 PGLKPPLSSEAPSAYLT-PSSLGMAKGVSPP 181
PG + P EAPSA T PSS MA G++PP
Sbjct: 303 PGPRAPAGGEAPSAPQTLPSSQPMANGLAPP 333
>UniRef50_UPI0000499027 Cluster: hypothetical protein 189.t00012;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 189.t00012 - Entamoeba histolytica HM-1:IMSS
Length = 713
Score = 32.7 bits (71), Expect = 8.0
Identities = 16/48 (33%), Positives = 30/48 (62%)
Frame = +3
Query: 228 VIPRILRSPPPTHPLIEDVVMATNQAIIDYKVKIADNNLVTHKELALK 371
+I RIL S P + L ED+ N+++++ +++ +N+ T+ LALK
Sbjct: 117 IIMRILNSMPDNYTLTEDIYKKINKSLVE-RLQDTQSNVRTYAVLALK 163
>UniRef50_Q5D5G3 Cluster: Phage tail sheath protein; n=1; Wolbachia
endosymbiont of Drosophila mojavensis|Rep: Phage tail
sheath protein - Wolbachia endosymbiont of Drosophila
mojavensis
Length = 296
Score = 32.7 bits (71), Expect = 8.0
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Frame = +3
Query: 216 ALLVVIPRILRSPPPTHPLIEDVVMATNQAIIDYKVK----IADNNLVTHKELALKVSSI 383
+++ V+PRIL +P TH L ED A++ K I + T+ E A+K
Sbjct: 102 SIVHVLPRILIAPQFTHQLPEDGKNPAVAALVPIAEKLRSIIVADGPNTNDEEAIKWRKS 161
Query: 384 IG-TRVYVFDP 413
+G +RVYV DP
Sbjct: 162 VGSSRVYVVDP 172
>UniRef50_A1VBF1 Cluster: Polypeptide-transport-associated domain
protein, FtsQ-type precursor; n=2; Desulfovibrio
vulgaris subsp. vulgaris|Rep:
Polypeptide-transport-associated domain protein,
FtsQ-type precursor - Desulfovibrio vulgaris subsp.
vulgaris (strain DP4)
Length = 278
Score = 32.7 bits (71), Expect = 8.0
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -1
Query: 614 NKGLRFYVDSKGVGRNMARICQLAVDLGGR 525
N GLR V + +G N+ R+CQ+ DLG R
Sbjct: 224 NPGLRISVAPENLGGNLDRLCQVLADLGRR 253
>UniRef50_Q2WBY1 Cluster: Fork head protein; n=1; Platynereis
dumerilii|Rep: Fork head protein - Platynereis dumerilii
(Dumeril's clam worm)
Length = 517
Score = 32.7 bits (71), Expect = 8.0
Identities = 22/62 (35%), Positives = 33/62 (53%)
Frame = +2
Query: 2 SSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMAKGVSPP 181
S+NP TPT+ LTS S++ L+ L PLS + +A+ +GMA G+ P
Sbjct: 398 STNPNVSTPTSHPLTSTSVSELS--------ALTRPLSHDNAAAH-HAVMMGMASGLGGP 448
Query: 182 YF 187
+F
Sbjct: 449 HF 450
>UniRef50_Q0V1A0 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 1581
Score = 32.7 bits (71), Expect = 8.0
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +2
Query: 89 APGLKPPLSSEAPSAYLTPSSLGMAKGVSPPYFQVNDESQA 211
AP PP SSEAPS+ + L + SPP SQA
Sbjct: 620 APSSAPPASSEAPSSAPPSTQLASSDAPSPPASSAQGSSQA 660
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 654,282,655
Number of Sequences: 1657284
Number of extensions: 12992969
Number of successful extensions: 39122
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 37284
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39050
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49586781480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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