Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc6k14
(687 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC776.02c |dis2|sds1, bws1|serine/threonine protein phosphatas... 429 e-121
SPCC31H12.05c |sds21||serine/threonine protein phosphatase Sds21... 405 e-114
SPAC57A7.08 |pzh1||serine/threonine protein phosphatase Pzh1|Sch... 323 2e-89
SPBC16H5.07c |ppa2||serine/threonine protein phosphatase Ppa2|Sc... 229 2e-61
SPAC823.15 |ppa1||minor serine/threonine protein phosphatase Ppa... 227 2e-60
SPBC26H8.05c |||serine/threonine protein phosphatase |Schizosacc... 213 2e-56
SPAC22H10.04 |||protein phosphatase type 2A|Schizosaccharomyces ... 211 6e-56
SPCC1739.12 |ppe1|esp1, ppx1|serine/threonine protein phosphatas... 205 4e-54
SPBP4H10.04 |ppb1||calcineurin catalytic subunit Ppb1|Schizosacc... 200 2e-52
SPBC3F6.01c |||serine/threonine protein phosphatase |Schizosacch... 146 2e-36
SPAC688.10 |rev3||DNA polymerase zeta catalytic subunit Rev3|Sch... 29 0.48
SPAC20H4.08 |||phosphatase activator |Schizosaccharomyces pombe|... 28 1.1
SPCC1235.03 |||SMR and CUE domain protein|Schizosaccharomyces po... 28 1.5
SPBC359.02 |alr2||alanine racemase Alr2 |Schizosaccharomyces pom... 26 4.4
SPCC1183.05c |lig4||DNA ligase Lig4|Schizosaccharomyces pombe|ch... 26 4.4
SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr 2... 26 4.4
SPAC823.12 |||zinc finger protein Pep5/Vps11 |Schizosaccharomyce... 26 5.9
SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual 25 7.8
SPCC16C4.18c |taf50||histone H4-like TAF |Schizosaccharomyces po... 25 7.8
>SPBC776.02c |dis2|sds1, bws1|serine/threonine protein phosphatase
PP1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 327
Score = 429 bits (1057), Expect = e-121
Identities = 191/220 (86%), Positives = 206/220 (93%)
Frame = +2
Query: 26 ELNVDSLIHRLLEVRGCRPGKTVQMSEAEVRGLCTKSREIFLQQPILLELEAPLKICGDI 205
++++DS+I RLLEVRG RPG+ VQ+SE E+R LC K+REIF+ QPILLELEAPLKICGDI
Sbjct: 5 DVDLDSIIDRLLEVRGSRPGRQVQLSEDEIRFLCNKAREIFISQPILLELEAPLKICGDI 64
Query: 206 HGQYTDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNH 385
HGQY DLLRLFEYGGFPPEANYLFLGDYVDRGKQSLE ICLLLAYKIKYPENFF+LRGNH
Sbjct: 65 HGQYYDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLEVICLLLAYKIKYPENFFILRGNH 124
Query: 386 ECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQGMEQ 565
ECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIIDEKIF HGGLSPDL M+Q
Sbjct: 125 ECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIIDEKIFTMHGGLSPDLNSMDQ 184
Query: 566 IRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSF 685
I+RIMRPTDVPDTGLLCDLLWSDPDKD+ GWG+NDRGVSF
Sbjct: 185 IQRIMRPTDVPDTGLLCDLLWSDPDKDLTGWGDNDRGVSF 224
>SPCC31H12.05c |sds21||serine/threonine protein phosphatase
Sds21|Schizosaccharomyces pombe|chr 3|||Manual
Length = 322
Score = 405 bits (996), Expect = e-114
Identities = 173/220 (78%), Positives = 202/220 (91%)
Frame = +2
Query: 26 ELNVDSLIHRLLEVRGCRPGKTVQMSEAEVRGLCTKSREIFLQQPILLELEAPLKICGDI 205
+ ++D++I +L++ R +P K VQ+S+AE+R LCT SR IFL QP+LLELEAPLKICGDI
Sbjct: 2 DYDIDAIIEKLVKARNGKPSKQVQLSDAEIRYLCTTSRSIFLSQPMLLELEAPLKICGDI 61
Query: 206 HGQYTDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNH 385
HGQY+DLLRLFEYGG+PP+ANYLFLGDYVDRGKQSLE ICLL AYKIKYPENFFLLRGNH
Sbjct: 62 HGQYSDLLRLFEYGGYPPDANYLFLGDYVDRGKQSLEVICLLFAYKIKYPENFFLLRGNH 121
Query: 386 ECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQGMEQ 565
E ASINRIYGFYDECKRRY+IKLWKTFTDCFNC+P+AA+IDEKIFC HGGLSPDL ++Q
Sbjct: 122 EFASINRIYGFYDECKRRYSIKLWKTFTDCFNCMPVAAVIDEKIFCMHGGLSPDLNSLDQ 181
Query: 566 IRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSF 685
I+RI+RPTD+PDTGLLCDL+WSDP+KD+ GWGENDRGVS+
Sbjct: 182 IQRIIRPTDIPDTGLLCDLVWSDPEKDLTGWGENDRGVSY 221
>SPAC57A7.08 |pzh1||serine/threonine protein phosphatase
Pzh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 515
Score = 323 bits (793), Expect = 2e-89
Identities = 148/220 (67%), Positives = 170/220 (77%), Gaps = 1/220 (0%)
Frame = +2
Query: 29 LNVDSLIHRLLEVRGCRPG-KTVQMSEAEVRGLCTKSREIFLQQPILLELEAPLKICGDI 205
LNVD +I RL+ V R K+V + AE+ +C REIFL QP LLEL P+KI GD+
Sbjct: 190 LNVDEMIQRLIHVGYSRKSSKSVCLKNAEITSICMAVREIFLSQPTLLELTPPVKIVGDV 249
Query: 206 HGQYTDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNH 385
HGQY+DL+RLFE GFPP +NYLFLGDYVDRGKQSLETI LL YKI+YPENFFLLRGNH
Sbjct: 250 HGQYSDLIRLFEMCGFPPSSNYLFLGDYVDRGKQSLETILLLFLYKIRYPENFFLLRGNH 309
Query: 386 ECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQGMEQ 565
ECA+I R+YGFYDECKRR NIK+WKTF + FNCLPIA+++ KIFC HGGLSP L M+
Sbjct: 310 ECANITRVYGFYDECKRRCNIKIWKTFINTFNCLPIASVVAGKIFCVHGGLSPSLSHMDD 369
Query: 566 IRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSF 685
IR I RPTDVPD GLL DLLWSDP W +N+RGVSF
Sbjct: 370 IREIPRPTDVPDYGLLNDLLWSDPADTENDWEDNERGVSF 409
>SPBC16H5.07c |ppa2||serine/threonine protein phosphatase
Ppa2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 229 bits (561), Expect = 2e-61
Identities = 99/201 (49%), Positives = 140/201 (69%), Gaps = 1/201 (0%)
Frame = +2
Query: 86 KTVQMSEAEVRGLCTKSREIFLQQPILLELEAPLKICGDIHGQYTDLLRLFEYGGFPPEA 265
K +SEA+V LC K+RE+ Q+ + + P+ +CGDIHGQ+ DL+ LF+ GG P+
Sbjct: 32 KCEPLSEADVEMLCDKAREVLCQENNVQPVRNPVTVCGDIHGQFHDLMELFKIGGDVPDM 91
Query: 266 NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY- 442
NYLF+GDYVDRG S+ET+ LL+A K++YP +LRGNHE I ++YGFYDEC R+Y
Sbjct: 92 NYLFMGDYVDRGYHSVETVSLLVAMKLRYPNRITILRGNHESRQITQVYGFYDECLRKYG 151
Query: 443 NIKLWKTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQGMEQIRRIMRPTDVPDTGLLCDL 622
+ +WK FT+ F+ P+ A+I+++IFC HGGLSP + ++ +R + R +VP G +CDL
Sbjct: 152 SANVWKHFTNLFDYFPLTALIEDRIFCLHGGLSPSIDSLDHVRTLDRVQEVPHEGPMCDL 211
Query: 623 LWSDPDKDVQGWGENDRGVSF 685
LWSDPD D GWG + RG +
Sbjct: 212 LWSDPD-DRCGWGISPRGAGY 231
>SPAC823.15 |ppa1||minor serine/threonine protein phosphatase
Ppa1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 309
Score = 227 bits (554), Expect = 2e-60
Identities = 96/197 (48%), Positives = 138/197 (70%), Gaps = 1/197 (0%)
Frame = +2
Query: 98 MSEAEVRGLCTKSREIFLQQPILLELEAPLKICGDIHGQYTDLLRLFEYGGFPPEANYLF 277
+SE +V +C ++E+ + + + P+ +CGDIHGQ+ DL+ LF GG P+ NYLF
Sbjct: 23 LSEEDVIQMCDLAKEVLSVESNVQSVRCPVTVCGDIHGQFHDLMELFNIGGPSPDTNYLF 82
Query: 278 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKL 454
+GDYVDRG S+ET+ LL+A+KI+YP+ +LRGNHE I ++YGFYDEC R+Y N +
Sbjct: 83 MGDYVDRGYHSVETVSLLIAFKIRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANV 142
Query: 455 WKTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQGMEQIRRIMRPTDVPDTGLLCDLLWSD 634
W+ FTD F+ LP+ A+I+++IFC HGGLSP + ++ +R + R +VP G +CDLLWSD
Sbjct: 143 WQYFTDLFDYLPLTALIEDRIFCLHGGLSPSIDTLDHVRILDRVQEVPHEGPICDLLWSD 202
Query: 635 PDKDVQGWGENDRGVSF 685
PD D GWG + RG +
Sbjct: 203 PD-DRPGWGISPRGAGY 218
>SPBC26H8.05c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 348
Score = 213 bits (521), Expect = 2e-56
Identities = 95/195 (48%), Positives = 130/195 (66%), Gaps = 1/195 (0%)
Frame = +2
Query: 104 EAEVRGLCTKSREIFLQQPILLELEAPLKICGDIHGQYTDLLRLFEYGGFPPEANYLFLG 283
E+ V LC + R+I +++ + + +P+ ICGDIHGQ DLL LF GG P YLFLG
Sbjct: 21 ESNVVELCQRVRDILIEESNIQWISSPVTICGDIHGQLHDLLELFRIGGSCPGTKYLFLG 80
Query: 284 DYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKLWK 460
D+VDRG S+ET LLL K KYP+ L+RGNHE I ++YGFYDEC R+Y + +W+
Sbjct: 81 DFVDRGFYSVETFLLLLTLKCKYPKEMTLIRGNHESRQITQVYGFYDECVRKYGSANVWR 140
Query: 461 TFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQGMEQIRRIMRPTDVPDTGLLCDLLWSDPD 640
+ F+ L + A++D K+FC HGGLSP + ++QIR + R +VP G +CDLLWSDP+
Sbjct: 141 YCCEIFDYLSLGALVDGKVFCVHGGLSPSISSIDQIRLLDRKQEVPHEGAMCDLLWSDPE 200
Query: 641 KDVQGWGENDRGVSF 685
D+ GWG + RG F
Sbjct: 201 -DISGWGLSPRGAGF 214
>SPAC22H10.04 |||protein phosphatase type 2A|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 307
Score = 211 bits (516), Expect = 6e-56
Identities = 100/220 (45%), Positives = 143/220 (65%), Gaps = 1/220 (0%)
Frame = +2
Query: 29 LNVDSLIHRLLEVRGCRPGKTVQMSEAEVRGLCTKSREIFLQQPILLELEAPLKICGDIH 208
+++D++I RL E + ++E+ + LC+ ++E+ +Q+ ++ L P+ + GDIH
Sbjct: 2 IDLDNIIERLYEKQ--------LIAESVIAYLCSLAKEVLMQESNVVRLSTPITVVGDIH 53
Query: 209 GQYTDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 388
GQ+ DLL +F GG P NYLFLGDYVDRG S+ETI LL+ K++YP+ LLRGNHE
Sbjct: 54 GQFDDLLEIFRIGGPCPYTNYLFLGDYVDRGYYSIETITLLICLKLRYPKRITLLRGNHE 113
Query: 389 CASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQGMEQ 565
I + YGFY EC R+Y N +WK FTD F+ L ++A ID+ IFC HGGLSP +Q ++Q
Sbjct: 114 SRGITQTYGFYSECLRKYGNANVWKYFTDIFDFLTLSATIDDTIFCVHGGLSPSIQHIDQ 173
Query: 566 IRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSF 685
I + R + P G + DL+WSDPD VQ + + RG F
Sbjct: 174 ILVLDRFREFPHEGPMADLVWSDPDPSVQEFSLSPRGAGF 213
>SPCC1739.12 |ppe1|esp1, ppx1|serine/threonine protein phosphatase
Ppe1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 305
Score = 205 bits (501), Expect = 4e-54
Identities = 89/201 (44%), Positives = 130/201 (64%), Gaps = 1/201 (0%)
Frame = +2
Query: 86 KTVQMSEAEVRGLCTKSREIFLQQPILLELEAPLKICGDIHGQYTDLLRLFEYGGFPPEA 265
K + E +++ LC + I +++ + + P+ +CGDIHGQ+ DLL LF GG P
Sbjct: 13 KCKYLPEHQLKRLCEMVKVILMEESNIQPVRTPVTVCGDIHGQFYDLLELFRVGGELPST 72
Query: 266 NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY- 442
NY+F+GD+VDRG SLET L + K +YP+ LLRGNHE I ++YGFYDEC+ +Y
Sbjct: 73 NYIFMGDFVDRGYFSLETFTLFMLLKARYPDKITLLRGNHESRQITQVYGFYDECQTKYG 132
Query: 443 NIKLWKTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQGMEQIRRIMRPTDVPDTGLLCDL 622
N +WK F+ L +AA+ID KI C HGGLSP+++ ++QIR + R ++P G CDL
Sbjct: 133 NANVWKYCCQVFDFLTLAAVIDNKILCVHGGLSPEVRTLDQIRILARAQEIPHEGSFCDL 192
Query: 623 LWSDPDKDVQGWGENDRGVSF 685
+WSDP+ D++ W + RG +
Sbjct: 193 MWSDPE-DIESWTVSPRGAGW 212
>SPBP4H10.04 |ppb1||calcineurin catalytic subunit
Ppb1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 554
Score = 200 bits (488), Expect = 2e-52
Identities = 91/184 (49%), Positives = 124/184 (67%)
Frame = +2
Query: 95 QMSEAEVRGLCTKSREIFLQQPILLELEAPLKICGDIHGQYTDLLRLFEYGGFPPEANYL 274
++SE + + K+ EI + L+E++AP+ +CGDIHGQY DL++LFE GG P YL
Sbjct: 84 RLSEEQTLYIIKKATEILKSEDNLIEVDAPVTVCGDIHGQYYDLMKLFEVGGNPANTQYL 143
Query: 275 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKL 454
FLGDYVDRG S+E + L A KI YP+ +LLRGNHECA + + F EC +YNIK+
Sbjct: 144 FLGDYVDRGYFSIECLLYLWALKIWYPKTLWLLRGNHECAHLTDYFTFKLECTHKYNIKV 203
Query: 455 WKTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQGMEQIRRIMRPTDVPDTGLLCDLLWSD 634
++ FN LP+AAI++++ C HGGLSP+L + IR I R + P GL+CDLLWSD
Sbjct: 204 YEACLQSFNALPLAAIMNKQFLCVHGGLSPELHTLNDIRMINRFCEPPTHGLMCDLLWSD 263
Query: 635 PDKD 646
P +D
Sbjct: 264 PLED 267
>SPBC3F6.01c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 146 bits (355), Expect = 2e-36
Identities = 76/189 (40%), Positives = 113/189 (59%), Gaps = 8/189 (4%)
Frame = +2
Query: 137 REIFLQQPILLEL----EAPLKICGDIHGQYTDLLRLFEYGGFPPEAN-YLFLGDYVDRG 301
+E+ + P L+++ + L ICGD HGQY DLL +F+ G P N YLF GD+VDRG
Sbjct: 192 KELLEKTPSLIDIPVKGDETLVICGDTHGQYFDLLNIFKLHGPPSPTNKYLFNGDFVDRG 251
Query: 302 KQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFN 481
S E L AYK+ YP+ F+ RGNHE +N++YGF EC+ +YN + + F++ F+
Sbjct: 252 SWSTEVAFTLYAYKLLYPDAVFINRGNHETDDMNKVYGFEGECRSKYNERTFNIFSETFS 311
Query: 482 CLPIAAIIDEKIFCCHGGL-SPDLQGMEQIRRIMR--PTDVPDTGLLCDLLWSDPDKDVQ 652
LP+ ++I + HGGL S D ++Q+R I R +GL+ ++LW+DP +
Sbjct: 312 LLPLGSLISDSYLVVHGGLFSDDNVTLDQLRNIDRFSKKQPGQSGLMMEMLWTDP-QPAP 370
Query: 653 GWGENDRGV 679
G G + RGV
Sbjct: 371 GRGPSKRGV 379
>SPAC688.10 |rev3||DNA polymerase zeta catalytic subunit
Rev3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1480
Score = 29.5 bits (63), Expect = 0.48
Identities = 13/27 (48%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +2
Query: 470 DCFNCLPIAAIIDEKIFCC-HGGLSPD 547
D ++C+ I A+ ++FCC HGGL+PD
Sbjct: 646 DPYSCVRILAL---ELFCCSHGGLTPD 669
>SPAC20H4.08 |||phosphatase activator |Schizosaccharomyces pombe|chr
1|||Manual
Length = 270
Score = 28.3 bits (60), Expect = 1.1
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -1
Query: 624 SKSQSNPVSGTSVGRIILLICSIPCKSGDKPPWQQKIFSSII 499
SK NP+S T++ + C+I S +K P QKI S ++
Sbjct: 106 SKIAFNPISNTTLVLFLTECCNIYLFSENKKPVDQKIRSDLL 147
>SPCC1235.03 |||SMR and CUE domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 399
Score = 27.9 bits (59), Expect = 1.5
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -2
Query: 314 PVTVYHDLHSHQGISNWLLAEILHIQRDVANLCTD 210
P+T+ + +H HQ +SN E++ Q + L D
Sbjct: 129 PITIRNLIHRHQPLSNITNNELMKYQEEATQLAKD 163
>SPBC359.02 |alr2||alanine racemase Alr2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 370
Score = 26.2 bits (55), Expect = 4.4
Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Frame = +2
Query: 347 KYPENFFLLRGNHECASINRI--YGFYD-ECKRRYNIKLWKTFTDCFNCLP 490
+Y + + LL+ + + I + + F D K Y +K W+ F CLP
Sbjct: 144 EYADKYRLLKNHKNVSGIVKATHFAFADIPEKSEYTLKQWRIFEKAAGCLP 194
>SPCC1183.05c |lig4||DNA ligase Lig4|Schizosaccharomyces pombe|chr
3|||Manual
Length = 923
Score = 26.2 bits (55), Expect = 4.4
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 248 GFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKY 352
GF + + L LG Y RGKQS + L ++ Y
Sbjct: 482 GFGEDLDCLILGGYFGRGKQSGKINSFLCGLRMDY 516
>SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 202
Score = 26.2 bits (55), Expect = 4.4
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Frame = +2
Query: 110 EVRGLCTKSREIFLQQPILLELEAPLKICGDIHGQYTDLLRL------FEYGGFPPEANY 271
+V+ ++ +FL P + +LE L+ G + L RL EY P +
Sbjct: 123 QVKASPIDAQYVFLAPPSIEQLEVRLRGRGT-ENESAILQRLERARAEIEYSEKPGNFDA 181
Query: 272 LFLGDYVDRGKQSLETICL 328
L + D V++ + LE ICL
Sbjct: 182 LIVNDDVEKAYKQLEAICL 200
>SPAC823.12 |||zinc finger protein Pep5/Vps11 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 906
Score = 25.8 bits (54), Expect = 5.9
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = -1
Query: 207 CISPQILSGASNSSNMGCCRNISLDFVQSPRTSASDICTVLPG 79
C + + S NSS+ C R+ L F S R IC PG
Sbjct: 218 CKTTPLQSREKNSSSFVCTRSSGLTFYDSKR---EKICFTFPG 257
>SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1496
Score = 25.4 bits (53), Expect = 7.8
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -3
Query: 508 INYSSNWQAVKAIRESLPQFYIVSAFALVIKTINAVYA 395
+NYS NW VK I E A + K+I AVY+
Sbjct: 1344 VNYSKNWWNVK-ILEHFDFILDTEAASTFPKSITAVYS 1380
>SPCC16C4.18c |taf50||histone H4-like TAF |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 452
Score = 25.4 bits (53), Expect = 7.8
Identities = 7/19 (36%), Positives = 16/19 (84%)
Frame = -3
Query: 508 INYSSNWQAVKAIRESLPQ 452
I+YS++W A++ ++ ++PQ
Sbjct: 123 ISYSAHWLAIEGVQPAIPQ 141
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,187,980
Number of Sequences: 5004
Number of extensions: 72259
Number of successful extensions: 190
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 183
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 317927284
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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