Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6k01
         (526 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    26   0.23 
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   2.9  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   6.7  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   8.8  

>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 25.8 bits (54), Expect = 0.23
 Identities = 12/15 (80%), Positives = 12/15 (80%)
 Frame = +1

Query: 394 VATCLKFLLLNLNIS 438
           V TCL FLLL LNIS
Sbjct: 66  VQTCLDFLLLALNIS 80


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 9/18 (50%), Positives = 12/18 (66%), Gaps = 2/18 (11%)
 Frame = +3

Query: 201 DNTVMFWDDRQ--PYATR 248
           DNT + WD+ Q  P+A R
Sbjct: 809 DNTTLVWDNEQQVPFAYR 826


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = -2

Query: 348 MEHNSLIMKEICKPFFQAYRNP 283
           ++HN  ++  I KP    Y  P
Sbjct: 116 LKHNLFLLDNIVKPIIAFYYKP 137


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +1

Query: 454 KYLNFIILF 480
           KY NFIILF
Sbjct: 320 KYCNFIILF 328


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,202
Number of Sequences: 336
Number of extensions: 3038
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12678017
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)