Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc6k01
(526 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical pr... 41 6e-04
Z82274-8|CAB05230.3| 467|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z81097-15|CAB03172.1| 412|Caenorhabditis elegans Hypothetical p... 36 0.013
Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical pr... 36 0.023
Z81097-20|CAB03178.1| 417|Caenorhabditis elegans Hypothetical p... 35 0.031
AL023833-1|CAA19477.1| 417|Caenorhabditis elegans Hypothetical ... 35 0.031
AF116530-1|AAD05571.1| 417|Caenorhabditis elegans synthetic mul... 35 0.031
AL110490-1|CAB54439.1| 674|Caenorhabditis elegans Hypothetical ... 34 0.072
AL032648-5|CAA21698.1| 343|Caenorhabditis elegans Hypothetical ... 34 0.072
Z80215-3|CAB02270.1| 496|Caenorhabditis elegans Hypothetical pr... 33 0.17
Z66515-12|CAC42333.1| 860|Caenorhabditis elegans Hypothetical p... 32 0.29
Z48178-11|CAC42247.1| 860|Caenorhabditis elegans Hypothetical p... 32 0.29
AL110500-12|CAB60432.1| 362|Caenorhabditis elegans Hypothetical... 32 0.29
Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical pr... 31 0.38
AF016452-10|AAB66019.1| 620|Caenorhabditis elegans Gastrulation... 31 0.38
Z81494-11|CAN99681.1| 455|Caenorhabditis elegans Hypothetical p... 31 0.50
Z81494-7|CAI79161.1| 387|Caenorhabditis elegans Hypothetical pr... 31 0.50
Z81494-6|CAC42275.1| 451|Caenorhabditis elegans Hypothetical pr... 31 0.50
Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical pr... 31 0.50
AF039038-9|AAO12408.1| 559|Caenorhabditis elegans Hypothetical ... 30 0.88
AF039038-8|AAM81097.1| 874|Caenorhabditis elegans Hypothetical ... 30 0.88
AF039038-7|AAM81098.1| 942|Caenorhabditis elegans Hypothetical ... 30 0.88
Z93390-7|CAB07677.1| 931|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z74030-18|CAA98448.1| 494|Caenorhabditis elegans Hypothetical p... 30 1.2
Z73970-6|CAA98247.1| 494|Caenorhabditis elegans Hypothetical pr... 30 1.2
AL032675-2|CAA21780.1| 931|Caenorhabditis elegans Hypothetical ... 30 1.2
Z66515-11|CAA91354.1| 858|Caenorhabditis elegans Hypothetical p... 29 1.5
Z48178-10|CAA88206.1| 858|Caenorhabditis elegans Hypothetical p... 29 1.5
Z31590-4|CAD27606.1| 495|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z31590-3|CAD27605.1| 607|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z31590-2|CAD27604.1| 538|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z31590-1|CAA83461.1| 605|Caenorhabditis elegans Hypothetical pr... 29 2.0
AF039711-10|AAB96707.2| 567|Caenorhabditis elegans Yeast prp (s... 29 2.7
Z79756-5|CAB02115.1| 388|Caenorhabditis elegans Hypothetical pr... 28 3.6
Z71263-5|CAA95824.1| 356|Caenorhabditis elegans Hypothetical pr... 28 3.6
Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical pr... 28 3.6
AF291847-1|AAK55964.1| 356|Caenorhabditis elegans heterotrimeri... 28 3.6
AF016426-4|AAB65343.1| 335|Caenorhabditis elegans Hypothetical ... 28 3.6
AC024770-5|AAK84605.2| 684|Caenorhabditis elegans Hypothetical ... 28 3.6
Z78413-1|CAB01663.1| 727|Caenorhabditis elegans Hypothetical pr... 28 4.7
U80447-5|AAB37809.1| 439|Caenorhabditis elegans Temporarily ass... 28 4.7
U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical pr... 28 4.7
U53340-3|AAA96208.1| 578|Caenorhabditis elegans Hypothetical pr... 28 4.7
AL132904-13|CAC35846.4| 778|Caenorhabditis elegans Hypothetical... 28 4.7
Z75711-7|CAB00031.2| 380|Caenorhabditis elegans Hypothetical pr... 27 6.2
AF286377-1|AAG10298.1| 380|Caenorhabditis elegans POU family II... 27 6.2
U28730-7|AAA68258.2| 665|Caenorhabditis elegans Abnormal cell l... 27 8.2
U23449-4|AAC24299.2| 534|Caenorhabditis elegans Hypothetical pr... 27 8.2
AF275253-1|AAG28037.1| 665|Caenorhabditis elegans LIN-23 protein. 27 8.2
>Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical
protein ZC302.2a protein.
Length = 501
Score = 40.7 bits (91), Expect = 6e-04
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +3
Query: 123 MDGHTSRIFACAFNPKSHHELISGGWDNTVMFWD 224
M GHT+ +F C+FNP+S + S G+D TV WD
Sbjct: 293 MRGHTNYVFCCSFNPQS-SLIASAGFDETVRVWD 325
>Z82274-8|CAB05230.3| 467|Caenorhabditis elegans Hypothetical
protein JC8.2 protein.
Length = 467
Score = 39.9 bits (89), Expect = 0.001
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +3
Query: 108 QRKNIMDGHTSRIFACAFNPKSHHELISGGWDNTVMFWD 224
+R N GHT + + A+N + H L SGG D TV+ WD
Sbjct: 237 KRDNSAQGHTDAVISLAWNRITTHVLASGGADKTVVLWD 275
>Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical
protein C14B1.4 protein.
Length = 376
Score = 37.5 bits (83), Expect = 0.006
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +3
Query: 105 SQRKNIMDGHTSRIFACAFNPKSHHELISGGWDNTVMFWD 224
S+ + GH + +F C FNP+S ++SG +D +V WD
Sbjct: 161 SRMTKTLKGHNNYVFCCNFNPQS-SLVVSGSFDESVRIWD 199
>Z81097-15|CAB03172.1| 412|Caenorhabditis elegans Hypothetical
protein K07A1.11 protein.
Length = 412
Score = 36.3 bits (80), Expect = 0.013
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = +3
Query: 129 GHTSRIFACAFNPKSHHELISGGWDNTVMFWDDRQPYATRYLFGVH 266
GHT+ + FNP S + L +G D TV WD R Y H
Sbjct: 262 GHTAEVNCITFNPFSEYILATGSVDKTVALWDMRNMRKKMYTLKHH 307
Score = 28.7 bits (61), Expect = 2.7
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 132 HTSRIFACAFNPKSHHELISGGWDNTVMFWD 224
H IF +F+P L S G D+ V+ WD
Sbjct: 307 HNDEIFQVSFSPHYETVLASSGSDDRVIVWD 337
>Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical
protein K04G11.4 protein.
Length = 395
Score = 35.5 bits (78), Expect = 0.023
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 123 MDGHTSRIFACAFNPKSHHELISGGWDNTVMFW 221
+ GHT+ +F C FNP S + SG +D T+ W
Sbjct: 186 LKGHTNYVFCCCFNP-SGTLIASGSFDETIRIW 217
>Z81097-20|CAB03178.1| 417|Caenorhabditis elegans Hypothetical
protein K07A1.12 protein.
Length = 417
Score = 35.1 bits (77), Expect = 0.031
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +3
Query: 123 MDGHTSRIFACAFNPKSHHELISGGWDNTVMFWDDRQPYATRYLFGVH 266
+D H++ + AFNP S L +G D TV WD R + F H
Sbjct: 261 IDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRMKLHSFESH 308
Score = 29.1 bits (62), Expect = 2.0
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +3
Query: 123 MDGHTSRIFACAFNPKSHHELISGGWDNTVMFWD 224
+ GHT + ++NP ++S D TV WD
Sbjct: 168 LKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWD 201
>AL023833-1|CAA19477.1| 417|Caenorhabditis elegans Hypothetical
protein K07A1.12 protein.
Length = 417
Score = 35.1 bits (77), Expect = 0.031
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +3
Query: 123 MDGHTSRIFACAFNPKSHHELISGGWDNTVMFWDDRQPYATRYLFGVH 266
+D H++ + AFNP S L +G D TV WD R + F H
Sbjct: 261 IDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRMKLHSFESH 308
Score = 29.1 bits (62), Expect = 2.0
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +3
Query: 123 MDGHTSRIFACAFNPKSHHELISGGWDNTVMFWD 224
+ GHT + ++NP ++S D TV WD
Sbjct: 168 LKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWD 201
>AF116530-1|AAD05571.1| 417|Caenorhabditis elegans synthetic
multivulva protein LIN-53 p48 protein.
Length = 417
Score = 35.1 bits (77), Expect = 0.031
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +3
Query: 123 MDGHTSRIFACAFNPKSHHELISGGWDNTVMFWDDRQPYATRYLFGVH 266
+D H++ + AFNP S L +G D TV WD R + F H
Sbjct: 261 IDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRMKLHSFESH 308
Score = 29.1 bits (62), Expect = 2.0
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +3
Query: 123 MDGHTSRIFACAFNPKSHHELISGGWDNTVMFWD 224
+ GHT + ++NP ++S D TV WD
Sbjct: 168 LKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWD 201
>AL110490-1|CAB54439.1| 674|Caenorhabditis elegans Hypothetical
protein Y48B6A.1 protein.
Length = 674
Score = 33.9 bits (74), Expect = 0.072
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +3
Query: 99 FPSQRKNIMDGHTSRIFACAFNPKSHHELISGGWDNTVMFW 221
FP+ M GHT ++ A P+ L SGG D TV W
Sbjct: 332 FPTTLAFYMRGHTGQVRAITVEPERGELLASGGEDGTVRIW 372
>AL032648-5|CAA21698.1| 343|Caenorhabditis elegans Hypothetical
protein Y54G9A.6 protein.
Length = 343
Score = 33.9 bits (74), Expect = 0.072
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 123 MDGHTSRIFACAFNPKSHHELISGGWDNTVMFWDDR 230
+ H + FNP S ++SGGWD++V WD R
Sbjct: 105 LGSHALAVRCMEFNPMSSL-IVSGGWDSSVKLWDAR 139
>Z80215-3|CAB02270.1| 496|Caenorhabditis elegans Hypothetical
protein C36B1.5 protein.
Length = 496
Score = 32.7 bits (71), Expect = 0.17
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 123 MDGHTSRIFACAFNPKSHHELISGGWDNTVMFWDDR 230
+DGHT I + + P + E+I+G DN++ WD R
Sbjct: 376 LDGHTKEIHSVEWMPNGY-EMITGSSDNSMKVWDLR 410
>Z66515-12|CAC42333.1| 860|Caenorhabditis elegans Hypothetical
protein C05C10.6b protein.
Length = 860
Score = 31.9 bits (69), Expect = 0.29
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +3
Query: 102 PSQRKN--IMDGHTSRIFACAFNPKSHHELISGGWDNTVMFWDDRQPYATRYLFGVHMC 272
PSQ + I + H + N K+ H ++SG WD+ V+ W + ++ + F +C
Sbjct: 104 PSQAEPYAIFNEHKQNVCCLHINEKATH-MLSGSWDSNVIIWPITELNSSSFTFQTIVC 161
>Z48178-11|CAC42247.1| 860|Caenorhabditis elegans Hypothetical
protein C05C10.6b protein.
Length = 860
Score = 31.9 bits (69), Expect = 0.29
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +3
Query: 102 PSQRKN--IMDGHTSRIFACAFNPKSHHELISGGWDNTVMFWDDRQPYATRYLFGVHMC 272
PSQ + I + H + N K+ H ++SG WD+ V+ W + ++ + F +C
Sbjct: 104 PSQAEPYAIFNEHKQNVCCLHINEKATH-MLSGSWDSNVIIWPITELNSSSFTFQTIVC 161
>AL110500-12|CAB60432.1| 362|Caenorhabditis elegans Hypothetical
protein Y87G2A.11 protein.
Length = 362
Score = 31.9 bits (69), Expect = 0.29
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +3
Query: 120 IMDGHTSRIFACAFNPKSHHELISGGWDNTVMFWDDR 230
I D H R + FNP H + + G D V WD R
Sbjct: 203 IRDAHIHRTISMDFNPNLQHVIATCGDDGYVRIWDTR 239
>Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical
protein F08G12.2 protein.
Length = 331
Score = 31.5 bits (68), Expect = 0.38
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = +3
Query: 150 ACAFNPKSHHELISGGWDNTVMFWDDRQPYATRYLFGVHMCGEGLDFDKPGKTV 311
A FN S ++ISGG DN + WD R+ T L G G+ GK +
Sbjct: 170 AVTFNDSSD-QVISGGIDNVLKVWDMRRDEITYTLTGHRDTITGISLSPSGKFI 222
>AF016452-10|AAB66019.1| 620|Caenorhabditis elegans Gastrulation
defective protein 1 protein.
Length = 620
Score = 31.5 bits (68), Expect = 0.38
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 117 NIMDGHTSRIFACAFNPKSHHELISGGWDNTVMFWD 224
NI GHT+ + FNP + +E IS D ++ W+
Sbjct: 218 NITKGHTATVNCVEFNPLNKNEFISCSDDGSLRLWN 253
>Z81494-11|CAN99681.1| 455|Caenorhabditis elegans Hypothetical
protein F02E9.10c protein.
Length = 455
Score = 31.1 bits (67), Expect = 0.50
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +3
Query: 117 NIMDGHTSRIFACAFNPKSHHELISGGWDNTVMFW 221
+I + HTS I A +F+P S H L+SGG D ++ +
Sbjct: 291 SITNEHTSTISALSFSPTSRH-LLSGGDDAMILIY 324
>Z81494-7|CAI79161.1| 387|Caenorhabditis elegans Hypothetical
protein F02E9.10b protein.
Length = 387
Score = 31.1 bits (67), Expect = 0.50
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +3
Query: 117 NIMDGHTSRIFACAFNPKSHHELISGGWDNTVMFW 221
+I + HTS I A +F+P S H L+SGG D ++ +
Sbjct: 227 SITNEHTSTISALSFSPTSRH-LLSGGDDAMILIY 260
>Z81494-6|CAC42275.1| 451|Caenorhabditis elegans Hypothetical
protein F02E9.10a protein.
Length = 451
Score = 31.1 bits (67), Expect = 0.50
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +3
Query: 117 NIMDGHTSRIFACAFNPKSHHELISGGWDNTVMFW 221
+I + HTS I A +F+P S H L+SGG D ++ +
Sbjct: 291 SITNEHTSTISALSFSPTSRH-LLSGGDDAMILIY 324
>Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical
protein F38E11.5 protein.
Length = 1000
Score = 31.1 bits (67), Expect = 0.50
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +3
Query: 114 KNIMDGHTSRIFACAFNPKSHHELISGGWDNTVMFW 221
K +GHT + A NPK ++ + D TV W
Sbjct: 135 KQSFEGHTHYVMQIAINPKDNNTFATASLDKTVKVW 170
>AF039038-9|AAO12408.1| 559|Caenorhabditis elegans Hypothetical
protein K06A5.8d protein.
Length = 559
Score = 30.3 bits (65), Expect = 0.88
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 123 MDGHTSRIFACAFNPKSHHELISGGWDNTVMFWDDRQPYATRYL 254
M GHT+ I ++ ++ +S D T+ FWD RQ A +
Sbjct: 503 MKGHTAPILGLYTWSQAGNQFVSCSQDKTIRFWDLRQQTAVNVI 546
>AF039038-8|AAM81097.1| 874|Caenorhabditis elegans Hypothetical
protein K06A5.8a protein.
Length = 874
Score = 30.3 bits (65), Expect = 0.88
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 123 MDGHTSRIFACAFNPKSHHELISGGWDNTVMFWDDRQPYATRYL 254
M GHT+ I ++ ++ +S D T+ FWD RQ A +
Sbjct: 769 MKGHTAPILGLYTWSQAGNQFVSCSQDKTIRFWDLRQQTAVNVI 812
>AF039038-7|AAM81098.1| 942|Caenorhabditis elegans Hypothetical
protein K06A5.8b protein.
Length = 942
Score = 30.3 bits (65), Expect = 0.88
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 123 MDGHTSRIFACAFNPKSHHELISGGWDNTVMFWDDRQPYATRYL 254
M GHT+ I ++ ++ +S D T+ FWD RQ A +
Sbjct: 769 MKGHTAPILGLYTWSQAGNQFVSCSQDKTIRFWDLRQQTAVNVI 812
>Z93390-7|CAB07677.1| 931|Caenorhabditis elegans Hypothetical
protein VT23B5.2 protein.
Length = 931
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +3
Query: 108 QRKNIMDGHTSRIFACAFNPKSHHELISGGWDNTVMFWDDRQPYATRYL 254
++ ++++GH+ I C + +SH L+S D TV+ W + + R L
Sbjct: 576 KKLSVLNGHSDAI-TCLVSCQSHAVLVSASRDLTVLVWHLSEMFLIRQL 623
>Z74030-18|CAA98448.1| 494|Caenorhabditis elegans Hypothetical
protein D1054.15 protein.
Length = 494
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +3
Query: 108 QRKNIMDGHTSRIFACAFNPKSHHELISGGWDNTVMFWDDRQPYATRYLFG 260
Q K + GH S + A +P+ H L SGG D V WD R+ G
Sbjct: 217 QLKLSLTGHISSVRAVKVSPR-HPFLFSGGEDKQVKCWDLEYNKVIRHYHG 266
>Z73970-6|CAA98247.1| 494|Caenorhabditis elegans Hypothetical
protein D1054.15 protein.
Length = 494
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +3
Query: 108 QRKNIMDGHTSRIFACAFNPKSHHELISGGWDNTVMFWDDRQPYATRYLFG 260
Q K + GH S + A +P+ H L SGG D V WD R+ G
Sbjct: 217 QLKLSLTGHISSVRAVKVSPR-HPFLFSGGEDKQVKCWDLEYNKVIRHYHG 266
>AL032675-2|CAA21780.1| 931|Caenorhabditis elegans Hypothetical
protein VT23B5.2 protein.
Length = 931
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +3
Query: 108 QRKNIMDGHTSRIFACAFNPKSHHELISGGWDNTVMFWDDRQPYATRYL 254
++ ++++GH+ I C + +SH L+S D TV+ W + + R L
Sbjct: 576 KKLSVLNGHSDAI-TCLVSCQSHAVLVSASRDLTVLVWHLSEMFLIRQL 623
>Z66515-11|CAA91354.1| 858|Caenorhabditis elegans Hypothetical
protein C05C10.6a protein.
Length = 858
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +3
Query: 102 PSQRKN--IMDGHTSRIFACAFNPKSHHELISGGWDNTVMFW 221
PSQ + I + H + N K+ H ++SG WD+ V+ W
Sbjct: 104 PSQAEPYAIFNEHKQNVCCLHINEKATH-MLSGSWDSNVIIW 144
>Z48178-10|CAA88206.1| 858|Caenorhabditis elegans Hypothetical
protein C05C10.6a protein.
Length = 858
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +3
Query: 102 PSQRKN--IMDGHTSRIFACAFNPKSHHELISGGWDNTVMFW 221
PSQ + I + H + N K+ H ++SG WD+ V+ W
Sbjct: 104 PSQAEPYAIFNEHKQNVCCLHINEKATH-MLSGSWDSNVIIW 144
>Z31590-4|CAD27606.1| 495|Caenorhabditis elegans Hypothetical
protein R01H10.3d protein.
Length = 495
Score = 29.1 bits (62), Expect = 2.0
Identities = 9/34 (26%), Positives = 21/34 (61%)
Frame = +3
Query: 123 MDGHTSRIFACAFNPKSHHELISGGWDNTVMFWD 224
+ GH R+ A++P +++ L++ G +N + W+
Sbjct: 125 LTGHQKRVNTIAWHPVANNVLLTAGGENVMFMWN 158
>Z31590-3|CAD27605.1| 607|Caenorhabditis elegans Hypothetical
protein R01H10.3c protein.
Length = 607
Score = 29.1 bits (62), Expect = 2.0
Identities = 9/34 (26%), Positives = 21/34 (61%)
Frame = +3
Query: 123 MDGHTSRIFACAFNPKSHHELISGGWDNTVMFWD 224
+ GH R+ A++P +++ L++ G +N + W+
Sbjct: 125 LTGHQKRVNTIAWHPVANNVLLTAGGENVMFMWN 158
>Z31590-2|CAD27604.1| 538|Caenorhabditis elegans Hypothetical
protein R01H10.3b protein.
Length = 538
Score = 29.1 bits (62), Expect = 2.0
Identities = 9/34 (26%), Positives = 21/34 (61%)
Frame = +3
Query: 123 MDGHTSRIFACAFNPKSHHELISGGWDNTVMFWD 224
+ GH R+ A++P +++ L++ G +N + W+
Sbjct: 125 LTGHQKRVNTIAWHPVANNVLLTAGGENVMFMWN 158
>Z31590-1|CAA83461.1| 605|Caenorhabditis elegans Hypothetical
protein R01H10.3a protein.
Length = 605
Score = 29.1 bits (62), Expect = 2.0
Identities = 9/34 (26%), Positives = 21/34 (61%)
Frame = +3
Query: 123 MDGHTSRIFACAFNPKSHHELISGGWDNTVMFWD 224
+ GH R+ A++P +++ L++ G +N + W+
Sbjct: 125 LTGHQKRVNTIAWHPVANNVLLTAGGENVMFMWN 158
>AF039711-10|AAB96707.2| 567|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 17 protein.
Length = 567
Score = 28.7 bits (61), Expect = 2.7
Identities = 9/31 (29%), Positives = 15/31 (48%)
Frame = +3
Query: 132 HTSRIFACAFNPKSHHELISGGWDNTVMFWD 224
H S A ++P +I+ GWD + W+
Sbjct: 537 HDSTCIAALWHPHEKSRMITAGWDGLIKMWN 567
>Z79756-5|CAB02115.1| 388|Caenorhabditis elegans Hypothetical
protein F53C11.8 protein.
Length = 388
Score = 28.3 bits (60), Expect = 3.6
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 132 HTSRIFACAFNPKSHHELISGGWDNTVMFWDDRQ 233
HT + A+ P S H + + G D+ + WD +Q
Sbjct: 311 HTGPVNGIAWAPHSPHHICTAGDDSQALIWDLQQ 344
>Z71263-5|CAA95824.1| 356|Caenorhabditis elegans Hypothetical
protein F52A8.2 protein.
Length = 356
Score = 28.3 bits (60), Expect = 3.6
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 108 QRKNIMDGHTSRIFACAFNPKSHHELISGGWDNTVMFWD 224
Q+K + HTS + C F +S + +++G D+T WD
Sbjct: 147 QKKRQVATHTSYMSCCTFL-RSDNLILTGSGDSTCAIWD 184
>Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical
protein K04D7.1 protein.
Length = 325
Score = 28.3 bits (60), Expect = 3.6
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 186 ISGGWDNTVMFWDDRQPYATR 248
+SG WD T+ WD Q +TR
Sbjct: 85 LSGSWDKTLRLWDLNQGVSTR 105
>AF291847-1|AAK55964.1| 356|Caenorhabditis elegans heterotrimeric G
protein beta subunit2 protein.
Length = 356
Score = 28.3 bits (60), Expect = 3.6
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 108 QRKNIMDGHTSRIFACAFNPKSHHELISGGWDNTVMFWD 224
Q+K + HTS + C F +S + +++G D+T WD
Sbjct: 147 QKKRQVATHTSYMSCCTFL-RSDNLILTGSGDSTCAIWD 184
>AF016426-4|AAB65343.1| 335|Caenorhabditis elegans Hypothetical
protein W07B8.1 protein.
Length = 335
Score = 28.3 bits (60), Expect = 3.6
Identities = 20/66 (30%), Positives = 31/66 (46%)
Frame = +3
Query: 108 QRKNIMDGHTSRIFACAFNPKSHHELISGGWDNTVMFWDDRQPYATRYLFGVHMCGEGLD 287
Q +I + TS FA A + + SGG+ NT++ ++ T G+ CGEG +
Sbjct: 94 QINDISECKTSWAFAAAESMSDRLCINSGGFKNTILSAEELLSCCT----GMFSCGEGCE 149
Query: 288 FDKPGK 305
P K
Sbjct: 150 GGNPFK 155
>AC024770-5|AAK84605.2| 684|Caenorhabditis elegans Hypothetical
protein Y39H10A.6 protein.
Length = 684
Score = 28.3 bits (60), Expect = 3.6
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +3
Query: 129 GHTSRIFACAFNPKSHHELISGGWDNTVMFWD-DRQPYA 242
GH + A A+NP L+S G D T+ W DR A
Sbjct: 563 GHRGHVNAVAWNPADPTMLVSCGADATIRVWSLDRSETA 601
>Z78413-1|CAB01663.1| 727|Caenorhabditis elegans Hypothetical
protein T01C3.1 protein.
Length = 727
Score = 27.9 bits (59), Expect = 4.7
Identities = 11/41 (26%), Positives = 19/41 (46%)
Frame = +3
Query: 108 QRKNIMDGHTSRIFACAFNPKSHHELISGGWDNTVMFWDDR 230
++ + GH + + F P + ++GG D V WD R
Sbjct: 130 RKSQVFFGHEGSVRSICFAPDDPNVFVTGGRDFQVKIWDMR 170
>U80447-5|AAB37809.1| 439|Caenorhabditis elegans Temporarily
assigned gene nameprotein 345 protein.
Length = 439
Score = 27.9 bits (59), Expect = 4.7
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +3
Query: 129 GHTSRIFACAFNPKSHHELISGGWDNTVMFWD 224
GH ++ A + P + S WD+T++ WD
Sbjct: 277 GHRDKVSAVEWCPWNSGHAFSCSWDHTIVEWD 308
>U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical
protein F55F8.3 protein.
Length = 910
Score = 27.9 bits (59), Expect = 4.7
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 117 NIMDGHTSRIFACAFNPKSHHELISGGWDNTVMFW 221
+I+ GH S I + + +H ++SG WD T+ W
Sbjct: 482 DILSGHESAISSIDIH--GNH-IVSGSWDRTIKMW 513
>U53340-3|AAA96208.1| 578|Caenorhabditis elegans Hypothetical
protein F02E8.5 protein.
Length = 578
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = +3
Query: 105 SQRKNIMDGHTSRIFACAFNPKSHHELISGGWDNTVMFWDDRQPYATRYLF 257
S+ + + GH+ ++ F H +SG D + WD + +R LF
Sbjct: 368 SRLLSTLSGHSDQVTCVKFYQS--HSAVSGSADRVIKIWDIQNQRCSRSLF 416
>AL132904-13|CAC35846.4| 778|Caenorhabditis elegans Hypothetical
protein Y111B2A.17 protein.
Length = 778
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +3
Query: 129 GHTSRIFACAFNPKSHHELI-SGGWDNTVMFW 221
GHT I + AFN H L+ S G D V W
Sbjct: 205 GHTDWIHSIAFNDNPDHLLVASAGQDTYVRLW 236
>Z75711-7|CAB00031.2| 380|Caenorhabditis elegans Hypothetical
protein K02B12.1 protein.
Length = 380
Score = 27.5 bits (58), Expect = 6.2
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = -1
Query: 304 FPGLSKSKPSPHM*TPKR*RVAYGCLSSQNITVLSQPPDINS 179
+P L++S P PH TP VA ++SQ+ ++++Q + S
Sbjct: 93 YPHLAQSLPPPHHLTPSTAAVAAATIASQS-SIINQTSVVTS 133
>AF286377-1|AAG10298.1| 380|Caenorhabditis elegans POU family III
homeodomain proteinCEH-6 protein.
Length = 380
Score = 27.5 bits (58), Expect = 6.2
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = -1
Query: 304 FPGLSKSKPSPHM*TPKR*RVAYGCLSSQNITVLSQPPDINS 179
+P L++S P PH TP VA ++SQ+ ++++Q + S
Sbjct: 93 YPHLAQSLPPPHHLTPSTAAVAAATIASQS-SIINQTSVVTS 133
>U28730-7|AAA68258.2| 665|Caenorhabditis elegans Abnormal cell
lineage protein 23 protein.
Length = 665
Score = 27.1 bits (57), Expect = 8.2
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +3
Query: 132 HTSRIFACAFNPKSHHELISGGWDNTVMFWD 224
HT R+F F+ +++S D+T++ WD
Sbjct: 473 HTGRVFRLQFDD---FQIVSSSHDDTILIWD 500
>U23449-4|AAC24299.2| 534|Caenorhabditis elegans Hypothetical
protein K06A1.5 protein.
Length = 534
Score = 27.1 bits (57), Expect = 8.2
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +3
Query: 51 MCILTFEVHSCM*YFHFPSQRK-NIMDGHTSRIFACAFNPKSHHELISGGWDNTVMFWD 224
+C+ + +C ++ SQR + GHT ++ + H +ISG D T+ WD
Sbjct: 304 VCLASSNDKTCR-LWNIDSQRLLSTFSGHTDKVSSARLFQS--HNVISGSADRTIKNWD 359
>AF275253-1|AAG28037.1| 665|Caenorhabditis elegans LIN-23 protein.
Length = 665
Score = 27.1 bits (57), Expect = 8.2
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +3
Query: 132 HTSRIFACAFNPKSHHELISGGWDNTVMFWD 224
HT R+F F+ +++S D+T++ WD
Sbjct: 473 HTGRVFRLQFDD---FQIVSSSHDDTILIWD 500
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,140,674
Number of Sequences: 27780
Number of extensions: 273083
Number of successful extensions: 771
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 769
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1028310386
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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