Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6j19
         (465 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74031-8|CAA98451.1|  372|Caenorhabditis elegans Hypothetical pr...    30   0.94 
Z82274-5|CAB05227.1|  333|Caenorhabditis elegans Hypothetical pr...    27   6.6  
Z81568-12|CAH10810.1|  493|Caenorhabditis elegans Hypothetical p...    27   8.8  
Z81568-8|CAD89739.1|  496|Caenorhabditis elegans Hypothetical pr...    27   8.8  
Z81568-6|CAB04598.1|  511|Caenorhabditis elegans Hypothetical pr...    27   8.8  
Z81568-5|CAB04597.1|  522|Caenorhabditis elegans Hypothetical pr...    27   8.8  
Z81568-4|CAB04596.1|  509|Caenorhabditis elegans Hypothetical pr...    27   8.8  
AF099919-10|AAC68792.1|  205|Caenorhabditis elegans Max-like pro...    27   8.8  

>Z74031-8|CAA98451.1|  372|Caenorhabditis elegans Hypothetical
           protein F32D8.8 protein.
          Length = 372

 Score = 29.9 bits (64), Expect = 0.94
 Identities = 17/70 (24%), Positives = 35/70 (50%)
 Frame = -2

Query: 248 SFSSSVWCTVGSVCSTYRIWSSSARPQFRETSRRVKFVVWPILNRFLSAYSSVVAA*KWP 69
           ++S+ V+ T  + CS  + +  +    +R  SRR K   W IL+  ++  S ++ A  + 
Sbjct: 126 NYSTLVYVTSTNKCSDLKYYFQN----YRNNSRRQKPAKWDILSELMTWNSEILGALSFS 181

Query: 68  STGAELNFTV 39
             G  L++ +
Sbjct: 182 FDGVSLHYAM 191


>Z82274-5|CAB05227.1|  333|Caenorhabditis elegans Hypothetical
           protein JC8.7 protein.
          Length = 333

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = +1

Query: 241 EKLMKQELRPYRN-SGEVYCTDFEHIKRALXTC 336
           +K  K E   YR+ S   YC + EH+ R+L  C
Sbjct: 216 KKNKKNERTGYRDLSKNAYCINIEHLVRSLRLC 248


>Z81568-12|CAH10810.1|  493|Caenorhabditis elegans Hypothetical
           protein K08E3.5f protein.
          Length = 493

 Score = 26.6 bits (56), Expect = 8.8
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = +1

Query: 205 LQTEPTVHHTLLEKLMKQELRPYRNSGEV 291
           L+ +PTV  + +E L +  +RPY++ G V
Sbjct: 53  LRAKPTVDWSKIEPLPEGAIRPYKSLGHV 81


>Z81568-8|CAD89739.1|  496|Caenorhabditis elegans Hypothetical
           protein K08E3.5e protein.
          Length = 496

 Score = 26.6 bits (56), Expect = 8.8
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = +1

Query: 205 LQTEPTVHHTLLEKLMKQELRPYRNSGEV 291
           L+ +PTV  + +E L +  +RPY++ G V
Sbjct: 56  LRAKPTVDWSKIEPLPEGAIRPYKSLGHV 84


>Z81568-6|CAB04598.1|  511|Caenorhabditis elegans Hypothetical
           protein K08E3.5c protein.
          Length = 511

 Score = 26.6 bits (56), Expect = 8.8
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = +1

Query: 205 LQTEPTVHHTLLEKLMKQELRPYRNSGEV 291
           L+ +PTV  + +E L +  +RPY++ G V
Sbjct: 71  LRAKPTVDWSKIEPLPEGAIRPYKSLGHV 99


>Z81568-5|CAB04597.1|  522|Caenorhabditis elegans Hypothetical
           protein K08E3.5b protein.
          Length = 522

 Score = 26.6 bits (56), Expect = 8.8
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = +1

Query: 205 LQTEPTVHHTLLEKLMKQELRPYRNSGEV 291
           L+ +PTV  + +E L +  +RPY++ G V
Sbjct: 82  LRAKPTVDWSKIEPLPEGAIRPYKSLGHV 110


>Z81568-4|CAB04596.1|  509|Caenorhabditis elegans Hypothetical
           protein K08E3.5a protein.
          Length = 509

 Score = 26.6 bits (56), Expect = 8.8
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = +1

Query: 205 LQTEPTVHHTLLEKLMKQELRPYRNSGEV 291
           L+ +PTV  + +E L +  +RPY++ G V
Sbjct: 69  LRAKPTVDWSKIEPLPEGAIRPYKSLGHV 97


>AF099919-10|AAC68792.1|  205|Caenorhabditis elegans Max-like
           protein 2 protein.
          Length = 205

 Score = 26.6 bits (56), Expect = 8.8
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = -2

Query: 281 LLRYGLNSCFISFSSSV-WCTVGSVCSTYRIWSSSARP 171
           +L+  L+ CF SFSS V + T  ++  T   W  S  P
Sbjct: 148 MLQLLLDDCFTSFSSQVDFTTYATITRTLLSWVESLAP 185


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,322,743
Number of Sequences: 27780
Number of extensions: 145120
Number of successful extensions: 441
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 441
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 829055604
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)