Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc6j06
(661 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 27 0.10
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 27 0.18
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 27 0.18
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 27 0.18
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 27 0.18
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 27 0.18
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 27 0.18
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 27 0.18
AY321476-1|AAQ23386.1| 253|Tribolium castaneum Ash protein. 23 2.9
DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped prot... 22 3.9
EF592536-1|ABQ95982.1| 598|Tribolium castaneum beta-N-acetylglu... 21 6.8
AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory recept... 21 6.8
AM292337-1|CAL23149.2| 452|Tribolium castaneum gustatory recept... 21 6.8
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 27.5 bits (58), Expect = 0.10
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -3
Query: 539 SIPSSKATEHSRWLKTSLTASTASPSRRNSSTNIGKLGINTSSTIFTS 396
S PS+ S L + L+ ST+ P + +ST L SST TS
Sbjct: 130 STPSNSNATKSSGLTSPLSVSTSPPGKPATSTTSQNLSSPASSTSSTS 177
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 26.6 bits (56), Expect = 0.18
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -3
Query: 539 SIPSSKATEHSRWLKTSLTASTASPSRRNSSTNIGKLGINTSSTIFTS 396
S PS+ S L + L+ ST+ P + +ST L SST TS
Sbjct: 130 STPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTS 177
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 26.6 bits (56), Expect = 0.18
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -3
Query: 539 SIPSSKATEHSRWLKTSLTASTASPSRRNSSTNIGKLGINTSSTIFTS 396
S PS+ S L + L+ ST+ P + +ST L SST TS
Sbjct: 130 STPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTS 177
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 26.6 bits (56), Expect = 0.18
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -3
Query: 539 SIPSSKATEHSRWLKTSLTASTASPSRRNSSTNIGKLGINTSSTIFTS 396
S PS+ S L + L+ ST+ P + +ST L SST TS
Sbjct: 130 STPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTS 177
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 26.6 bits (56), Expect = 0.18
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -3
Query: 539 SIPSSKATEHSRWLKTSLTASTASPSRRNSSTNIGKLGINTSSTIFTS 396
S PS+ S L + L+ ST+ P + +ST L SST TS
Sbjct: 130 STPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTS 177
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 26.6 bits (56), Expect = 0.18
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -3
Query: 539 SIPSSKATEHSRWLKTSLTASTASPSRRNSSTNIGKLGINTSSTIFTS 396
S PS+ S L + L+ ST+ P + +ST L SST TS
Sbjct: 86 STPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTS 133
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 26.6 bits (56), Expect = 0.18
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -3
Query: 539 SIPSSKATEHSRWLKTSLTASTASPSRRNSSTNIGKLGINTSSTIFTS 396
S PS+ S L + L+ ST+ P + +ST L SST TS
Sbjct: 130 STPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTS 177
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 26.6 bits (56), Expect = 0.18
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -3
Query: 539 SIPSSKATEHSRWLKTSLTASTASPSRRNSSTNIGKLGINTSSTIFTS 396
S PS+ S L + L+ ST+ P + +ST L SST TS
Sbjct: 130 STPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTS 177
>AY321476-1|AAQ23386.1| 253|Tribolium castaneum Ash protein.
Length = 253
Score = 22.6 bits (46), Expect = 2.9
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +1
Query: 160 TRSCSAAFGLSFSAT-IILDTVNFSKEFNKGTPEDEEMIDLL 282
+ S ++F + S T I NF + + +PEDEE++D +
Sbjct: 206 SHSSESSFSAASSYTNTIYHQENF-ENYEPKSPEDEELLDAI 246
>DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped
protein.
Length = 126
Score = 22.2 bits (45), Expect = 3.9
Identities = 10/26 (38%), Positives = 11/26 (42%)
Frame = -1
Query: 505 AGSRLPLQRQQHHPAVGIPPLISGSW 428
A S PL H+PA PP W
Sbjct: 12 ADSTSPLLTPPHNPAYSPPPSYCDPW 37
>EF592536-1|ABQ95982.1| 598|Tribolium castaneum
beta-N-acetylglucosaminidase NAG1 protein.
Length = 598
Score = 21.4 bits (43), Expect = 6.8
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -3
Query: 392 LSNWAAVNFDTSLLAFVXSSNN 327
LSN+ A+ FD +V NN
Sbjct: 466 LSNYDALYFDCGFAGWVTDGNN 487
>AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory receptor
candidate 59 protein.
Length = 489
Score = 21.4 bits (43), Expect = 6.8
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +2
Query: 446 WRNSYGWVMLLTL 484
WR Y W++L TL
Sbjct: 161 WRCLYRWIVLYTL 173
>AM292337-1|CAL23149.2| 452|Tribolium castaneum gustatory receptor
candidate 16 protein.
Length = 452
Score = 21.4 bits (43), Expect = 6.8
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -3
Query: 464 SRRNSSTNIGKLGINTSSTIFTSFL 390
S +NS+ N K+GI + F F+
Sbjct: 26 SYKNSNVNYSKIGIVQTVAYFVIFI 50
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,542
Number of Sequences: 336
Number of extensions: 3243
Number of successful extensions: 24
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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