Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc6j06
(661 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 31 0.19
SPAC1687.22c |puf3|SPAC222.02c|RNA-binding protein Puf3 |Schizos... 31 0.19
SPCC4G3.11 |mug154||conserved fungal protein|Schizosaccharomyces... 29 0.59
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 29 0.78
SPAC513.07 |||flavonol reductase/cinnamoyl-CoA reductase family|... 29 0.78
SPBC651.06 |mug166||sequence orphan|Schizosaccharomyces pombe|ch... 28 1.0
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 2.4
SPAC1F8.06 |fta5|sma5|Sim4 and Mal2 associated |Schizosaccharomy... 27 2.4
SPAC1006.08 |etd1||ethanol-hypersensitive mutant protein |Schizo... 27 3.2
SPCC1183.07 |||U3 snoRNP-associated protein Rrp5|Schizosaccharom... 27 3.2
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 3.2
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 27 3.2
SPBC1A4.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 3.2
SPBPB7E8.02 |||PSP1 family protein|Schizosaccharomyces pombe|chr... 26 4.2
SPCC18B5.03 |wee1||dual specificity protein kinase Wee1|Schizosa... 26 5.5
SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr 1||... 25 7.3
SPAC4G8.11c |atp10||F1-F0 ATPase assembly protein|Schizosaccharo... 25 7.3
SPBC14F5.13c |||alkaline phosphatase |Schizosaccharomyces pombe|... 25 7.3
SPAC1687.05 |pli1||SUMO E3 ligase Pli1|Schizosaccharomyces pombe... 25 9.7
SPBPB2B2.12c |||UDP-glucose 4-epimerase|Schizosaccharomyces pomb... 25 9.7
SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4 |S... 25 9.7
SPBC582.06c |mcp6|hrs1, mug3|meiosis specific coiled-coil protei... 25 9.7
SPBC418.02 |||NatA N-acetyltransferase complex subunit |Schizosa... 25 9.7
SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|c... 25 9.7
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 30.7 bits (66), Expect = 0.19
Identities = 32/92 (34%), Positives = 39/92 (42%)
Frame = -3
Query: 632 PIQRENESSFSARSSLFGDITAMSLFIPLVRSIPSSKATEHSRWLKTSLTASTASPSRRN 453
P SS + SSL T S SI SS S + ++ST S S +
Sbjct: 104 PTSSSLTSSSATSSSLASSSTTSSSLAS--SSITSSSLASSSITSSSLASSSTTSSSLAS 161
Query: 452 SSTNIGKLGINTSSTIFTSFLSNWAAVNFDTS 357
SSTN TSS +S LS+ AA N TS
Sbjct: 162 SSTNSTTSATPTSSAT-SSSLSSTAASNSATS 192
>SPAC1687.22c |puf3|SPAC222.02c|RNA-binding protein Puf3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 732
Score = 30.7 bits (66), Expect = 0.19
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Frame = -3
Query: 512 HSRWLKTSLTASTASPSRRNSSTNIGKLGINTSSTIFT---SFLSNWAAVNFDTSLLA 348
H+R +T+ PSR S ++IG L T S+I + SF +W +FD+SL+A
Sbjct: 221 HTRAHSDFWIPATSKPSRHASHSSIGDLTTITQSSISSGSGSFKPSWDG-SFDSSLMA 277
>SPCC4G3.11 |mug154||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 316
Score = 29.1 bits (62), Expect = 0.59
Identities = 24/69 (34%), Positives = 31/69 (44%)
Frame = -3
Query: 539 SIPSSKATEHSRWLKTSLTASTASPSRRNSSTNIGKLGINTSSTIFTSFLSNWAAVNFDT 360
SIP S A L ST P +RN + K INTS + F +FLS +
Sbjct: 42 SIPFSLAVNFIFLLMRIYIKSTHVPVQRNQLF-VDKQSINTSRSWFRAFLSFLSICFLFI 100
Query: 359 SLLAFVXSS 333
S L F+ S+
Sbjct: 101 SFLNFIFST 109
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 28.7 bits (61), Expect = 0.78
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = -3
Query: 530 SSKATEHSRWLKTSLTASTASPSRRNSSTNIGKLGINTSSTIFTSFLS-NWAAVNFDTSL 354
SS +T+ S W T+ T S S+ SST+I N +ST FTS S + ++ + TS
Sbjct: 611 SSSSTQVS-WNSTTPITGT-STSKVTSSTSIPLTSTNRTSTTFTSSTSISTSSSSTATSS 668
Query: 353 LAFVXSSNN 327
+F S++
Sbjct: 669 TSFASESSS 677
>SPAC513.07 |||flavonol reductase/cinnamoyl-CoA reductase
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 336
Score = 28.7 bits (61), Expect = 0.78
Identities = 21/69 (30%), Positives = 35/69 (50%)
Frame = +1
Query: 205 IILDTVNFSKEFNKGTPEDEEMIDLLERVLMIENPIDERXRLLDXLTKAKSDVSKLTAAQ 384
+I+ V+ S F+ G +D E+I + +EN D + +LLD K + L AAQ
Sbjct: 57 VIVKDVSASNAFD-GVLKDVELICHIASPFFVENVTDNKSQLLDPAVKGTLGI--LEAAQ 113
Query: 385 LLRKDVKIV 411
++ +IV
Sbjct: 114 GVKSIKRIV 122
>SPBC651.06 |mug166||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 234
Score = 28.3 bits (60), Expect = 1.0
Identities = 28/101 (27%), Positives = 46/101 (45%)
Frame = -3
Query: 650 LERRRRPIQRENESSFSARSSLFGDITAMSLFIPLVRSIPSSKATEHSRWLKTSLTASTA 471
L+++ ++R E + SL + S V ++PS K R KTS T ++
Sbjct: 71 LQQKYARLERLQEQILNLERSLLNYKSLKSNSTTTVATVPSEKRYFFRRKPKTSSTTNSL 130
Query: 470 SPSRRNSSTNIGKLGINTSSTIFTSFLSNWAAVNFDTSLLA 348
S S +SS + N +ST+ T + AV +D+ L A
Sbjct: 131 SSS--SSSVSHMNQDANPNSTVLT-----FTAVPYDSCLPA 164
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 27.1 bits (57), Expect = 2.4
Identities = 26/102 (25%), Positives = 49/102 (48%)
Frame = -3
Query: 632 PIQRENESSFSARSSLFGDITAMSLFIPLVRSIPSSKATEHSRWLKTSLTASTASPSRRN 453
P+ SS S+ +S + + + P+S T S +S+ +S++SPS +
Sbjct: 169 PLTSSTFSSLSSSTSSSQPSVSSTSSSTFSSAAPTS--TSSSYLSSSSVVSSSSSPSSSS 226
Query: 452 SSTNIGKLGINTSSTIFTSFLSNWAAVNFDTSLLAFVXSSNN 327
SST + ++TSS TS S+ + + +S + SS++
Sbjct: 227 SST-LTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSS 267
>SPAC1F8.06 |fta5|sma5|Sim4 and Mal2 associated |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 385
Score = 27.1 bits (57), Expect = 2.4
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Frame = -3
Query: 608 SFSARSSLFGDITAMSLFIPLVRS----IPSSKATEHSRWLKTSLTASTASPSRRNSSTN 441
S S+ SS + ++ S+ I V S IPSS T + T ++S S SST
Sbjct: 79 SISSSSSTSSEYSSSSIPITTVSSSDSFIPSSSQTISASSSTTDNVIVSSSISSTVSSTP 138
Query: 440 IGKLGINTSSTIFTSFLSNWAAV 372
+ + TS T F S + + +
Sbjct: 139 VSTIYSGTSGTTFVSSSTTYQVI 161
>SPAC1006.08 |etd1||ethanol-hypersensitive mutant protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 391
Score = 26.6 bits (56), Expect = 3.2
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = -3
Query: 548 LVRSIPSSKATEHSRWLKTSLTASTASPSRRNSSTNIGKLGINTSSTI 405
L + + +S+ + W K S S S SR+ S +G+ + ST+
Sbjct: 66 LPKEVNTSECIDQGSWRKPSAFESLRSYSRKFSKRIFSFIGVESKSTV 113
>SPCC1183.07 |||U3 snoRNP-associated protein Rrp5|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1690
Score = 26.6 bits (56), Expect = 3.2
Identities = 20/88 (22%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Frame = +1
Query: 172 SAAFGLSFSATIILDTVNFSKE-----FNKGTPEDEEMIDLLERVLMIENPIDERXRLLD 336
SA + S T + +V S+E F + E+ ++ +E I+NP+DE +
Sbjct: 802 SAVYKPQQSVTCVCLSVELSQEKAFMSFKPLAQKQEKAVEFMESKYDIDNPVDETIKKTY 861
Query: 337 XLTKAKSDVSKLTAAQLLRKDVKIVEDV 420
K + +T+A+ + +V + +V
Sbjct: 862 DYVAGKITWAVVTSAKASQLNVDLAANV 889
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 26.6 bits (56), Expect = 3.2
Identities = 28/98 (28%), Positives = 51/98 (52%)
Frame = -3
Query: 602 SARSSLFGDITAMSLFIPLVRSIPSSKATEHSRWLKTSLTASTASPSRRNSSTNIGKLGI 423
S+ S IT +S I SIPS+ ++ + + L++ST+SPS ST++
Sbjct: 548 SSSSDFSSSITTISSGISS-SSIPSTFSS-----VSSILSSSTSSPS----STSLSISSS 597
Query: 422 NTSSTIFTSFLSNWAAVNFDTSLLAFVXSSNNRXLSSM 309
+TSST ++ S+ ++++ S + + SS SS+
Sbjct: 598 STSSTFSSASTSSPSSISSSISSSSTILSSPTPSTSSL 635
Score = 25.8 bits (54), Expect = 5.5
Identities = 19/83 (22%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = -3
Query: 593 SSLFGDITAMSLFIPLVRSIPSSKATEHSRWLKTS-LTASTASPSRRNSSTNIGKLGINT 417
SS + ++ ++ + S+ + ++ S W +S + STA+ + +S+++I ++
Sbjct: 926 SSWTAETSSSAITSSVAASVTPTSSSSASSWSSSSEVDPSTAASATGSSTSSIATASVSG 985
Query: 416 SSTIFTSFLSNWAAVNFDTSLLA 348
SS TS ++ +A + TS +A
Sbjct: 986 SS---TSSVATASATDSSTSSIA 1005
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 26.6 bits (56), Expect = 3.2
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = -3
Query: 572 TAMSLFIPLVRSIPSSKATEHSRWLKTSLTASTASPSRRNSSTNI-GKLGINTSSTIFTS 396
TA++ IP+ S + +T + + + S S S NSST I +NTS+ I +S
Sbjct: 1276 TALNTSIPITSSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNTSTPITSS 1335
Query: 395 FLSN 384
+ N
Sbjct: 1336 SVLN 1339
Score = 26.2 bits (55), Expect = 4.2
Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
Frame = -3
Query: 617 NESSFSARSSLFGDITAMSLFIPLVRSIP--SSKATEHSRWLKTSLTASTASP----SRR 456
N S+ SS+ TA++ L S P SS S + +S +T++P S
Sbjct: 691 NTSTPITSSSVLNSSTAITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTPITSSSVL 750
Query: 455 NSSTNIGKLGINTSSTIFTS 396
NSST I I SST TS
Sbjct: 751 NSSTPITSSSILNSSTPITS 770
Score = 25.4 bits (53), Expect = 7.3
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = -3
Query: 572 TAMSLFIPLVRSIPSSKATEHSRWLKTSLTASTASPSRRNSSTNIGKLGI-NTSSTIFTS 396
TA++ P+ S + +T + + + + AS S NSST I + N+S+ I +S
Sbjct: 3424 TALNTSTPITSSTVVNSSTPITSSSVLNSSTAIASSSILNSSTPITSSSVLNSSTPISSS 3483
Query: 395 FLSNWAAVNFDTSLLAFVXS 336
+ + V +S+L++ S
Sbjct: 3484 TVITSSVVIGSSSVLSYASS 3503
>SPBC1A4.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 249
Score = 26.6 bits (56), Expect = 3.2
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = -3
Query: 632 PIQRENESSFSARSSLFGDITAMSLFI-PLVRSIPSSKATEHSRWLKTSLTASTASPS 462
P Q + S+F+ F + SL PL + PS A++ S WL S ST+SPS
Sbjct: 116 PTQSSHISNFTNSQKYFANDLPNSLTDQPLAQ--PS--ASQRSTWLPCSAAVSTSSPS 169
>SPBPB7E8.02 |||PSP1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 749
Score = 26.2 bits (55), Expect = 4.2
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Frame = -3
Query: 539 SIPSSKATEHSRWLKTSLTASTASPSRRNSSTNIGKLGINTSSTIF---TSFLSNWAAVN 369
S+P + A E+ S+ A++ +P + + + ST+ TS +SN+ +
Sbjct: 356 SVPFNAAAENINDTPDSVLANSPTPRHLPYTWSRHSTSGPSRSTVLNPSTSRMSNYTGLE 415
Query: 368 FDTSLLAFVXSSNNRXLSSMG 306
+ L+F SN+ L S+G
Sbjct: 416 SHLAQLSFKRRSNSATLPSLG 436
>SPCC18B5.03 |wee1||dual specificity protein kinase
Wee1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 877
Score = 25.8 bits (54), Expect = 5.5
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = -3
Query: 548 LVRSIPSSKATEHSRWLKTSLTASTASPSRRNSSTNIGKLGINTSST 408
L SIPSS+ T + + S +S SP+ R + KLG +S T
Sbjct: 251 LFSSIPSSRHTTSNHFPSNSAQSSLFSPTARPLTAR--KLGFASSQT 295
>SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1116
Score = 25.4 bits (53), Expect = 7.3
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = -3
Query: 497 KTSLT-ASTASPSRRNSSTNIGKLGINTSSTIFTSFLSNWAAVNFDTSLLAF--VXSSNN 327
KT L +ST PS+ +S + ++S +FT S + + N ++SL +F V SN
Sbjct: 95 KTLLAPSSTRVPSKNSSYETLTYSAKDSSDDVFTETNSGFRSSNQNSSLKSFQSVPDSNV 154
Query: 326 RXLSSMG 306
G
Sbjct: 155 NVFGGFG 161
>SPAC4G8.11c |atp10||F1-F0 ATPase assembly
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 267
Score = 25.4 bits (53), Expect = 7.3
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = -3
Query: 608 SFSARSSLFGDITAMSLFIP---LVRSIPSSKATEHSRWLKTSLTASTASPSRR 456
SFS +S A S IP LV+ S+ + + W K + AST+SP +R
Sbjct: 24 SFSTKSLNDTKEKAPSALIPVGLLVKPTMLSEVQKPTLWEKLTKPASTSSPEQR 77
>SPBC14F5.13c |||alkaline phosphatase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 532
Score = 25.4 bits (53), Expect = 7.3
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -1
Query: 571 PPCLSSFHLSDPFLAAKLLNTRAGSRLPLQRQQHHPAVGIP 449
P LS S +LA+ ++N + LP Q PA+GIP
Sbjct: 375 PQVLSLALHSIEYLASAIVNHNQNTLLPYIEQFVLPAIGIP 415
>SPAC1687.05 |pli1||SUMO E3 ligase Pli1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 727
Score = 25.0 bits (52), Expect = 9.7
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -1
Query: 622 EKTNRAFRLDPHCSGTSPPCLSSFHLSDPFLAAKLLN 512
E+ N F + P C GT SFH++ P L +KLLN
Sbjct: 132 EQFNAPFVV-PACVGTRNTISFSFHVTPPAL-SKLLN 166
>SPBPB2B2.12c |||UDP-glucose 4-epimerase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 25.0 bits (52), Expect = 9.7
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = -3
Query: 605 FSARSSLFGDITAMSLFIPLVRSIPSSKATEHSR 504
FS+ ++++GD T IP+ S P+ + +
Sbjct: 126 FSSSATVYGDATRFDNMIPIPESCPNDPTNPYGK 159
>SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 517
Score = 25.0 bits (52), Expect = 9.7
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -3
Query: 659 RAQLERRRRPIQRENESSFSARSSLFGDITAMSLFIPLVRSIPSSKAT 516
+ + E R +EN SS S R +FGD M+ F+ P S AT
Sbjct: 43 KCETEALLREENKENLSSDSIRQMIFGD--EMAGFVDTGEKPPCSYAT 88
>SPBC582.06c |mcp6|hrs1, mug3|meiosis specific coiled-coil protein
Mcp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 327
Score = 25.0 bits (52), Expect = 9.7
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -3
Query: 245 LLNSFEKFTVSRMIVAEKLRPKAAEQER 162
++++FE+ + R + E L K EQER
Sbjct: 64 IIDAFERDSTQRTLQIESLESKIGEQER 91
>SPBC418.02 |||NatA N-acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 25.0 bits (52), Expect = 9.7
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = -2
Query: 144 HNFTFRHKKKDYIYYEKQF*FAAFIY 67
+NF F H K D+ + +K + + ++Y
Sbjct: 215 NNFNFEHIKADFAFRQKNYEESIYLY 240
>SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 596
Score = 25.0 bits (52), Expect = 9.7
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -2
Query: 129 RHKKKDYIYYEKQF*FAAF 73
RH K++Y+ YEK + F +
Sbjct: 80 RHNKQEYVVYEKNWIFVPY 98
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,677,690
Number of Sequences: 5004
Number of extensions: 54655
Number of successful extensions: 231
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 230
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 299817502
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -