Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6i04
         (628 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    25   1.5  
AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan transpo...    25   2.6  
AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan transpo...    25   2.6  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    23   7.9  

>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 439 YNSSVLVCPSELLLNGWTDFHET 371
           YN+S ++   EL LN  TD+ ET
Sbjct: 476 YNTSTVMTNKELQLNPTTDYSET 498


>AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = +1

Query: 73  PVLTNPGLTVIMYN*RSDYVVYINQYNLYNIQFFLQSFIEIRLGIF 210
           P L   G+ ++ Y     Y     QY L  + F+  SF+ + L +F
Sbjct: 455 PALVAVGIAIVGYGIGIIYTTPGGQYVLDFLDFYGASFVALVLAVF 500


>AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = +1

Query: 73  PVLTNPGLTVIMYN*RSDYVVYINQYNLYNIQFFLQSFIEIRLGIF 210
           P L   G+ ++ Y     Y     QY L  + F+  SF+ + L +F
Sbjct: 455 PALVAVGIAIVGYGIGIIYTTPGGQYVLDFLDFYGASFVALVLAVF 500


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 12/23 (52%), Positives = 12/23 (52%)
 Frame = +1

Query: 199 LGIFIQDRLTKMQTFTYTAHIAV 267
           LGI I DRL   Q   Y A  AV
Sbjct: 717 LGIMIDDRLEYTQHIKYVAERAV 739


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 616,949
Number of Sequences: 2352
Number of extensions: 11386
Number of successful extensions: 21
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61050630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)