Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6i04
         (628 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003585-1|AAO39589.1|  687|Drosophila melanogaster LD11102p pro...    30   2.2  
AE014297-2294|AAF55379.3|  682|Drosophila melanogaster CG18213-P...    30   2.2  

>BT003585-1|AAO39589.1|  687|Drosophila melanogaster LD11102p
           protein.
          Length = 687

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 15/54 (27%), Positives = 27/54 (50%)
 Frame = -3

Query: 347 ENGLFTILIQNSL*FSNLRPVYMTSVGTAICAVYVNVCIFVNRSWIKMPKRISM 186
           +N   T    + L + +L P   T+ GT I  +   +C+FVNR +     ++S+
Sbjct: 109 KNNQNTTACNDLLYYESLDPALKTAEGTIISQILHCICLFVNREYEASKDKLSV 162


>AE014297-2294|AAF55379.3|  682|Drosophila melanogaster CG18213-PA
           protein.
          Length = 682

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 15/54 (27%), Positives = 27/54 (50%)
 Frame = -3

Query: 347 ENGLFTILIQNSL*FSNLRPVYMTSVGTAICAVYVNVCIFVNRSWIKMPKRISM 186
           +N   T    + L + +L P   T+ GT I  +   +C+FVNR +     ++S+
Sbjct: 109 KNNQNTTACNDLLYYESLDPALKTAEGTIISQILHCICLFVNREYEASKDKLSV 162


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,261,392
Number of Sequences: 53049
Number of extensions: 496142
Number of successful extensions: 1292
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1292
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2600432100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)