Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc6h22
(548 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X78627-1|CAA55341.1| 228|Homo sapiens translin protein. 144 2e-34
BT019491-1|AAV38298.1| 228|Homo sapiens translin protein. 144 2e-34
BT019490-1|AAV38297.1| 228|Homo sapiens translin protein. 144 2e-34
BC002359-1|AAH02359.1| 228|Homo sapiens translin protein. 144 2e-34
AC018737-2|AAY14831.1| 228|Homo sapiens unknown protein. 144 2e-34
AK222868-1|BAD96588.1| 228|Homo sapiens translin variant protein. 142 5e-34
Y12563-1|CAA73150.1| 193|Homo sapiens protein ( H.sapiens gene ... 141 1e-33
X95073-1|CAA64469.1| 290|Homo sapiens Translin associated prote... 58 2e-08
BC011797-1|AAH11797.1| 290|Homo sapiens translin-associated fac... 58 2e-08
BC010376-1|AAH10376.1| 290|Homo sapiens translin-associated fac... 58 2e-08
AL626763-6|CAH70959.1| 290|Homo sapiens translin-associated fac... 58 2e-08
AL445524-3|CAH72107.1| 290|Homo sapiens translin-associated fac... 58 2e-08
AF271269-1|AAK58640.1| 290|Homo sapiens translin-like protein p... 58 2e-08
BX537845-1|CAD97854.1| 1156|Homo sapiens hypothetical protein pr... 30 4.6
BC043404-1|AAH43404.1| 1143|Homo sapiens non-SMC condensin II co... 30 4.6
BC020560-1|AAH20560.1| 935|Homo sapiens NCAPG2 protein protein. 30 4.6
AK023347-1|BAB14534.1| 698|Homo sapiens protein ( Homo sapiens ... 30 4.6
AK022744-1|BAB14219.1| 774|Homo sapiens protein ( Homo sapiens ... 30 4.6
AK000318-1|BAA91081.1| 888|Homo sapiens protein ( Homo sapiens ... 30 4.6
>X78627-1|CAA55341.1| 228|Homo sapiens translin protein.
Length = 228
Score = 144 bits (348), Expect = 2e-34
Identities = 66/87 (75%), Positives = 77/87 (88%)
Frame = +1
Query: 205 KEGFHLDIEDYLIGLLTMCSELSRLAVNSVTRGDYERPLRISKFVMELNAGFRLLNLKND 384
++GFHLD+EDYL G+L + SELSRL+VNSVT GDY RPL IS F+ EL++GFRLLNLKND
Sbjct: 130 EKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSGFRLLNLKND 189
Query: 385 HLRKRFDALKYDVKKIEEVVYDLSIRG 465
LRKR+D LKYDVKK+EEVVYDLSIRG
Sbjct: 190 SLRKRYDGLKYDVKKVEEVVYDLSIRG 216
>BT019491-1|AAV38298.1| 228|Homo sapiens translin protein.
Length = 228
Score = 144 bits (348), Expect = 2e-34
Identities = 66/87 (75%), Positives = 77/87 (88%)
Frame = +1
Query: 205 KEGFHLDIEDYLIGLLTMCSELSRLAVNSVTRGDYERPLRISKFVMELNAGFRLLNLKND 384
++GFHLD+EDYL G+L + SELSRL+VNSVT GDY RPL IS F+ EL++GFRLLNLKND
Sbjct: 130 EKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSGFRLLNLKND 189
Query: 385 HLRKRFDALKYDVKKIEEVVYDLSIRG 465
LRKR+D LKYDVKK+EEVVYDLSIRG
Sbjct: 190 SLRKRYDGLKYDVKKVEEVVYDLSIRG 216
>BT019490-1|AAV38297.1| 228|Homo sapiens translin protein.
Length = 228
Score = 144 bits (348), Expect = 2e-34
Identities = 66/87 (75%), Positives = 77/87 (88%)
Frame = +1
Query: 205 KEGFHLDIEDYLIGLLTMCSELSRLAVNSVTRGDYERPLRISKFVMELNAGFRLLNLKND 384
++GFHLD+EDYL G+L + SELSRL+VNSVT GDY RPL IS F+ EL++GFRLLNLKND
Sbjct: 130 EKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSGFRLLNLKND 189
Query: 385 HLRKRFDALKYDVKKIEEVVYDLSIRG 465
LRKR+D LKYDVKK+EEVVYDLSIRG
Sbjct: 190 SLRKRYDGLKYDVKKVEEVVYDLSIRG 216
>BC002359-1|AAH02359.1| 228|Homo sapiens translin protein.
Length = 228
Score = 144 bits (348), Expect = 2e-34
Identities = 66/87 (75%), Positives = 77/87 (88%)
Frame = +1
Query: 205 KEGFHLDIEDYLIGLLTMCSELSRLAVNSVTRGDYERPLRISKFVMELNAGFRLLNLKND 384
++GFHLD+EDYL G+L + SELSRL+VNSVT GDY RPL IS F+ EL++GFRLLNLKND
Sbjct: 130 EKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSGFRLLNLKND 189
Query: 385 HLRKRFDALKYDVKKIEEVVYDLSIRG 465
LRKR+D LKYDVKK+EEVVYDLSIRG
Sbjct: 190 SLRKRYDGLKYDVKKVEEVVYDLSIRG 216
>AC018737-2|AAY14831.1| 228|Homo sapiens unknown protein.
Length = 228
Score = 144 bits (348), Expect = 2e-34
Identities = 66/87 (75%), Positives = 77/87 (88%)
Frame = +1
Query: 205 KEGFHLDIEDYLIGLLTMCSELSRLAVNSVTRGDYERPLRISKFVMELNAGFRLLNLKND 384
++GFHLD+EDYL G+L + SELSRL+VNSVT GDY RPL IS F+ EL++GFRLLNLKND
Sbjct: 130 EKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSGFRLLNLKND 189
Query: 385 HLRKRFDALKYDVKKIEEVVYDLSIRG 465
LRKR+D LKYDVKK+EEVVYDLSIRG
Sbjct: 190 SLRKRYDGLKYDVKKVEEVVYDLSIRG 216
>AK222868-1|BAD96588.1| 228|Homo sapiens translin variant protein.
Length = 228
Score = 142 bits (345), Expect = 5e-34
Identities = 65/87 (74%), Positives = 77/87 (88%)
Frame = +1
Query: 205 KEGFHLDIEDYLIGLLTMCSELSRLAVNSVTRGDYERPLRISKFVMELNAGFRLLNLKND 384
++GFHLD+EDYL G+L + SELSRL+VNSVT GDY RPL IS F+ EL++GFRLLNLKND
Sbjct: 130 EKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSGFRLLNLKND 189
Query: 385 HLRKRFDALKYDVKKIEEVVYDLSIRG 465
LRKR+D LKYDVK++EEVVYDLSIRG
Sbjct: 190 SLRKRYDGLKYDVKRVEEVVYDLSIRG 216
>Y12563-1|CAA73150.1| 193|Homo sapiens protein ( H.sapiens gene
encoding translin, exon 2 (and joined CDS). ).
Length = 193
Score = 141 bits (342), Expect = 1e-33
Identities = 65/86 (75%), Positives = 76/86 (88%)
Frame = +1
Query: 205 KEGFHLDIEDYLIGLLTMCSELSRLAVNSVTRGDYERPLRISKFVMELNAGFRLLNLKND 384
++GFHLD+EDYL G+L + SELSRL+VNSVT GDY RPL IS F+ EL++GFRLLNLKND
Sbjct: 108 EKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSGFRLLNLKND 167
Query: 385 HLRKRFDALKYDVKKIEEVVYDLSIR 462
LRKR+D LKYDVKK+EEVVYDLSIR
Sbjct: 168 SLRKRYDGLKYDVKKVEEVVYDLSIR 193
>X95073-1|CAA64469.1| 290|Homo sapiens Translin associated protein
X protein.
Length = 290
Score = 58.4 bits (135), Expect = 2e-08
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Frame = +1
Query: 232 DYLIGLLTMCSELSRLAVNSVTRGDYERPLRISKFVMELNAGFRLL-NLKNDHLRKRFDA 408
DYL+G+ + EL R+ +NSV GD + P +S+F+ ++ GF + N + K+
Sbjct: 186 DYLLGVADLTGELMRMCINSVGNGDIDTPFEVSQFLRQVYDGFSFIGNTGPYEVSKKLYT 245
Query: 409 LKYDVKKIEEVVYDLSIRGL-LPK 477
LK + K+E Y L +RG +PK
Sbjct: 246 LKQSLAKVENACYALKVRGSEIPK 269
>BC011797-1|AAH11797.1| 290|Homo sapiens translin-associated factor
X protein.
Length = 290
Score = 58.4 bits (135), Expect = 2e-08
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Frame = +1
Query: 232 DYLIGLLTMCSELSRLAVNSVTRGDYERPLRISKFVMELNAGFRLL-NLKNDHLRKRFDA 408
DYL+G+ + EL R+ +NSV GD + P +S+F+ ++ GF + N + K+
Sbjct: 186 DYLLGVADLTGELMRMCINSVGNGDIDTPFEVSQFLRQVYDGFSFIGNTGPYEVSKKLYT 245
Query: 409 LKYDVKKIEEVVYDLSIRGL-LPK 477
LK + K+E Y L +RG +PK
Sbjct: 246 LKQSLAKVENACYALKVRGSEIPK 269
>BC010376-1|AAH10376.1| 290|Homo sapiens translin-associated factor
X protein.
Length = 290
Score = 58.4 bits (135), Expect = 2e-08
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Frame = +1
Query: 232 DYLIGLLTMCSELSRLAVNSVTRGDYERPLRISKFVMELNAGFRLL-NLKNDHLRKRFDA 408
DYL+G+ + EL R+ +NSV GD + P +S+F+ ++ GF + N + K+
Sbjct: 186 DYLLGVADLTGELMRMCINSVGNGDIDTPFEVSQFLRQVYDGFSFIGNTGPYEVSKKLYT 245
Query: 409 LKYDVKKIEEVVYDLSIRGL-LPK 477
LK + K+E Y L +RG +PK
Sbjct: 246 LKQSLAKVENACYALKVRGSEIPK 269
>AL626763-6|CAH70959.1| 290|Homo sapiens translin-associated factor
X protein.
Length = 290
Score = 58.4 bits (135), Expect = 2e-08
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Frame = +1
Query: 232 DYLIGLLTMCSELSRLAVNSVTRGDYERPLRISKFVMELNAGFRLL-NLKNDHLRKRFDA 408
DYL+G+ + EL R+ +NSV GD + P +S+F+ ++ GF + N + K+
Sbjct: 186 DYLLGVADLTGELMRMCINSVGNGDIDTPFEVSQFLRQVYDGFSFIGNTGPYEVSKKLYT 245
Query: 409 LKYDVKKIEEVVYDLSIRGL-LPK 477
LK + K+E Y L +RG +PK
Sbjct: 246 LKQSLAKVENACYALKVRGSEIPK 269
>AL445524-3|CAH72107.1| 290|Homo sapiens translin-associated factor
X protein.
Length = 290
Score = 58.4 bits (135), Expect = 2e-08
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Frame = +1
Query: 232 DYLIGLLTMCSELSRLAVNSVTRGDYERPLRISKFVMELNAGFRLL-NLKNDHLRKRFDA 408
DYL+G+ + EL R+ +NSV GD + P +S+F+ ++ GF + N + K+
Sbjct: 186 DYLLGVADLTGELMRMCINSVGNGDIDTPFEVSQFLRQVYDGFSFIGNTGPYEVSKKLYT 245
Query: 409 LKYDVKKIEEVVYDLSIRGL-LPK 477
LK + K+E Y L +RG +PK
Sbjct: 246 LKQSLAKVENACYALKVRGSEIPK 269
>AF271269-1|AAK58640.1| 290|Homo sapiens translin-like protein
protein.
Length = 290
Score = 58.4 bits (135), Expect = 2e-08
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Frame = +1
Query: 232 DYLIGLLTMCSELSRLAVNSVTRGDYERPLRISKFVMELNAGFRLL-NLKNDHLRKRFDA 408
DYL+G+ + EL R+ +NSV GD + P +S+F+ ++ GF + N + K+
Sbjct: 186 DYLLGVADLTGELMRMCINSVGNGDIDTPFEVSQFLRQVYDGFSFIGNTGPYEVSKKLYT 245
Query: 409 LKYDVKKIEEVVYDLSIRGL-LPK 477
LK + K+E Y L +RG +PK
Sbjct: 246 LKQSLAKVENACYALKVRGSEIPK 269
>BX537845-1|CAD97854.1| 1156|Homo sapiens hypothetical protein
protein.
Length = 1156
Score = 30.3 bits (65), Expect = 4.6
Identities = 13/53 (24%), Positives = 25/53 (47%)
Frame = +3
Query: 195 SGVKRRFPFGH*RLSDWTIDDVLRIVSSGRELCDPRRLRAPPEDLQVRDGTER 353
+ +R + + H + I ++ ++ C R +R PPED + DG E+
Sbjct: 549 AAARRFYQYAHEHTACTNIAKLIHVIRHCLNACIQRAVREPPEDEEEEDGREK 601
>BC043404-1|AAH43404.1| 1143|Homo sapiens non-SMC condensin II
complex, subunit G2 protein.
Length = 1143
Score = 30.3 bits (65), Expect = 4.6
Identities = 13/53 (24%), Positives = 25/53 (47%)
Frame = +3
Query: 195 SGVKRRFPFGH*RLSDWTIDDVLRIVSSGRELCDPRRLRAPPEDLQVRDGTER 353
+ +R + + H + I ++ ++ C R +R PPED + DG E+
Sbjct: 549 AAARRFYQYAHEHTACTNIAKLIHVIRHCLNACIQRAVREPPEDEEEEDGREK 601
>BC020560-1|AAH20560.1| 935|Homo sapiens NCAPG2 protein protein.
Length = 935
Score = 30.3 bits (65), Expect = 4.6
Identities = 13/53 (24%), Positives = 25/53 (47%)
Frame = +3
Query: 195 SGVKRRFPFGH*RLSDWTIDDVLRIVSSGRELCDPRRLRAPPEDLQVRDGTER 353
+ +R + + H + I ++ ++ C R +R PPED + DG E+
Sbjct: 341 AAARRFYQYAHEHTACTNIAKLIHVIRHCLNACIQRAVREPPEDEEEEDGREK 393
>AK023347-1|BAB14534.1| 698|Homo sapiens protein ( Homo sapiens
cDNA FLJ13285 fis, clone OVARC1001129. ).
Length = 698
Score = 30.3 bits (65), Expect = 4.6
Identities = 13/53 (24%), Positives = 25/53 (47%)
Frame = +3
Query: 195 SGVKRRFPFGH*RLSDWTIDDVLRIVSSGRELCDPRRLRAPPEDLQVRDGTER 353
+ +R + + H + I ++ ++ C R +R PPED + DG E+
Sbjct: 104 AAARRFYQYAHEHTACTNIAKLIHVIRHCLNACIQRAVREPPEDEEEEDGREK 156
>AK022744-1|BAB14219.1| 774|Homo sapiens protein ( Homo sapiens
cDNA FLJ12682 fis, clone NT2RM4002452. ).
Length = 774
Score = 30.3 bits (65), Expect = 4.6
Identities = 13/53 (24%), Positives = 25/53 (47%)
Frame = +3
Query: 195 SGVKRRFPFGH*RLSDWTIDDVLRIVSSGRELCDPRRLRAPPEDLQVRDGTER 353
+ +R + + H + I ++ ++ C R +R PPED + DG E+
Sbjct: 180 AAARRFYQYAHEHTACTNIAKLIHVIRHCLNACIQRAVREPPEDEEEEDGREK 232
>AK000318-1|BAA91081.1| 888|Homo sapiens protein ( Homo sapiens
cDNA FLJ20311 fis, clone HEP07319. ).
Length = 888
Score = 30.3 bits (65), Expect = 4.6
Identities = 13/53 (24%), Positives = 25/53 (47%)
Frame = +3
Query: 195 SGVKRRFPFGH*RLSDWTIDDVLRIVSSGRELCDPRRLRAPPEDLQVRDGTER 353
+ +R + + H + I ++ ++ C R +R PPED + DG E+
Sbjct: 341 AAARRFYQYAHEHTACTNIAKLIHVIRHCLNACIQRAVREPPEDEEEEDGREK 393
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,542,569
Number of Sequences: 237096
Number of extensions: 1180401
Number of successful extensions: 10527
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 10435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10521
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5421005376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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