Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6h19
         (449 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0909 - 32903520-32903828,32903899-32903973,32904068-329042...    28   3.0  
01_06_0907 - 32897168-32897476,32897547-32897621,32897716-328978...    28   3.0  
05_04_0400 + 20977173-20977481,20978258-20978577,20978724-209788...    27   7.0  
01_04_0091 - 15948192-15948905                                         27   7.0  
05_04_0360 - 20617865-20619799                                         27   9.2  
01_06_1570 + 38312319-38314259                                         27   9.2  

>01_06_0909 - 32903520-32903828,32903899-32903973,32904068-32904235,
            32904508-32904565,32904638-32904879,32905145-32905216,
            32905865-32905943,32906734-32907062,32907137-32907256,
            32907355-32907429,32908260-32908342,32908942-32908984,
            32909271-32909429,32910203-32910281,32910685-32910755,
            32910847-32910946,32911023-32911229,32911348-32911442,
            32912362-32912436,32912621-32912713,32913078-32913182,
            32913851-32913921,32914943-32915096,32916035-32916098,
            32916717-32916800,32917543-32917589,32918352-32918411,
            32918521-32918592
          Length = 1062

 Score = 28.3 bits (60), Expect = 3.0
 Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
 Frame = +3

Query: 114  NTNKKT----EADSLQKLCADFNQISMLLEDNLIKVTIYVTVENGENGNMNVLGLLKYDE 281
            N+NKK+    ++    K C D    +++  +  ++  +Y T E+  +  MNVL    +DE
Sbjct: 838  NSNKKSIDLDDSHKETKYCLDPKYANVMEPERRVRTRLYFTSESHIHSLMNVLRYCNFDE 897


>01_06_0907 -
           32897168-32897476,32897547-32897621,32897716-32897883,
           32898156-32898213,32898286-32898527,32898630-32898726,
           32898827-32898921
          Length = 347

 Score = 28.3 bits (60), Expect = 3.0
 Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
 Frame = +3

Query: 114 NTNKKT----EADSLQKLCADFNQISMLLEDNLIKVTIYVTVENGENGNMNVLGLLKYDE 281
           N+NKK+    ++    K C D    +++  +  ++  +Y T E+  +  MNVL    +DE
Sbjct: 123 NSNKKSIDLDDSHKETKYCLDPKYANVMEPERRVRTRLYFTSESHIHSLMNVLRYCNFDE 182


>05_04_0400 +
           20977173-20977481,20978258-20978577,20978724-20978850,
           20979827-20979914,20980328-20980425,20980607-20980676,
           20980787-20980887,20981207-20981323,20981417-20981493,
           20981716-20982229
          Length = 606

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 11/44 (25%), Positives = 23/44 (52%)
 Frame = +1

Query: 49  PIRMTVLPLPTRANGTSPFSTSTQIKKPKRIRYKNYVQILIKSQ 180
           P +  +  +P ++N +SP  T       K ++++ +V  + KSQ
Sbjct: 499 PTQKGITLMPDKSNSSSPILTQEDKDMLKNVKFRKFVPGISKSQ 542


>01_04_0091 - 15948192-15948905
          Length = 237

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 12/46 (26%), Positives = 21/46 (45%)
 Frame = +1

Query: 55  RMTVLPLPTRANGTSPFSTSTQIKKPKRIRYKNYVQILIKSQCCWK 192
           R+ V    T A    P++ ++ I  P  ++ K Y  +    + CWK
Sbjct: 22  RLAVYDSSTGAWSARPWTNTSDIDMPLPLKVKRYSAMHAPGRICWK 67


>05_04_0360 - 20617865-20619799
          Length = 644

 Score = 26.6 bits (56), Expect = 9.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 285 HLRHTSTIPTRSCC 244
           HLRH + +P R CC
Sbjct: 369 HLRHRNLVPLRGCC 382


>01_06_1570 + 38312319-38314259
          Length = 646

 Score = 26.6 bits (56), Expect = 9.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 285 HLRHTSTIPTRSCC 244
           HLRH + +P R CC
Sbjct: 364 HLRHRNLVPLRGCC 377


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,415,224
Number of Sequences: 37544
Number of extensions: 153522
Number of successful extensions: 369
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 369
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 871620292
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)