Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6h19
         (449 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    25   1.6  
AY146757-1|AAO12072.1|  246|Anopheles gambiae odorant-binding pr...    23   6.6  
AJ618928-1|CAF02007.1|  285|Anopheles gambiae odorant-binding pr...    23   6.6  
EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton anti...    22   8.7  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    22   8.7  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    22   8.7  

>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
            protein I protein.
          Length = 1340

 Score = 24.6 bits (51), Expect = 1.6
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = +3

Query: 174  ISMLLEDNLIKVTIYVTVENGENGNMNVLGLLKYDEDENDYTF 302
            ++ LLE+++ KV   V ++NG N   N L  +    D +  T+
Sbjct: 990  LTALLENDIAKVKHAVVIQNGMNYLSNQLAFINNPYDLSIATY 1032


>AY146757-1|AAO12072.1|  246|Anopheles gambiae odorant-binding
           protein AgamOBP39 protein.
          Length = 246

 Score = 22.6 bits (46), Expect = 6.6
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +3

Query: 279 EDENDYTFL*FYSTFG*TLAAVVRANVS 362
           +D+N   ++  Y  F   ++A+VRAN +
Sbjct: 216 QDKNAQAYVKLYRCFADQISALVRANAN 243


>AJ618928-1|CAF02007.1|  285|Anopheles gambiae odorant-binding
           protein OBPjj83a protein.
          Length = 285

 Score = 22.6 bits (46), Expect = 6.6
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +3

Query: 279 EDENDYTFL*FYSTFG*TLAAVVRANVS 362
           +D+N   ++  Y  F   ++A+VRAN +
Sbjct: 255 QDKNAQAYVKLYRCFADQISALVRANAN 282


>EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton
           antiporter protein.
          Length = 647

 Score = 22.2 bits (45), Expect = 8.7
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = -3

Query: 408 KLKTYLNGKLACLKGTKRWREQQRPAFNQTS 316
           KL      +L  L GT  WR   RP+ +  S
Sbjct: 580 KLLKKTKQQLEPLDGTLGWRRSHRPSLHDIS 610


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 22.2 bits (45), Expect = 8.7
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 76  PTRANGTSPFSTSTQIKKP 132
           P+  +GT PF  S QI  P
Sbjct: 408 PSSLSGTGPFGGSCQIHGP 426


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 22.2 bits (45), Expect = 8.7
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 76  PTRANGTSPFSTSTQIKKP 132
           P+  +GT PF  S QI  P
Sbjct: 408 PSSLSGTGPFGGSCQIHGP 426


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 401,120
Number of Sequences: 2352
Number of extensions: 6221
Number of successful extensions: 19
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 38268990
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)