Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc6h09
(112 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P16709 Cluster: Ubiquitin-like protein precursor; n=19;... 55 3e-07
UniRef50_Q9WR81 Cluster: Polyprotein; n=31; root|Rep: Polyprotei... 42 0.003
UniRef50_Q9E2W4 Cluster: Polyprotein; n=1; Bovine viral diarrhea... 42 0.003
UniRef50_Q91BI7 Cluster: Ubiquitin GP37 fusion protein; n=2; Spo... 42 0.003
UniRef50_Q7RJC6 Cluster: Ubiquitin; n=1; Plasmodium yoelii yoeli... 41 0.006
UniRef50_UPI000155314F Cluster: PREDICTED: similar to ubiquitin ... 40 0.008
UniRef50_Q868B2 Cluster: Polyubiquitin; n=3; Eukaryota|Rep: Poly... 40 0.011
UniRef50_A0CI21 Cluster: Chromosome undetermined scaffold_187, w... 39 0.019
UniRef50_A0C9Z8 Cluster: Chromosome undetermined scaffold_160, w... 39 0.019
UniRef50_Q9WR79 Cluster: Polyprotein; n=3; Bovine viral diarrhea... 39 0.025
UniRef50_Q9YMT1 Cluster: Viral ubiquitin; n=1; Lymantria dispar ... 38 0.034
UniRef50_Q0WRN6 Cluster: Polyubiquitin 4 UBQ4; n=6; Eukaryota|Re... 38 0.034
UniRef50_A2YRX2 Cluster: Putative uncharacterized protein; n=2; ... 38 0.034
UniRef50_A0PDJ3 Cluster: Polyprotein; n=65; root|Rep: Polyprotei... 38 0.044
UniRef50_UPI00006CFD8F Cluster: Ubiquitin family protein; n=1; T... 38 0.059
UniRef50_UPI00005A2EE8 Cluster: PREDICTED: similar to ubiquitin ... 38 0.059
UniRef50_Q7XBP6 Cluster: Ubiquitin/ribosomal protein P1 fusion; ... 38 0.059
UniRef50_A2YRX0 Cluster: Putative uncharacterized protein; n=1; ... 35 0.41
UniRef50_Q6A1P6 Cluster: Putative uncharacterized protein; n=1; ... 33 1.3
UniRef50_A0DWV1 Cluster: Chromosome undetermined scaffold_67, wh... 33 1.3
UniRef50_A1TWA7 Cluster: Ubiquitin precursor; n=1; Acidovorax av... 32 2.2
UniRef50_Q00Y37 Cluster: Chromosome 12 contig 1, DNA sequence; n... 32 2.2
UniRef50_A2Q424 Cluster: Ubiquitin; TRAF-like; n=2; Medicago tru... 32 2.2
UniRef50_Q6WMU7 Cluster: Ubiquitin-like protein Ublp94.4; n=1; A... 32 2.2
UniRef50_Q7XBP5 Cluster: Putative uncharacterized protein; n=1; ... 32 2.9
UniRef50_Q9FWU7 Cluster: Putative polyubiquitin; n=3; Oryza sati... 31 3.9
UniRef50_Q9FWV0 Cluster: Putative ubiquitin/ribosomal protein S2... 31 5.1
UniRef50_Q9SYF2 Cluster: F15I1.4 protein; n=4; Arabidopsis thali... 31 6.7
UniRef50_Q9SYE9 Cluster: F15I1.1 protein; n=1; Arabidopsis thali... 30 8.9
>UniRef50_P16709 Cluster: Ubiquitin-like protein precursor; n=19;
root|Rep: Ubiquitin-like protein precursor - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 77
Score = 55.2 bits (127), Expect = 3e-07
Identities = 27/31 (87%), Positives = 27/31 (87%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKIA 110
MQIFI TLTGKTITAE EP ETVADL QKIA
Sbjct: 1 MQIFIKTLTGKTITAETEPAETVADLKQKIA 31
>UniRef50_Q9WR81 Cluster: Polyprotein; n=31; root|Rep: Polyprotein -
Bovine viral diarrhea virus 2 (BVDV-2)
Length = 432
Score = 41.9 bits (94), Expect = 0.003
Identities = 18/30 (60%), Positives = 23/30 (76%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQIF+ TLTGKTIT E EP +T+ ++ KI
Sbjct: 224 MQIFVKTLTGKTITLEVEPSDTIENVKAKI 253
Score = 41.9 bits (94), Expect = 0.003
Identities = 18/30 (60%), Positives = 23/30 (76%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQIF+ TLTGKTIT E EP +T+ ++ KI
Sbjct: 300 MQIFVKTLTGKTITLEVEPSDTIENVKAKI 329
>UniRef50_Q9E2W4 Cluster: Polyprotein; n=1; Bovine viral diarrhea
virus type 2|Rep: Polyprotein - Bovine viral diarrhea
virus type 2
Length = 636
Score = 41.9 bits (94), Expect = 0.003
Identities = 18/30 (60%), Positives = 23/30 (76%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQIF+ TLTGKTIT E EP +T+ ++ KI
Sbjct: 355 MQIFVKTLTGKTITLEVEPSDTIENVKAKI 384
Score = 41.9 bits (94), Expect = 0.003
Identities = 18/30 (60%), Positives = 23/30 (76%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQIF+ TLTGKTIT E EP +T+ ++ KI
Sbjct: 431 MQIFVKTLTGKTITLEVEPSDTIENVKAKI 460
>UniRef50_Q91BI7 Cluster: Ubiquitin GP37 fusion protein; n=2;
Spodoptera litura NPV|Rep: Ubiquitin GP37 fusion protein
- Spodoptera litura multicapsid nucleopolyhedrovirus
(SpltMNPV)
Length = 351
Score = 41.9 bits (94), Expect = 0.003
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKIA 110
MQIF+ TLTGKTIT + EP ++V + Q+IA
Sbjct: 20 MQIFVKTLTGKTITVDVEPSDSVETVKQRIA 50
>UniRef50_Q7RJC6 Cluster: Ubiquitin; n=1; Plasmodium yoelii
yoelii|Rep: Ubiquitin - Plasmodium yoelii yoelii
Length = 162
Score = 40.7 bits (91), Expect = 0.006
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQIF+ TLTGKTIT + EP +T+ ++ KI
Sbjct: 36 MQIFVKTLTGKTITLDVEPSDTIENVKAKI 65
>UniRef50_UPI000155314F Cluster: PREDICTED: similar to ubiquitin
A-52 residue ribosomal protein fusion product 1; n=3;
Euarchontoglires|Rep: PREDICTED: similar to ubiquitin
A-52 residue ribosomal protein fusion product 1 - Mus
musculus
Length = 203
Score = 40.3 bits (90), Expect = 0.008
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
+QIF+ TLTGKTIT E EP +T+ ++ KI
Sbjct: 78 VQIFVKTLTGKTITLEVEPSDTIKNVKAKI 107
>UniRef50_Q868B2 Cluster: Polyubiquitin; n=3; Eukaryota|Rep:
Polyubiquitin - Euglypha rotunda
Length = 177
Score = 39.9 bits (89), Expect = 0.011
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQIF+ TLTGKTIT + E +T+ ++ QKI
Sbjct: 72 MQIFVKTLTGKTITLDVEASDTIENVKQKI 101
Score = 36.3 bits (80), Expect = 0.14
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQ 101
MQIF+ TLTGKTIT + E +T+ ++ Q
Sbjct: 150 MQIFVKTLTGKTITLDVEASDTIENVKQ 177
>UniRef50_A0CI21 Cluster: Chromosome undetermined scaffold_187,
whole genome shotgun sequence; n=2; Eukaryota|Rep:
Chromosome undetermined scaffold_187, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 271
Score = 39.1 bits (87), Expect = 0.019
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQIF+ TLTGKTIT + EP +T+ + KI
Sbjct: 1 MQIFVKTLTGKTITLDVEPSDTIDAVKAKI 30
Score = 31.1 bits (67), Expect = 5.1
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQIFI TLTG+ I + E ++V L ++I
Sbjct: 77 MQIFIKTLTGRLINLDVESTDSVESLKKQI 106
>UniRef50_A0C9Z8 Cluster: Chromosome undetermined scaffold_160,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_160,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 226
Score = 39.1 bits (87), Expect = 0.019
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQIF+ TLTGKTIT + EP +T+ + KI
Sbjct: 180 MQIFVKTLTGKTITLDVEPSDTIDAVKAKI 209
>UniRef50_Q9WR79 Cluster: Polyprotein; n=3; Bovine viral diarrhea
virus 2|Rep: Polyprotein - Bovine viral diarrhea virus 2
(BVDV-2)
Length = 261
Score = 38.7 bits (86), Expect = 0.025
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = +3
Query: 3 SNSVXMQIFIXTLTGKTITAEAEPXETVADLXQKI 107
SN I++ TLTGKTIT E EP +T+ ++ KI
Sbjct: 124 SNGNLYHIYVKTLTGKTITLEVEPSDTIENVKAKI 158
>UniRef50_Q9YMT1 Cluster: Viral ubiquitin; n=1; Lymantria dispar
MNPV|Rep: Viral ubiquitin - Lymantria dispar multicapsid
nuclear polyhedrosis virus (LdMNPV)
Length = 150
Score = 38.3 bits (85), Expect = 0.034
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQIF+ TLTGKTIT + E ++V L +KI
Sbjct: 1 MQIFVKTLTGKTITVDVEATDSVQTLKEKI 30
>UniRef50_Q0WRN6 Cluster: Polyubiquitin 4 UBQ4; n=6; Eukaryota|Rep:
Polyubiquitin 4 UBQ4 - Arabidopsis thaliana (Mouse-ear
cress)
Length = 351
Score = 38.3 bits (85), Expect = 0.034
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQIF+ TLTGKTIT E E +T+ ++ KI
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKI 30
Score = 38.3 bits (85), Expect = 0.034
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQIF+ TLTGKTIT E E +T+ ++ KI
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKI 106
Score = 38.3 bits (85), Expect = 0.034
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQIF+ TLTGKTIT E E +T+ ++ KI
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKI 182
Score = 38.3 bits (85), Expect = 0.034
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQIF+ TLTGKTIT E E +T+ ++ KI
Sbjct: 198 MQIFVKTLTGKTITLEVESSDTIDNVKAKI 227
Score = 38.3 bits (85), Expect = 0.034
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQIF+ TLTGKTIT E E +T+ ++ KI
Sbjct: 274 MQIFVKTLTGKTITLEVESSDTIDNVKAKI 303
>UniRef50_A2YRX2 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 324
Score = 38.3 bits (85), Expect = 0.034
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +3
Query: 9 SVXMQIFIXTLTGKTITAEAEPXETVADLXQKI 107
+V MQIF+ TLTGK+IT E E +T+ ++ KI
Sbjct: 232 AVKMQIFVKTLTGKSITLEVESSDTIDNVKAKI 264
Score = 35.9 bits (79), Expect = 0.18
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQI + TLTG TIT E P +T+ D+ KI
Sbjct: 1 MQIIVKTLTGITITLEVRPSDTIDDVKAKI 30
>UniRef50_A0PDJ3 Cluster: Polyprotein; n=65; root|Rep: Polyprotein -
Bovine viral diarrhea virus (BVDV) (Mucosal disease
virus)
Length = 630
Score = 37.9 bits (84), Expect = 0.044
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +3
Query: 27 FIXTLTGKTITAEAEPXETVADLXQKI 107
F+ TLTGKTIT EAEP +T+ ++ KI
Sbjct: 325 FVKTLTGKTITLEAEPSDTIENVKAKI 351
>UniRef50_UPI00006CFD8F Cluster: Ubiquitin family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ubiquitin family
protein - Tetrahymena thermophila SB210
Length = 1252
Score = 37.5 bits (83), Expect = 0.059
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQIF+ TLTGKTIT + E +T+ ++ KI
Sbjct: 1100 MQIFVKTLTGKTITLDVEASDTIENVKAKI 1129
Score = 37.5 bits (83), Expect = 0.059
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQIF+ TLTGKTIT + E +T+ ++ KI
Sbjct: 1176 MQIFVKTLTGKTITLDVEASDTIENVKAKI 1205
>UniRef50_UPI00005A2EE8 Cluster: PREDICTED: similar to ubiquitin C;
n=1; Canis lupus familiaris|Rep: PREDICTED: similar to
ubiquitin C - Canis familiaris
Length = 166
Score = 37.5 bits (83), Expect = 0.059
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
+QIF+ TLTGKT+T E EP +T + KI
Sbjct: 20 LQIFVKTLTGKTMTLEVEPRDTTENAKAKI 49
>UniRef50_Q7XBP6 Cluster: Ubiquitin/ribosomal protein P1 fusion;
n=3; Chlorarachniophyceae|Rep: Ubiquitin/ribosomal
protein P1 fusion - Bigelowiella natans (Pedinomonas
minutissima) (Chlorarachnion sp.(strain CCMP 621))
Length = 221
Score = 37.5 bits (83), Expect = 0.059
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQIF+ TLTGKTIT + + +T+ + QKI
Sbjct: 3 MQIFVKTLTGKTITLDVDSSDTINTVKQKI 32
>UniRef50_A2YRX0 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 253
Score = 34.7 bits (76), Expect = 0.41
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +3
Query: 6 NSVXMQIFIXTLTGKTITAEAEPXETVADLXQKI 107
+ + MQIF+ T TGK+IT E E +T+ ++ KI
Sbjct: 195 SDMKMQIFVKTRTGKSITLEVESSDTIDNVKAKI 228
>UniRef50_Q6A1P6 Cluster: Putative uncharacterized protein; n=1;
Euplotes vannus|Rep: Putative uncharacterized protein -
Euplotes vannus
Length = 177
Score = 33.1 bits (72), Expect = 1.3
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKIA 110
MQIF+ TLTG T+T + +T+A + KI+
Sbjct: 1 MQIFVKTLTGATLTMFVDECDTIATMKAKIS 31
>UniRef50_A0DWV1 Cluster: Chromosome undetermined scaffold_67, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_67,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 331
Score = 33.1 bits (72), Expect = 1.3
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
M+I I TL+G+T E +P ETV ++ +KI
Sbjct: 1 MKIIIKTLSGQTFDIEVQPTETVLNIKEKI 30
>UniRef50_A1TWA7 Cluster: Ubiquitin precursor; n=1; Acidovorax
avenae subsp. citrulli AAC00-1|Rep: Ubiquitin precursor
- Acidovorax avenae subsp. citrulli (strain AAC00-1)
Length = 287
Score = 32.3 bits (70), Expect = 2.2
Identities = 11/30 (36%), Positives = 22/30 (73%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQ+F+ L+G+T+T + EP +++ ++ KI
Sbjct: 40 MQVFVKMLSGETLTLDVEPSDSIENVKAKI 69
>UniRef50_Q00Y37 Cluster: Chromosome 12 contig 1, DNA sequence;
n=1; Ostreococcus tauri|Rep: Chromosome 12 contig 1,
DNA sequence - Ostreococcus tauri
Length = 57
Score = 32.3 bits (70), Expect = 2.2
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAE 71
MQIF+ TLTGKTIT E E
Sbjct: 35 MQIFVKTLTGKTITLEVE 52
>UniRef50_A2Q424 Cluster: Ubiquitin; TRAF-like; n=2; Medicago
truncatula|Rep: Ubiquitin; TRAF-like - Medicago
truncatula (Barrel medic)
Length = 343
Score = 32.3 bits (70), Expect = 2.2
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
M+IF+ LTG+TIT E +T+ + +KI
Sbjct: 268 MRIFVNLLTGETITLEVNSLDTICSVKEKI 297
>UniRef50_Q6WMU7 Cluster: Ubiquitin-like protein Ublp94.4; n=1;
Acanthamoeba castellanii|Rep: Ubiquitin-like protein
Ublp94.4 - Acanthamoeba castellanii (Amoeba)
Length = 853
Score = 32.3 bits (70), Expect = 2.2
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQIFI TLTGK+IT E +++ + K+
Sbjct: 341 MQIFIKTLTGKSITLEVSSSDSIEAVKHKL 370
>UniRef50_Q7XBP5 Cluster: Putative uncharacterized protein; n=1;
Bigelowiella natans|Rep: Putative uncharacterized
protein - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 200
Score = 31.9 bits (69), Expect = 2.9
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
+++F+ TL GKT E +P +T+ QKI
Sbjct: 7 LRVFVKTLEGKTSPIEVDPKDTIQSFKQKI 36
>UniRef50_Q9FWU7 Cluster: Putative polyubiquitin; n=3; Oryza
sativa|Rep: Putative polyubiquitin - Oryza sativa subsp.
japonica (Rice)
Length = 307
Score = 31.5 bits (68), Expect = 3.9
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQI + +TG T+T E EP +TV + KI
Sbjct: 1 MQIPVDLITGATLTLEVEPSDTVESVKAKI 30
>UniRef50_Q9FWV0 Cluster: Putative ubiquitin/ribosomal protein S27a
fusion protein; n=2; Eukaryota|Rep: Putative
ubiquitin/ribosomal protein S27a fusion protein - Oryza
sativa subsp. japonica (Rice)
Length = 147
Score = 31.1 bits (67), Expect = 5.1
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 6 NSVXMQIFIXTLTGKTITAEAEPXETVADLXQKI 107
++V QIF+ LTGKT EP +TV + K+
Sbjct: 2 STVMTQIFVKGLTGKTTALRMEPSDTVESVKVKL 35
>UniRef50_Q9SYF2 Cluster: F15I1.4 protein; n=4; Arabidopsis
thaliana|Rep: F15I1.4 protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 144
Score = 30.7 bits (66), Expect = 6.7
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQK 104
M IFI TLTG+T T E + +T+ +L K
Sbjct: 69 MMIFIKTLTGRTNTYEVKGSDTIRELKAK 97
>UniRef50_Q9SYE9 Cluster: F15I1.1 protein; n=1; Arabidopsis
thaliana|Rep: F15I1.1 protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 158
Score = 30.3 bits (65), Expect = 8.9
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
M IFI TLTG+ I E E +T+ ++ KI
Sbjct: 86 MFIFIKTLTGRRIVLEVENCDTIENIKAKI 115
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,482,934
Number of Sequences: 1657284
Number of extensions: 206214
Number of successful extensions: 377
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 377
length of database: 575,637,011
effective HSP length: 17
effective length of database: 547,463,183
effective search space used: 10401800477
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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