Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc6h09
(112 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0429 + 8378819-8378921,8379098-8379282,8380054-8380120,838... 39 7e-04
09_06_0335 + 22391378-22391480,22391580-22391769,22392747-223928... 38 9e-04
09_04_0556 + 18500324-18500426,18501501-18501697,18501826-185018... 38 9e-04
09_04_0354 + 16919133-16919235,16920145-16920355,16920478-169205... 38 9e-04
09_04_0148 + 15106392-15106484,15107517-15107776,15107920-15108028 38 9e-04
08_01_0570 - 5073138-5073410,5075386-5075530,5075561-5075754 38 9e-04
07_03_0427 - 18080959-18081079,18081203-18081410,18081608-18081710 38 9e-04
06_03_1149 + 28018932-28020529,28020989-28021067 38 9e-04
06_03_1097 - 27570037-27570262,27570575-27570730,27570763-275708... 38 9e-04
06_03_0944 + 26202053-26202229,26203788-26204047,26204145-262042... 38 9e-04
05_03_0115 - 8544590-8544958,8545408-8545503,8561954-8562505,857... 38 9e-04
05_01_0438 + 3475017-3475484 38 9e-04
04_04_1238 + 31997671-31998816 38 9e-04
03_02_0281 - 7069847-7069876,7070152-7070218,7071320-7071445,707... 38 9e-04
02_01_0464 - 3340642-3342015,3342403-3342405 38 9e-04
01_06_0031 + 25760878-25761342 38 9e-04
01_03_0108 - 12628711-12629178 38 9e-04
09_04_0554 + 18495073-18495175,18495794-18496032 37 0.003
08_01_0571 - 5088060-5088314,5088826-5088868,5088911-5089137 36 0.005
10_08_0467 - 18143358-18143540,18144520-18144597,18144624-18145364 31 0.100
10_08_0470 - 18151326-18151769 31 0.13
01_06_0033 + 25765300-25765758 29 0.53
10_08_0796 + 20643667-20643912 25 6.6
>03_02_0429 +
8378819-8378921,8379098-8379282,8380054-8380120,
8380516-8380544,8380739-8380774
Length = 139
Score = 38.7 bits (86), Expect = 7e-04
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQIF+ TLTGKTIT E E + VA++ KI
Sbjct: 1 MQIFVKTLTGKTITLEVENSDAVANVKAKI 30
>09_06_0335 +
22391378-22391480,22391580-22391769,22392747-22392813,
22393177-22393206
Length = 129
Score = 38.3 bits (85), Expect = 9e-04
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQIF+ TLTGKTIT E E +T+ ++ KI
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKI 30
>09_04_0556 +
18500324-18500426,18501501-18501697,18501826-18501892,
18502300-18502370
Length = 145
Score = 38.3 bits (85), Expect = 9e-04
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQIF+ TLTGKTIT E E +T+ ++ KI
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKI 30
>09_04_0354 +
16919133-16919235,16920145-16920355,16920478-16920544,
16920767-16920808
Length = 140
Score = 38.3 bits (85), Expect = 9e-04
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQIF+ TLTGKTIT E E +T+ ++ KI
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKI 30
>09_04_0148 + 15106392-15106484,15107517-15107776,15107920-15108028
Length = 153
Score = 38.3 bits (85), Expect = 9e-04
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQIF+ TLTGKTIT E E +T+ ++ KI
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKI 30
>08_01_0570 - 5073138-5073410,5075386-5075530,5075561-5075754
Length = 203
Score = 38.3 bits (85), Expect = 9e-04
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +3
Query: 9 SVXMQIFIXTLTGKTITAEAEPXETVADLXQKI 107
+V MQIF+ TLTGK+IT E E +T+ ++ KI
Sbjct: 111 AVKMQIFVKTLTGKSITLEVESSDTIDNVKAKI 143
>07_03_0427 - 18080959-18081079,18081203-18081410,18081608-18081710
Length = 143
Score = 38.3 bits (85), Expect = 9e-04
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQIF+ TLTGKTIT E E +T+ ++ KI
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKI 30
>06_03_1149 + 28018932-28020529,28020989-28021067
Length = 558
Score = 38.3 bits (85), Expect = 9e-04
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQIF+ TLTGKTIT E E +T+ ++ KI
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKI 30
Score = 38.3 bits (85), Expect = 9e-04
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQIF+ TLTGKTIT E E +T+ ++ KI
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKI 106
Score = 38.3 bits (85), Expect = 9e-04
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQIF+ TLTGKTIT E E +T+ ++ KI
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKI 182
Score = 38.3 bits (85), Expect = 9e-04
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQIF+ TLTGKTIT E E +T+ ++ KI
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKI 258
Score = 38.3 bits (85), Expect = 9e-04
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQIF+ TLTGKTIT E E +T+ ++ KI
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKI 334
Score = 38.3 bits (85), Expect = 9e-04
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQIF+ TLTGKTIT E E +T+ ++ KI
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKI 410
Score = 38.3 bits (85), Expect = 9e-04
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQIF+ TLTGKTIT E E +T+ ++ KI
Sbjct: 457 MQIFVKTLTGKTITLEVESSDTIDNVKAKI 486
>06_03_1097 -
27570037-27570262,27570575-27570730,27570763-27570881,
27572154-27572236,27574991-27575041,27575218-27575674,
27576139-27576228,27576672-27576701
Length = 403
Score = 38.3 bits (85), Expect = 9e-04
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQIF+ TLTGKTIT E E +T+ ++ KI
Sbjct: 41 MQIFVKTLTGKTITLEVESSDTIDNVKAKI 70
Score = 33.5 bits (73), Expect = 0.025
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQIF+ TLTGKTIT E + + ++ KI
Sbjct: 117 MQIFVKTLTGKTITLAVESSDKIDNVKAKI 146
>06_03_0944 +
26202053-26202229,26203788-26204047,26204145-26204245,
26204512-26204584,26205482-26205581
Length = 236
Score = 38.3 bits (85), Expect = 9e-04
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQIF+ TLTGKTIT E E +T+ ++ KI
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKI 30
>05_03_0115 -
8544590-8544958,8545408-8545503,8561954-8562505,
8576247-8576312,8576623-8576694,8576967-8577082,
8577743-8577838,8578498-8578765
Length = 544
Score = 38.3 bits (85), Expect = 9e-04
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQIF+ TLTGKTIT E E +T+ ++ KI
Sbjct: 468 MQIFVKTLTGKTITLEVESSDTIDNVKAKI 497
>05_01_0438 + 3475017-3475484
Length = 155
Score = 38.3 bits (85), Expect = 9e-04
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQIF+ TLTGKTIT E E +T+ ++ KI
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKI 30
>04_04_1238 + 31997671-31998816
Length = 381
Score = 38.3 bits (85), Expect = 9e-04
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQIF+ TLTGKTIT E E +T+ ++ KI
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKI 106
Score = 38.3 bits (85), Expect = 9e-04
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQIF+ TLTGKTIT E E +T+ ++ KI
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKI 182
Score = 38.3 bits (85), Expect = 9e-04
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQIF+ TLTGKTIT E E +T+ ++ KI
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKI 258
Score = 38.3 bits (85), Expect = 9e-04
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQIF+ TLTGKTIT E E +T+ ++ KI
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKI 334
Score = 37.1 bits (82), Expect = 0.002
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQIF+ TLTGKTIT E E +T+ ++ KI
Sbjct: 1 MQIFVKTLTGKTITLEVEFSDTIDNVKAKI 30
>03_02_0281 -
7069847-7069876,7070152-7070218,7071320-7071445,
7071727-7071916,7072008-7072110
Length = 171
Score = 38.3 bits (85), Expect = 9e-04
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQIF+ TLTGKTIT E E +T+ ++ KI
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKI 30
>02_01_0464 - 3340642-3342015,3342403-3342405
Length = 458
Score = 38.3 bits (85), Expect = 9e-04
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQIF+ TLTGKTIT E E +T+ ++ KI
Sbjct: 2 MQIFVKTLTGKTITLEVESSDTIDNVKAKI 31
Score = 38.3 bits (85), Expect = 9e-04
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQIF+ TLTGKTIT E E +T+ ++ KI
Sbjct: 78 MQIFVKTLTGKTITLEVESSDTIDNVKAKI 107
Score = 38.3 bits (85), Expect = 9e-04
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQIF+ TLTGKTIT E E +T+ ++ KI
Sbjct: 154 MQIFVKTLTGKTITLEVESSDTIDNVKAKI 183
Score = 38.3 bits (85), Expect = 9e-04
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQIF+ TLTGKTIT E E +T+ ++ KI
Sbjct: 230 MQIFVKTLTGKTITLEVESSDTIDNVKAKI 259
Score = 38.3 bits (85), Expect = 9e-04
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQIF+ TLTGKTIT E E +T+ ++ KI
Sbjct: 306 MQIFVKTLTGKTITLEVESSDTIDNVKAKI 335
Score = 38.3 bits (85), Expect = 9e-04
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQIF+ TLTGKTIT E E +T+ ++ KI
Sbjct: 382 MQIFVKTLTGKTITLEVESSDTIDNVKAKI 411
>01_06_0031 + 25760878-25761342
Length = 154
Score = 38.3 bits (85), Expect = 9e-04
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQIF+ TLTGKTIT E E +T+ ++ K+
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIQNVKAKV 30
>01_03_0108 - 12628711-12629178
Length = 155
Score = 38.3 bits (85), Expect = 9e-04
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQIF+ TLTGKTIT E E +T+ ++ KI
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKI 30
>09_04_0554 + 18495073-18495175,18495794-18496032
Length = 113
Score = 36.7 bits (81), Expect = 0.003
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQIF+ TLTGK+IT E E +T+ ++ KI
Sbjct: 1 MQIFVKTLTGKSITLEVESSDTIDNVKAKI 30
>08_01_0571 - 5088060-5088314,5088826-5088868,5088911-5089137
Length = 174
Score = 35.9 bits (79), Expect = 0.005
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQI + TLTG TIT E P +T+ D+ KI
Sbjct: 92 MQIIVKTLTGITITLEVRPSDTIDDVKAKI 121
>10_08_0467 - 18143358-18143540,18144520-18144597,18144624-18145364
Length = 333
Score = 31.5 bits (68), Expect = 0.100
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQI + +TG T+T E EP +TV + KI
Sbjct: 1 MQIPVDLITGATLTLEVEPSDTVESVKAKI 30
>10_08_0470 - 18151326-18151769
Length = 147
Score = 31.1 bits (67), Expect = 0.13
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 6 NSVXMQIFIXTLTGKTITAEAEPXETVADLXQKI 107
++V QIF+ LTGKT EP +TV + K+
Sbjct: 2 STVMTQIFVKGLTGKTTALRMEPSDTVESVKVKL 35
>01_06_0033 + 25765300-25765758
Length = 152
Score = 29.1 bits (62), Expect = 0.53
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 18 MQIFIXTLTGKTITAEAEPXETVADLXQKI 107
MQIF+ TL G+TIT + ++V ++ +I
Sbjct: 1 MQIFVKTLNGRTITLVVDSCDSVENVKARI 30
>10_08_0796 + 20643667-20643912
Length = 81
Score = 25.4 bits (53), Expect = 6.6
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 30 IXTLTGKTITAEAEPXETVADLXQKI 107
+ TLTGK + E ETVA + +++
Sbjct: 8 VKTLTGKEVEVSIEATETVARIKEQV 33
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,237,785
Number of Sequences: 37544
Number of extensions: 4867
Number of successful extensions: 47
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 14,793,348
effective HSP length: 17
effective length of database: 14,155,100
effective search space used: 268946900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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