Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6h07
         (593 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    27   0.60 
EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    23   9.8  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   9.8  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    23   9.8  

>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 26.6 bits (56), Expect = 0.60
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +1

Query: 352 SFLKEWFLLPHYKVVSLKSESLTWGFPHVVVFDLDST 462
           +F++E+  L H  V   ++ S  +  PH  VF  DST
Sbjct: 705 AFMQEYITLGHMSVRENENSSDGYYMPHHAVFKQDST 741


>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 397 SLKSESLTWGFPHVVVFDLDSTL 465
           +L+ E+  WG PHV      S L
Sbjct: 85  NLEEEADRWGRPHVAALSFHSLL 107


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -2

Query: 592 SSVLHDLYCHTTTRLKRNPFRAIP 521
           SS    L C+TTTR K+    A P
Sbjct: 257 SSTRKSLVCYTTTRQKKEGDAAKP 280


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -2

Query: 592 SSVLHDLYCHTTTRLKRNPFRAIP 521
           SS    L C+TTTR K+    A P
Sbjct: 258 SSTRKSLVCYTTTRQKKEGDAAKP 281


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 694,549
Number of Sequences: 2352
Number of extensions: 15752
Number of successful extensions: 239
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 239
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57188952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)