Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6h02
         (652 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003461-1|AAO39464.1| 1019|Drosophila melanogaster RH14214p pro...    29   7.2  
AY061373-1|AAL28921.1| 1205|Drosophila melanogaster LD29485p pro...    29   7.2  
AE014297-694|AAF54188.2| 1019|Drosophila melanogaster CG7918-PA ...    29   7.2  
AE014296-340|AAF47556.1| 1205|Drosophila melanogaster CG2069-PA ...    29   7.2  
AE014296-105|AAF47389.1| 2262|Drosophila melanogaster CG17046-PA...    28   9.6  

>BT003461-1|AAO39464.1| 1019|Drosophila melanogaster RH14214p
           protein.
          Length = 1019

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 11/40 (27%), Positives = 22/40 (55%)
 Frame = +3

Query: 378 IIQHENPKCPIEFTYPETDMQSACSALLKNRNGQSVPPPI 497
           +I+ +  K  +E    +TD+ SAC+ ++K  +G     P+
Sbjct: 360 VIEEKILKTKVELAGDQTDLDSACTTVIKRLSGSGQANPL 399


>AY061373-1|AAL28921.1| 1205|Drosophila melanogaster LD29485p
           protein.
          Length = 1205

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -1

Query: 463 FSNALHADCISVSGYVNSMGH-LGFSCW 383
           F+  LH  C+++SG  +S GH +   CW
Sbjct: 190 FAMKLHIQCVNISGGSSSRGHRIASICW 217


>AE014297-694|AAF54188.2| 1019|Drosophila melanogaster CG7918-PA
           protein.
          Length = 1019

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 11/40 (27%), Positives = 22/40 (55%)
 Frame = +3

Query: 378 IIQHENPKCPIEFTYPETDMQSACSALLKNRNGQSVPPPI 497
           +I+ +  K  +E    +TD+ SAC+ ++K  +G     P+
Sbjct: 360 VIEEKILKTKVELAGDQTDLDSACTTVIKRLSGSGQANPL 399


>AE014296-340|AAF47556.1| 1205|Drosophila melanogaster CG2069-PA
           protein.
          Length = 1205

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -1

Query: 463 FSNALHADCISVSGYVNSMGH-LGFSCW 383
           F+  LH  C+++SG  +S GH +   CW
Sbjct: 190 FAMKLHIQCVNISGGSSSRGHRIASICW 217


>AE014296-105|AAF47389.1| 2262|Drosophila melanogaster CG17046-PA,
           isoform A protein.
          Length = 2262

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
 Frame = +3

Query: 381 IQHENPKCPIEFTYPETDMQSACSALLKNRNGQSVPPPIKSNLRPI-ACEIPLSHFKELV 557
           + H NP      T  E D +S+    ++  + + +PP + S  R +   E+P S    + 
Sbjct: 577 VNHPNPSGTATLTDFEADSESSDFEQVQQLSRRGLPPTVGSTRRVLNLIEMPQSSNSNIS 636

Query: 558 ESNDFLLCFNLETSTMVKILSLKTHFLHLSI 650
            SN  L   N       K+L  K H  ++++
Sbjct: 637 SSNSLLQQRNHNIGN--KMLPNKAHGKNIAV 665


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,117,047
Number of Sequences: 53049
Number of extensions: 673796
Number of successful extensions: 1542
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1542
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)