Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6h01
         (711 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    25   0.46 
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    25   0.46 
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    25   0.46 
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    25   0.80 
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    24   1.4  
AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical pro...    23   1.9  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    23   2.5  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    21   9.9  

>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 25.4 bits (53), Expect = 0.46
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 432 ISAMRLHKICTGISDPYLYCQLA 364
           I A RL   C+G++  YLY +LA
Sbjct: 101 IEANRLFFYCSGLASGYLYLKLA 123


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 25.4 bits (53), Expect = 0.46
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 432 ISAMRLHKICTGISDPYLYCQLA 364
           I A RL   C+G++  YLY +LA
Sbjct: 101 IEANRLFFYCSGLASGYLYLKLA 123


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 25.4 bits (53), Expect = 0.46
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 432 ISAMRLHKICTGISDPYLYCQLA 364
           I A RL   C+G++  YLY +LA
Sbjct: 101 IEANRLFFYCSGLASGYLYLKLA 123


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 24.6 bits (51), Expect = 0.80
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +2

Query: 128 GRLYQVEYALKAINQGGLTSVALRGTDAAVVAAQ 229
           G+LY  +    ++N       +LRGT  A++AAQ
Sbjct: 10  GQLYGAQIPAMSMNVKAAEHPSLRGTPLAMLAAQ 43


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = -1

Query: 525 YTQGPASSSYAISIILQPRGLISAFWV*T*EISAMRLHKICTGISD 388
           YT+  A   YAI +IL  R L+S     + + +A  L  I   +SD
Sbjct: 178 YTKPTAIQKYAIPVILSGRDLMSCAQTGSGKTAAFMLPIIHNLLSD 223


>AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical
           protein protein.
          Length = 102

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
 Frame = -3

Query: 400 RYLGPI--LVLPVGSLVASSLYLRPAISNH 317
           RY G I  L+LP+  L      ++ AISNH
Sbjct: 49  RYQGRISSLILPIYGLSTKPKIMQGAISNH 78


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 19/70 (27%), Positives = 25/70 (35%)
 Frame = +2

Query: 428 DISQVYTQNAEMRPLGCSMMLIAYDDEAGPCVYKTDPSGYYCSYKAVAAGAKTVDGNAYL 607
           D SQV  QN  +            DDE                 + +  GAK +  N  L
Sbjct: 90  DTSQVDDQNESLEASVNENSKNGDDDEGHEWQADVSEEAVRARMQDLTEGAKNMTINDDL 149

Query: 608 EKKLKKRSDL 637
           EK+ K R D+
Sbjct: 150 EKREKDRMDI 159


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 479 SMMLIAYDDEAGPCVYKTDPSGYY 550
           + +L+ Y +E    V K DP G Y
Sbjct: 101 TFVLLNYRNEWNQLVAKYDPDGIY 124


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,251
Number of Sequences: 336
Number of extensions: 3163
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)