Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc6g19
(459 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 244 3e-67
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 243 6e-67
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 126 1e-31
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 93 1e-21
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 27 0.13
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 0.69
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 23 1.6
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 1.6
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 2.1
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 21 6.4
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 21 6.4
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 21 6.4
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 21 6.4
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 244 bits (598), Expect = 3e-67
Identities = 114/115 (99%), Positives = 114/115 (99%)
Frame = +2
Query: 62 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 241
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 242 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 406
DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI
Sbjct: 61 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 115
Score = 36.3 bits (80), Expect = 2e-04
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +3
Query: 408 VXAGTGEFEAGISKNGQ 458
V AGTGEFEAGISKNGQ
Sbjct: 116 VAAGTGEFEAGISKNGQ 132
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 243 bits (595), Expect = 6e-67
Identities = 113/115 (98%), Positives = 114/115 (99%)
Frame = +2
Query: 62 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 241
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 242 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 406
DKLKAERERGITIDIALWKFET+KYYVTIIDAPGHRDFIKNMITGTSQADCAVLI
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 115
Score = 33.9 bits (74), Expect = 8e-04
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +3
Query: 408 VXAGTGEFEAGISKNGQ 458
V AG GEFEAGISKNGQ
Sbjct: 116 VAAGIGEFEAGISKNGQ 132
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 126 bits (304), Expect = 1e-31
Identities = 58/58 (100%), Positives = 58/58 (100%)
Frame = +2
Query: 233 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 406
WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 58
Score = 36.3 bits (80), Expect = 2e-04
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +3
Query: 408 VXAGTGEFEAGISKNGQ 458
V AGTGEFEAGISKNGQ
Sbjct: 59 VAAGTGEFEAGISKNGQ 75
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 93.5 bits (222), Expect = 1e-21
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +2
Query: 281 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 406
DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 42
Score = 36.3 bits (80), Expect = 2e-04
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +3
Query: 408 VXAGTGEFEAGISKNGQ 458
V AGTGEFEAGISKNGQ
Sbjct: 43 VAAGTGEFEAGISKNGQ 59
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 26.6 bits (56), Expect = 0.13
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +2
Query: 320 VTIIDAPGHRDFIKNMITGTSQADCAVLI 406
VT +D PGH FI G D VL+
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLV 223
Score = 25.4 bits (53), Expect = 0.30
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 74 KTHINIVVIGHVDSGKST 127
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 0.69
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2
Query: 83 INIVVIGHVDSGKST 127
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 23.0 bits (47), Expect = 1.6
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1
Query: 75 FSLPIFG*SRITNCV*Y 25
FSLPIFG I +C+ Y
Sbjct: 57 FSLPIFGTRWIFSCIGY 73
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.0 bits (47), Expect = 1.6
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 305 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 406
T KYY D P + FIKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.6 bits (46), Expect = 2.1
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 305 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 406
T KYY D P + FIKN+ ++ +D L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 21.0 bits (42), Expect = 6.4
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 164 DKRTIEKFEKEAQEMG 211
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 21.0 bits (42), Expect = 6.4
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 164 DKRTIEKFEKEAQEMG 211
DK+ KFE+EA+++G
Sbjct: 112 DKKFRVKFEEEAKKLG 127
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 21.0 bits (42), Expect = 6.4
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 164 DKRTIEKFEKEAQEMG 211
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 21.0 bits (42), Expect = 6.4
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -3
Query: 424 PVPAXTNEHSAISLRGSCDHVLDEISV 344
P A +NEH A S S + L E +
Sbjct: 274 PASASSNEHEAESEHTSTPNFLSEAKI 300
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,091
Number of Sequences: 438
Number of extensions: 2134
Number of successful extensions: 18
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12189771
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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