Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc6g15
(141 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein 4|Schizosacc... 27 0.34
SPAC57A7.08 |pzh1||serine/threonine protein phosphatase Pzh1|Sch... 26 0.59
SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large subunit|... 25 1.0
SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyce... 25 1.8
SPAC4D7.10c |||SAGA complex subunit Spt20 |Schizosaccharomyces p... 25 1.8
SPBC19G7.08c |||arrestin|Schizosaccharomyces pombe|chr 2|||Manual 24 2.4
SPAC22G7.10 |||mRNA cleavage and polyadenylation specificity fac... 24 2.4
SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase |Schizosa... 24 2.4
SPBC651.09c |||RNA polymerase II associated Paf1 complex |Schizo... 24 3.2
SPCC1739.15 |wtf21|SPCC1739.15, SPCC1739.15|wtf element Wtf21|Sc... 24 3.2
SPAC23E2.01 |fep1|gaf2|iron-sensing transcription factor Fep1|Sc... 24 3.2
SPAC1687.10 |mcp1||sequence orphan|Schizosaccharomyces pombe|chr... 24 3.2
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 24 3.2
SPCC1919.12c |||aminopeptidase |Schizosaccharomyces pombe|chr 3|... 23 4.2
SPCC1442.13c |||RNA-binding protein, G-pathc type|Schizosaccharo... 23 4.2
SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C |Schizosaccharom... 23 4.2
SPAP8A3.13c |||Vid 24 family protein|Schizosaccharomyces pombe|c... 23 4.2
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 23 4.2
SPBC32H8.02c |nep2|mug120|nedd8 protease Nep2|Schizosaccharomyce... 23 4.2
SPBC16E9.11c |pub3||ubiquitin-protein ligase E3|Schizosaccharomy... 23 4.2
SPCP25A2.03 |||THO complex subunit |Schizosaccharomyces pombe|ch... 23 4.2
SPBP8B7.27 |mug30||ubiquitin-protein ligase E3|Schizosaccharomyc... 23 5.5
SPCC162.07 |ent1||epsin|Schizosaccharomyces pombe|chr 3|||Manual 23 5.5
SPAC23C11.11 |cka1|orb5|serine/threonine protein kinase Cka1|Sch... 23 7.3
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 23 7.3
SPAC637.07 |moe1||translation initiation factor eIF3d Moe1|Schiz... 23 7.3
SPBC19C2.02 |pmt1||DNA methyltransferase homolog|Schizosaccharom... 23 7.3
SPCC31H12.03c |||transcriptional regulator|Schizosaccharomyces p... 23 7.3
SPAP27G11.05c |vps41||vacuolar protein sorting-associated protei... 23 7.3
SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyce... 23 7.3
SPCC4G3.12c |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 23 7.3
SPAC7D4.03c |||conserved fungal family|Schizosaccharomyces pombe... 23 7.3
SPBC17G9.08c |csx2||Arf GAP protein|Schizosaccharomyces pombe|ch... 22 9.6
SPBC29B5.01 |atf1|mts1, sss1, gad7|transcription factor Atf1|Sch... 22 9.6
SPBC23G7.04c |nif1||SEL1 repear protein Nif1|Schizosaccharomyces... 22 9.6
SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr ... 22 9.6
SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter Trk2|Sch... 22 9.6
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 22 9.6
SPBC17A3.06 |||phosphoprotein phosphatase|Schizosaccharomyces po... 22 9.6
SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr ... 22 9.6
SPAC2E12.02 |hsf1|hstf, hsf|transcription factor Hsf1|Schizosacc... 22 9.6
SPCC11E10.07c |||translation initiation factor eIF2B alpha subun... 22 9.6
>SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein
4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 636
Score = 27.1 bits (57), Expect = 0.34
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 5/41 (12%)
Frame = +1
Query: 10 NNSPQNRHPQPNPSHNSH-NQTS----PKNSPSRHLTAPTN 117
N S Q++ P P +S NQT+ P N+PSRH+++ +N
Sbjct: 83 NVSLQSQQPLSKPVVSSKPNQTTAMPPPSNNPSRHVSSTSN 123
>SPAC57A7.08 |pzh1||serine/threonine protein phosphatase
Pzh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 515
Score = 26.2 bits (55), Expect = 0.59
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 1 PHPNNSPQNRHPQPNPSHNSHNQTSPKNSPSRHLTAPTN 117
PHP+N P P S + H+ +S +S + T+PT+
Sbjct: 102 PHPSNQPAMLSPSTAASQHHHHHSS-SSSYAVSPTSPTS 139
>SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1752
Score = 25.4 bits (53), Expect = 1.0
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 7 PNNSPQNRHPQPNPSHNSHNQTSPKNSPSRHLTAPTN 117
P+ SP + P +P+ S++ TSP SP+ +PT+
Sbjct: 1590 PSYSPTS--PSYSPTSPSYSATSPSYSPTSPSYSPTS 1624
Score = 25.4 bits (53), Expect = 1.0
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 7 PNNSPQNRHPQPNPSHNSHNQTSPKNSPSRHLTAPTN 117
P+ SP + P +P+ S++ TSP SP+ +PT+
Sbjct: 1611 PSYSPTS--PSYSPTSPSYSPTSPSYSPTSPSYSPTS 1645
Score = 25.4 bits (53), Expect = 1.0
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 7 PNNSPQNRHPQPNPSHNSHNQTSPKNSPSRHLTAPTN 117
P+ SP + P +P+ S++ TSP SP+ +PT+
Sbjct: 1618 PSYSPTS--PSYSPTSPSYSPTSPSYSPTSPSYSPTS 1652
Score = 25.4 bits (53), Expect = 1.0
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 7 PNNSPQNRHPQPNPSHNSHNQTSPKNSPSRHLTAPTN 117
P+ SP + P +P+ S++ TSP SP+ +PT+
Sbjct: 1625 PSYSPTS--PSYSPTSPSYSPTSPSYSPTSPSYSPTS 1659
Score = 25.4 bits (53), Expect = 1.0
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 7 PNNSPQNRHPQPNPSHNSHNQTSPKNSPSRHLTAPTN 117
P+ SP + P +P+ S++ TSP SP+ +PT+
Sbjct: 1632 PSYSPTS--PSYSPTSPSYSPTSPSYSPTSPSYSPTS 1666
Score = 25.4 bits (53), Expect = 1.0
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 7 PNNSPQNRHPQPNPSHNSHNQTSPKNSPSRHLTAPTN 117
P+ SP + P +P+ S++ TSP SP+ +PT+
Sbjct: 1639 PSYSPTS--PSYSPTSPSYSPTSPSYSPTSPSYSPTS 1673
Score = 25.4 bits (53), Expect = 1.0
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 7 PNNSPQNRHPQPNPSHNSHNQTSPKNSPSRHLTAPTN 117
P+ SP + P +P+ S++ TSP SP+ +PT+
Sbjct: 1646 PSYSPTS--PSYSPTSPSYSPTSPSYSPTSPSYSPTS 1680
Score = 25.4 bits (53), Expect = 1.0
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 7 PNNSPQNRHPQPNPSHNSHNQTSPKNSPSRHLTAPTN 117
P+ SP + P +P+ S++ TSP SP+ +PT+
Sbjct: 1653 PSYSPTS--PSYSPTSPSYSPTSPSYSPTSPSYSPTS 1687
Score = 25.4 bits (53), Expect = 1.0
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 7 PNNSPQNRHPQPNPSHNSHNQTSPKNSPSRHLTAPTN 117
P+ SP + P +P+ S++ TSP SP+ +PT+
Sbjct: 1660 PSYSPTS--PSYSPTSPSYSPTSPSYSPTSPSYSPTS 1694
Score = 25.4 bits (53), Expect = 1.0
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 7 PNNSPQNRHPQPNPSHNSHNQTSPKNSPSRHLTAPTN 117
P+ SP + P +P+ S++ TSP SP+ +PT+
Sbjct: 1667 PSYSPTS--PSYSPTSPSYSPTSPSYSPTSPSYSPTS 1701
Score = 25.4 bits (53), Expect = 1.0
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 7 PNNSPQNRHPQPNPSHNSHNQTSPKNSPSRHLTAPTN 117
P+ SP + P +P+ S++ TSP SP+ +PT+
Sbjct: 1674 PSYSPTS--PSYSPTSPSYSPTSPSYSPTSPSYSPTS 1708
Score = 25.4 bits (53), Expect = 1.0
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 7 PNNSPQNRHPQPNPSHNSHNQTSPKNSPSRHLTAPTN 117
P+ SP + P +P+ S++ TSP SP+ +PT+
Sbjct: 1681 PSYSPTS--PSYSPTSPSYSPTSPSYSPTSPSYSPTS 1715
Score = 25.4 bits (53), Expect = 1.0
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 7 PNNSPQNRHPQPNPSHNSHNQTSPKNSPSRHLTAPTN 117
P+ SP + P +P+ S++ TSP SP+ +PT+
Sbjct: 1688 PSYSPTS--PSYSPTSPSYSPTSPSYSPTSPSYSPTS 1722
Score = 25.4 bits (53), Expect = 1.0
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 7 PNNSPQNRHPQPNPSHNSHNQTSPKNSPSRHLTAPTN 117
P+ SP + P +P+ S++ TSP SP+ +PT+
Sbjct: 1695 PSYSPTS--PSYSPTSPSYSPTSPSYSPTSPSYSPTS 1729
Score = 25.4 bits (53), Expect = 1.0
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 7 PNNSPQNRHPQPNPSHNSHNQTSPKNSPSRHLTAPTN 117
P+ SP + P +P+ S++ TSP SP+ +PT+
Sbjct: 1702 PSYSPTS--PSYSPTSPSYSPTSPSYSPTSPSYSPTS 1736
Score = 25.4 bits (53), Expect = 1.0
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 7 PNNSPQNRHPQPNPSHNSHNQTSPKNSPSRHLTAPTN 117
P+ SP + P +P+ S++ TSP SP+ +PT+
Sbjct: 1709 PSYSPTS--PSYSPTSPSYSPTSPSYSPTSPSYSPTS 1743
Score = 25.4 bits (53), Expect = 1.0
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 7 PNNSPQNRHPQPNPSHNSHNQTSPKNSPSRHLTAPTN 117
P+ SP + P +P+ S++ TSP SP+ +PT+
Sbjct: 1716 PSYSPTS--PSYSPTSPSYSPTSPSYSPTSPSYSPTS 1750
Score = 25.0 bits (52), Expect = 1.4
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +1
Query: 7 PNNSPQNRHPQPNPSHNSHNQTSPKNSPSRHLTAPTN 117
P++ + P PS S++ TSP SP+ +PT+
Sbjct: 1560 PSSPGYSTSPAYMPSSPSYSPTSPSYSPTSPSYSPTS 1596
Score = 23.8 bits (49), Expect = 3.2
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +1
Query: 34 PQPNPSHNSHNQTSPKNSPSRHLTAPTN 117
P +P+ S++ TSP SP+ +PT+
Sbjct: 1576 PSYSPTSPSYSPTSPSYSPTSPSYSPTS 1603
Score = 22.2 bits (45), Expect = 9.6
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 7 PNNSPQNRHPQPNPSHNSHNQTSPKNSPSRHLTAPTN 117
P+ SP + P + + S++ TSP SP+ +PT+
Sbjct: 1597 PSYSPTS--PSYSATSPSYSPTSPSYSPTSPSYSPTS 1631
>SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 604
Score = 24.6 bits (51), Expect = 1.8
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +1
Query: 7 PNNSPQNRHPQPNPSHNSHNQTSPKNSPSR 96
P + +R P P+ S +SH SP S R
Sbjct: 122 PRSDYGSRSPSPHSSVDSHQSRSPVRSRDR 151
>SPAC4D7.10c |||SAGA complex subunit Spt20 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 473
Score = 24.6 bits (51), Expect = 1.8
Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = +1
Query: 1 PHPNNSPQNRHPQPNPSHNSHNQTSPK-NSP 90
P P ++ Q + NP +N T P NSP
Sbjct: 143 PQPGSTNQQQQNNTNPINNQPEDTKPNTNSP 173
>SPBC19G7.08c |||arrestin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 483
Score = 24.2 bits (50), Expect = 2.4
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 37 QPNPSHNSHNQTSPKNSP 90
Q NPS ++HN+T+P P
Sbjct: 136 QDNPSVHTHNRTTPPIPP 153
>SPAC22G7.10 |||mRNA cleavage and polyadenylation specificity factor
complex subunit, Fip1 homolog |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 344
Score = 24.2 bits (50), Expect = 2.4
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +1
Query: 4 HPNNSPQNRHPQPNPSHNSHNQTSPKNSPS 93
H + N + NPS + SP NSP+
Sbjct: 242 HSGAATPNAYVNNNPSSSRRESESPANSPN 271
>SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1076
Score = 24.2 bits (50), Expect = 2.4
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 1 PHPNNSPQNRHPQPNPSHNSHNQTS 75
P PN +P N P P P +S +Q S
Sbjct: 1033 PAPNLTPVNVPPTPPPRKSSASQRS 1057
>SPBC651.09c |||RNA polymerase II associated Paf1 complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 560
Score = 23.8 bits (49), Expect = 3.2
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +1
Query: 34 PQPNPSHNSHNQTSPKNSPS 93
PQP+PS ++ ++PK +PS
Sbjct: 471 PQPSPSLSTSIMSTPKLNPS 490
>SPCC1739.15 |wtf21|SPCC1739.15, SPCC1739.15|wtf element
Wtf21|Schizosaccharomyces pombe|chr 3|||Manual
Length = 329
Score = 23.8 bits (49), Expect = 3.2
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +1
Query: 13 NSPQNRHPQPNPSHNSHNQT 72
N+P N H + NPS ++ N +
Sbjct: 52 NNPPNTHRENNPSRSTDNSS 71
>SPAC23E2.01 |fep1|gaf2|iron-sensing transcription factor
Fep1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 564
Score = 23.8 bits (49), Expect = 3.2
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 49 SHNSHNQTSPKNSPS 93
SHN H +SP + PS
Sbjct: 154 SHNQHEDSSPPHEPS 168
Score = 23.8 bits (49), Expect = 3.2
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +1
Query: 4 HPNNSPQNRHPQPNPSHNSHNQTSPKNS 87
+P P N QP+ S+ ++ SP S
Sbjct: 445 NPEEPPSNSDKQPSMSNGPKSEVSPSQS 472
>SPAC1687.10 |mcp1||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 661
Score = 23.8 bits (49), Expect = 3.2
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 13 NSPQNRHPQPNPSHNSHNQTSPKNSPSRHLT 105
+SP Q N S N ++++SP++SP T
Sbjct: 404 HSPPILQNQENISSNDNSKSSPESSPPARKT 434
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 23.8 bits (49), Expect = 3.2
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = +1
Query: 58 SHNQTSPKNSPSR 96
++NQTSP+N PS+
Sbjct: 1595 NNNQTSPQNKPSK 1607
>SPCC1919.12c |||aminopeptidase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 843
Score = 23.4 bits (48), Expect = 4.2
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 1 PHPNNSPQNRH 33
PHP NS QN H
Sbjct: 70 PHPYNSKQNEH 80
>SPCC1442.13c |||RNA-binding protein, G-pathc
type|Schizosaccharomyces pombe|chr 3|||Manual
Length = 207
Score = 23.4 bits (48), Expect = 4.2
Identities = 9/28 (32%), Positives = 12/28 (42%)
Frame = +1
Query: 22 QNRHPQPNPSHNSHNQTSPKNSPSRHLT 105
+N P P PK PS+HL+
Sbjct: 17 ENVEASPKPPPRKPKIVQPKKKPSKHLS 44
>SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1016
Score = 23.4 bits (48), Expect = 4.2
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +1
Query: 28 RHPQPNPSHNSHNQTSPKNSPSRH 99
+H Q + H H+ K+S S+H
Sbjct: 547 QHKQKSSHHKHHHHKKSKSSSSKH 570
>SPAP8A3.13c |||Vid 24 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 547
Score = 23.4 bits (48), Expect = 4.2
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 34 PQPNPSHNSHNQTSPKNSPSRH 99
P PNPS+N+ N P+ S H
Sbjct: 75 PLPNPSNNNDNIFHPQVHSSFH 96
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 23.4 bits (48), Expect = 4.2
Identities = 10/34 (29%), Positives = 11/34 (32%)
Frame = +1
Query: 1 PHPNNSPQNRHPQPNPSHNSHNQTSPKNSPSRHL 102
P P Q PQ P H Q P + L
Sbjct: 163 PVPLQQQQQSQPQQQPQQQQHQQPQQPQPPQQPL 196
>SPBC32H8.02c |nep2|mug120|nedd8 protease Nep2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 415
Score = 23.4 bits (48), Expect = 4.2
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 9/38 (23%)
Frame = +1
Query: 7 PNNSPQNR-------HP--QPNPSHNSHNQTSPKNSPS 93
P++ PQ+R HP +PNP +S +SP PS
Sbjct: 336 PSSQPQSRSESLPLTHPNSEPNPKLDSQPNSSPVRRPS 373
>SPBC16E9.11c |pub3||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 786
Score = 23.4 bits (48), Expect = 4.2
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +1
Query: 43 NPSHNSHNQTSPKNSPSRHLTAPTN 117
NP HN+ + + N +RHL +N
Sbjct: 272 NPVHNTSSDSQRLNHQNRHLPDDSN 296
>SPCP25A2.03 |||THO complex subunit |Schizosaccharomyces pombe|chr
3|||Manual
Length = 752
Score = 23.4 bits (48), Expect = 4.2
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -2
Query: 110 GAVKCLLGEFLGLVWLCELWEGLGC 36
G+V+ + E + + +LW+GLGC
Sbjct: 383 GSVQRTIKEIIHIEGNWKLWKGLGC 407
>SPBP8B7.27 |mug30||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 807
Score = 23.0 bits (47), Expect = 5.5
Identities = 9/24 (37%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = -2
Query: 98 CLLGEFLGLVWLCELWE-GLGCGC 30
C++ +F+ L ELWE + C C
Sbjct: 363 CIMADFINLYHDFELWEQKINCFC 386
>SPCC162.07 |ent1||epsin|Schizosaccharomyces pombe|chr 3|||Manual
Length = 706
Score = 23.0 bits (47), Expect = 5.5
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +1
Query: 22 QNRHPQPNPSHNSHNQTSPK 81
++R P P+ HNS + P+
Sbjct: 215 RSRRPSPSAEHNSAEENDPE 234
>SPAC23C11.11 |cka1|orb5|serine/threonine protein kinase
Cka1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 332
Score = 22.6 bits (46), Expect = 7.3
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = +3
Query: 108 PHQLLLDHKKK 140
PH +++DHKK+
Sbjct: 163 PHNVMIDHKKR 173
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 22.6 bits (46), Expect = 7.3
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +1
Query: 37 QPNPSHNSHNQTSPKNSPSRHLTAPTNYF*IIKKK 141
Q + NS++QTSP+ + R+ T + + K+K
Sbjct: 1093 QAEDTKNSYDQTSPEATQERNRTISSKLAEMEKQK 1127
>SPAC637.07 |moe1||translation initiation factor eIF3d
Moe1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 567
Score = 22.6 bits (46), Expect = 7.3
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +1
Query: 34 PQPNPSHNSHNQTSP 78
P PNP +NS ++ P
Sbjct: 356 PHPNPFYNSKEESEP 370
>SPBC19C2.02 |pmt1||DNA methyltransferase
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 330
Score = 22.6 bits (46), Expect = 7.3
Identities = 6/19 (31%), Positives = 12/19 (63%)
Frame = -3
Query: 127 SKSNWWGLSSVYLESSWGL 71
S+S W+GL+ + + W +
Sbjct: 161 SRSRWYGLARLNFKGEWSI 179
>SPCC31H12.03c |||transcriptional regulator|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 245
Score = 22.6 bits (46), Expect = 7.3
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = +1
Query: 10 NNSPQNRHPQPNPSHNSHNQTSPKNSPSR 96
NN N+ P NS ++ KN+P +
Sbjct: 184 NNKNHNQSKNPQNRSNSRSKQRNKNAPPK 212
Score = 22.2 bits (45), Expect = 9.6
Identities = 8/38 (21%), Positives = 22/38 (57%)
Frame = +1
Query: 1 PHPNNSPQNRHPQPNPSHNSHNQTSPKNSPSRHLTAPT 114
P +++ +N + NP + S++++ +N + +AP+
Sbjct: 179 PLASSNNKNHNQSKNPQNRSNSRSKQRNKNAPPKSAPS 216
>SPAP27G11.05c |vps41||vacuolar protein sorting-associated protein
Vps41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 886
Score = 22.6 bits (46), Expect = 7.3
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1
Query: 19 PQNRHPQPNPSHNSHN 66
P + H P+PS NSH+
Sbjct: 327 PSDYHLLPDPSSNSHS 342
>SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1008
Score = 22.6 bits (46), Expect = 7.3
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = +1
Query: 7 PNNSPQNRHPQPNPSHNSHNQTSPKNSPSRHLTA 108
P P + P+ NP N + ++PS+ L A
Sbjct: 450 PRKVPPSTVPKMNPKLQGGNSVTAPSTPSKVLPA 483
>SPCC4G3.12c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 821
Score = 22.6 bits (46), Expect = 7.3
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +1
Query: 7 PNNSPQNRHPQPNPSHNSHNQTSPKNSPS 93
P S N HP P N+ + NSPS
Sbjct: 197 PLQSINNEHPLPTVLENNALLNNSGNSPS 225
>SPAC7D4.03c |||conserved fungal family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 886
Score = 22.6 bits (46), Expect = 7.3
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +1
Query: 13 NSPQNRHPQPNPSHNSHNQTSP 78
N P N P + S +S TSP
Sbjct: 89 NEPYNESPSSSSSDSSSRSTSP 110
>SPBC17G9.08c |csx2||Arf GAP protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 870
Score = 22.2 bits (45), Expect = 9.6
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +1
Query: 1 PHPNNSPQNRHPQPNPSHNSHNQTSPKNSP 90
P P NSP P NP +QT P++ P
Sbjct: 228 PLPINSP----PLTNPVARDIDQTEPEDGP 253
>SPBC29B5.01 |atf1|mts1, sss1, gad7|transcription factor
Atf1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 566
Score = 22.2 bits (45), Expect = 9.6
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +1
Query: 46 PSHNSHNQTSPKNS 87
PS N++NQ+SP +S
Sbjct: 429 PSSNANNQSSPTSS 442
>SPBC23G7.04c |nif1||SEL1 repear protein Nif1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 681
Score = 22.2 bits (45), Expect = 9.6
Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = +1
Query: 7 PNNSPQNRHPQPNPSHNSHNQTSPKNSP-SRHLTAP 111
P + N P PN ++H PK +R T+P
Sbjct: 188 PPRTASNTSPTPNSIKSAHPAEPPKRPAFTRSATSP 223
>SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 736
Score = 22.2 bits (45), Expect = 9.6
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = +1
Query: 10 NNSPQNRHPQPNPSHNSHNQTSPKNSPSR 96
N++ P +P H S P+ +PSR
Sbjct: 294 NDTSFTNVPTSSPLHQSTTANHPEKTPSR 322
>SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter
Trk2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 880
Score = 22.2 bits (45), Expect = 9.6
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +1
Query: 4 HPNNSPQNRHPQPNPSHNSHN 66
H N + N H N S +SHN
Sbjct: 281 HENQTQLNHHLDNNSSISSHN 301
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 22.2 bits (45), Expect = 9.6
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 34 PQPNPSHNSHNQTSPKNSPSRHLTAPTN 117
P P P ++ +SP NSP R + AP +
Sbjct: 253 PPPIPPPSNGTVSSPPNSPPRPI-APVS 279
>SPBC17A3.06 |||phosphoprotein phosphatase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 330
Score = 22.2 bits (45), Expect = 9.6
Identities = 6/11 (54%), Positives = 7/11 (63%)
Frame = -2
Query: 53 WEGLGCGCRFW 21
W+GL C C W
Sbjct: 301 WQGLQCSCLQW 311
>SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1337
Score = 22.2 bits (45), Expect = 9.6
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +1
Query: 19 PQNRHPQPNPSHNSHNQTSPKNSPSRHL 102
PQ NPS +S + +S + S HL
Sbjct: 123 PQQPSHSQNPSSSSSSSSSQSSQHSTHL 150
>SPAC2E12.02 |hsf1|hstf, hsf|transcription factor
Hsf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 609
Score = 22.2 bits (45), Expect = 9.6
Identities = 10/38 (26%), Positives = 18/38 (47%)
Frame = +1
Query: 4 HPNNSPQNRHPQPNPSHNSHNQTSPKNSPSRHLTAPTN 117
+PN+ + HNS+ + + PS +L+ TN
Sbjct: 403 YPNSLYPVNNTSSEQHHNSYRGSVSNSQPSGNLSESTN 440
>SPCC11E10.07c |||translation initiation factor eIF2B alpha
subunit|Schizosaccharomyces pombe|chr 3|||Manual
Length = 341
Score = 22.2 bits (45), Expect = 9.6
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 9/41 (21%)
Frame = +1
Query: 16 SPQNRHPQPNP-------SHNS--HNQTSPKNSPSRHLTAP 111
SP+ HP+P P HN N+ +N+P+ +T P
Sbjct: 273 SPETVHPEPEPIPTPSDAIHNELIMNEEQIRNNPTLDVTPP 313
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.130 0.431
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 652,372
Number of Sequences: 5004
Number of extensions: 11015
Number of successful extensions: 106
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 103
length of database: 2,362,478
effective HSP length: 27
effective length of database: 2,227,370
effective search space used: 42320030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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