Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc6g15
(141 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 29 0.45
AF000265-7|AAB52941.1| 893|Caenorhabditis elegans Hypothetical ... 29 0.60
Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical pr... 27 1.8
Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical pr... 27 1.8
Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical pr... 27 1.8
Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr... 27 1.8
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr... 27 1.8
Z66515-3|CAA91352.1| 322|Caenorhabditis elegans Hypothetical pr... 27 2.4
Z66515-2|CAA91353.1| 543|Caenorhabditis elegans Hypothetical pr... 27 2.4
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 27 2.4
S66936-1|AAB28820.1| 360|Caenorhabditis elegans Egl-43 protein. 27 2.4
S66757-1|AAB28819.1| 581|Caenorhabditis elegans Egl-43 protein. 27 2.4
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 27 2.4
AF300704-1|AAG24400.1| 622|Caenorhabditis elegans incenp-like p... 27 2.4
AC025716-5|AAK39616.1| 622|Caenorhabditis elegans Incenp homolo... 27 2.4
Z81497-7|CAB04083.3| 652|Caenorhabditis elegans Hypothetical pr... 26 3.2
Z75955-17|CAB00127.3| 652|Caenorhabditis elegans Hypothetical p... 26 3.2
Z66521-10|CAH10788.1| 359|Caenorhabditis elegans Hypothetical p... 26 4.2
Z66521-9|CAA91402.1| 367|Caenorhabditis elegans Hypothetical pr... 26 4.2
AC025722-7|AAK68510.1| 540|Caenorhabditis elegans Hypothetical ... 26 4.2
Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z78415-7|CAH60759.1| 844|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z78415-5|CAB01670.1| 925|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z70750-13|CAA94745.2| 679|Caenorhabditis elegans Hypothetical p... 25 5.6
Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p... 25 5.6
Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z69634-3|CAA93454.4| 553|Caenorhabditis elegans Hypothetical pr... 25 5.6
AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein. 25 5.6
AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein... 25 5.6
AF239998-1|AAF63494.1| 679|Caenorhabditis elegans MDF-1 protein. 25 5.6
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 25 5.6
Z82266-17|CAJ80813.1| 446|Caenorhabditis elegans Hypothetical p... 25 7.3
Z82266-16|CAJ80812.1| 423|Caenorhabditis elegans Hypothetical p... 25 7.3
Z82266-15|CAD36491.1| 608|Caenorhabditis elegans Hypothetical p... 25 7.3
Z82266-14|CAD36490.1| 467|Caenorhabditis elegans Hypothetical p... 25 7.3
Z82266-10|CAJ80811.1| 331|Caenorhabditis elegans Hypothetical p... 25 7.3
Z81547-4|CAB04458.1| 368|Caenorhabditis elegans Hypothetical pr... 25 7.3
Z69661-2|CAA93494.1| 925|Caenorhabditis elegans Hypothetical pr... 25 7.3
Z68213-11|CAJ80817.1| 446|Caenorhabditis elegans Hypothetical p... 25 7.3
Z68213-10|CAJ80816.1| 423|Caenorhabditis elegans Hypothetical p... 25 7.3
Z68213-9|CAD37352.1| 608|Caenorhabditis elegans Hypothetical pr... 25 7.3
Z68213-8|CAA92439.3| 467|Caenorhabditis elegans Hypothetical pr... 25 7.3
U97012-9|AAK39142.2| 995|Caenorhabditis elegans Hypothetical pr... 25 7.3
U41544-3|AAA83185.3| 439|Caenorhabditis elegans Gex interacting... 25 7.3
Z81555-3|CAB04513.1| 221|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z81134-7|CAD56602.1| 879|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z14092-9|CAA78474.1| 1429|Caenorhabditis elegans Hypothetical pr... 25 9.7
U88167-2|AAB42225.3| 908|Caenorhabditis elegans Hypothetical pr... 25 9.7
U41035-2|AAM69088.1| 1371|Caenorhabditis elegans Uncoordinated p... 25 9.7
U41035-1|AAB37028.2| 1563|Caenorhabditis elegans Uncoordinated p... 25 9.7
U41017-6|AAC48215.1| 399|Caenorhabditis elegans C.elegans homeo... 25 9.7
U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical pr... 25 9.7
M12069-1|AAA70191.1| 1429|Caenorhabditis elegans protein ( C.ele... 25 9.7
AL117202-32|CAD56611.1| 879|Caenorhabditis elegans Hypothetical... 25 9.7
AF257062-1|AAK49331.1| 1563|Caenorhabditis elegans Rab3-interact... 25 9.7
AF026555-1|AAB97516.1| 221|Caenorhabditis elegans GATA transcri... 25 9.7
AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical... 25 9.7
AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical ... 25 9.7
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 29.1 bits (62), Expect = 0.45
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +1
Query: 1 PHPNNSPQNRHPQPNPSHNSHNQTSPKNSPSRHLTAP 111
PHP+ P P P+PS P+ S S H AP
Sbjct: 90 PHPSGPP--HRPHPHPSRRPRPTRLPRPSRSPHSDAP 124
>AF000265-7|AAB52941.1| 893|Caenorhabditis elegans Hypothetical
protein C18E3.3 protein.
Length = 893
Score = 28.7 bits (61), Expect = 0.60
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 43 NPSHNSHNQTSPKNSPSRHLTAPTNYF 123
NP NS ++ S +NSPS ++ PT+ F
Sbjct: 416 NPRLNSGDEDSTRNSPSSVISPPTSVF 442
>Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical
protein F25H8.5c protein.
Length = 732
Score = 27.1 bits (57), Expect = 1.8
Identities = 10/37 (27%), Positives = 15/37 (40%)
Frame = +1
Query: 1 PHPNNSPQNRHPQPNPSHNSHNQTSPKNSPSRHLTAP 111
P P Q ++PQP P + P+ P + P
Sbjct: 153 PQPPQPQQQQYPQPQPQRGGCTYSQPQPQPQQQPQPP 189
>Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical
protein F25H8.5b protein.
Length = 369
Score = 27.1 bits (57), Expect = 1.8
Identities = 10/37 (27%), Positives = 15/37 (40%)
Frame = +1
Query: 1 PHPNNSPQNRHPQPNPSHNSHNQTSPKNSPSRHLTAP 111
P P Q ++PQP P + P+ P + P
Sbjct: 153 PQPPQPQQQQYPQPQPQRGGCTYSQPQPQPQQQPQPP 189
>Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical
protein F25H8.5a protein.
Length = 780
Score = 27.1 bits (57), Expect = 1.8
Identities = 10/37 (27%), Positives = 15/37 (40%)
Frame = +1
Query: 1 PHPNNSPQNRHPQPNPSHNSHNQTSPKNSPSRHLTAP 111
P P Q ++PQP P + P+ P + P
Sbjct: 153 PQPPQPQQQQYPQPQPQRGGCTYSQPQPQPQQQPQPP 189
>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical protein
C46C2.1b protein.
Length = 1677
Score = 27.1 bits (57), Expect = 1.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +1
Query: 19 PQNRHPQPNPSHNSHNQTSPKNSPSRHLTA 108
P++ H QP+P H+ H Q + + P H +A
Sbjct: 1612 PRHHHHQPHPPHHPHLQ-NHYHPPQNHTSA 1640
>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical protein
C46C2.1a protein.
Length = 1838
Score = 27.1 bits (57), Expect = 1.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +1
Query: 19 PQNRHPQPNPSHNSHNQTSPKNSPSRHLTA 108
P++ H QP+P H+ H Q + + P H +A
Sbjct: 1773 PRHHHHQPHPPHHPHLQ-NHYHPPQNHTSA 1801
>Z66515-3|CAA91352.1| 322|Caenorhabditis elegans Hypothetical
protein R53.3b protein.
Length = 322
Score = 26.6 bits (56), Expect = 2.4
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
Frame = +1
Query: 22 QNRHPQPNPS---HNSHNQTSPKNSPSRHLTAPT 114
+N H +PN S HN H Q S NS S T T
Sbjct: 271 RNIHNKPNTSLTPHNHHRQRSLHNSTSTSTTTTT 304
>Z66515-2|CAA91353.1| 543|Caenorhabditis elegans Hypothetical
protein R53.3a protein.
Length = 543
Score = 26.6 bits (56), Expect = 2.4
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
Frame = +1
Query: 22 QNRHPQPNPS---HNSHNQTSPKNSPSRHLTAPT 114
+N H +PN S HN H Q S NS S T T
Sbjct: 492 RNIHNKPNTSLTPHNHHRQRSLHNSTSTSTTTTT 525
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 26.6 bits (56), Expect = 2.4
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +1
Query: 7 PNNSPQNRHPQPNPSHNSHNQTSPKNSPSRHLTAPTN 117
P+ SP + P +PS S++ +SP+ SP+ +PT+
Sbjct: 1652 PSYSPSS--PSYSPSSPSYSPSSPRYSPTSPTYSPTS 1686
Score = 26.2 bits (55), Expect = 3.2
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 7 PNNSPQNRHPQPNPSHNSHNQTSPKNSPSRHLTAPTN 117
P+ SP + P +PS S++ +SP SPS +PT+
Sbjct: 1645 PSYSPTS--PSYSPSSPSYSPSSPSYSPSSPRYSPTS 1679
Score = 25.4 bits (53), Expect = 5.6
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 7 PNNSPQNRHPQPNPSHNSHNQTSPKNSPSRHLTAPTN 117
P+ SP + P +P+ S++ TSP SP+ +PT+
Sbjct: 1610 PSYSPTS--PSYSPTSPSYSPTSPSYSPTSPSYSPTS 1644
Score = 25.4 bits (53), Expect = 5.6
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 7 PNNSPQNRHPQPNPSHNSHNQTSPKNSPSRHLTAPTN 117
P+ SP + P +P+ S++ TSP SP+ +PT+
Sbjct: 1617 PSYSPTS--PSYSPTSPSYSPTSPSYSPTSPSYSPTS 1651
Score = 25.0 bits (52), Expect = 7.3
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 7 PNNSPQNRHPQPNPSHNSHNQTSPKNSPSRHLTAPTN 117
P+ SP + P +P+ S++ TSP SPS +P++
Sbjct: 1631 PSYSPTS--PSYSPTSPSYSPTSPSYSPSSPSYSPSS 1665
Score = 25.0 bits (52), Expect = 7.3
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 7 PNNSPQNRHPQPNPSHNSHNQTSPKNSPSRHLTAPTN 117
P+ SP + P +PS ++ TSP SP+ +PT+
Sbjct: 1659 PSYSPSS--PSYSPSSPRYSPTSPTYSPTSPTYSPTS 1693
Score = 25.0 bits (52), Expect = 7.3
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +1
Query: 7 PNNSPQNRHPQPNPSHNSHNQTSPKNSPSRHLTAPTN 117
P+ SP + P+ +P+ +++ TSP SP+ +PT+
Sbjct: 1666 PSYSPSS--PRYSPTSPTYSPTSPTYSPTSPTYSPTS 1700
Score = 24.6 bits (51), Expect = 9.7
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +1
Query: 7 PNNSPQNRHPQPNPSHNSHNQTSPKNSPSRHLTAPTN 117
P+ SP + +P S++ TSP SP+ +PT+
Sbjct: 1594 PSYSPTSPAAGQSPVSPSYSPTSPSYSPTSPSYSPTS 1630
Score = 24.6 bits (51), Expect = 9.7
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 34 PQPNPSHNSHNQTSPKNSPSRHLTAPTN 117
PQ +P+ +++ TSP +PS +PT+
Sbjct: 1776 PQYSPTSPTYSPTSPSYTPSSPQYSPTS 1803
>S66936-1|AAB28820.1| 360|Caenorhabditis elegans Egl-43 protein.
Length = 360
Score = 26.6 bits (56), Expect = 2.4
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
Frame = +1
Query: 22 QNRHPQPNPS---HNSHNQTSPKNSPSRHLTAPT 114
+N H +PN S HN H Q S NS S T T
Sbjct: 271 RNIHNKPNTSLTPHNHHRQRSLHNSTSTSTTTTT 304
>S66757-1|AAB28819.1| 581|Caenorhabditis elegans Egl-43 protein.
Length = 581
Score = 26.6 bits (56), Expect = 2.4
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
Frame = +1
Query: 22 QNRHPQPNPS---HNSHNQTSPKNSPSRHLTAPT 114
+N H +PN S HN H Q S NS S T T
Sbjct: 492 RNIHNKPNTSLTPHNHHRQRSLHNSTSTSTTTTT 525
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
RNA polymeraseII largest subunit (ama-1 IV) gene,
complete cds. ).
Length = 1859
Score = 26.6 bits (56), Expect = 2.4
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +1
Query: 7 PNNSPQNRHPQPNPSHNSHNQTSPKNSPSRHLTAPTN 117
P+ SP + P +PS S++ +SP+ SP+ +PT+
Sbjct: 1659 PSYSPSS--PSYSPSSPSYSPSSPRYSPTSPTYSPTS 1693
Score = 26.2 bits (55), Expect = 3.2
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 7 PNNSPQNRHPQPNPSHNSHNQTSPKNSPSRHLTAPTN 117
P+ SP + P +PS S++ +SP SPS +PT+
Sbjct: 1652 PSYSPTS--PSYSPSSPSYSPSSPSYSPSSPRYSPTS 1686
Score = 25.4 bits (53), Expect = 5.6
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 7 PNNSPQNRHPQPNPSHNSHNQTSPKNSPSRHLTAPTN 117
P+ SP + P +P+ S++ TSP SP+ +PT+
Sbjct: 1617 PSYSPTS--PSYSPTSPSYSPTSPSYSPTSPSYSPTS 1651
Score = 25.4 bits (53), Expect = 5.6
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 7 PNNSPQNRHPQPNPSHNSHNQTSPKNSPSRHLTAPTN 117
P+ SP + P +P+ S++ TSP SP+ +PT+
Sbjct: 1624 PSYSPTS--PSYSPTSPSYSPTSPSYSPTSPSYSPTS 1658
Score = 25.0 bits (52), Expect = 7.3
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 7 PNNSPQNRHPQPNPSHNSHNQTSPKNSPSRHLTAPTN 117
P+ SP + P +P+ S++ TSP SPS +P++
Sbjct: 1638 PSYSPTS--PSYSPTSPSYSPTSPSYSPSSPSYSPSS 1672
Score = 25.0 bits (52), Expect = 7.3
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 7 PNNSPQNRHPQPNPSHNSHNQTSPKNSPSRHLTAPTN 117
P+ SP + P +PS ++ TSP SP+ +PT+
Sbjct: 1666 PSYSPSS--PSYSPSSPRYSPTSPTYSPTSPTYSPTS 1700
Score = 25.0 bits (52), Expect = 7.3
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +1
Query: 7 PNNSPQNRHPQPNPSHNSHNQTSPKNSPSRHLTAPTN 117
P+ SP + P+ +P+ +++ TSP SP+ +PT+
Sbjct: 1673 PSYSPSS--PRYSPTSPTYSPTSPTYSPTSPTYSPTS 1707
Score = 24.6 bits (51), Expect = 9.7
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +1
Query: 7 PNNSPQNRHPQPNPSHNSHNQTSPKNSPSRHLTAPTN 117
P+ SP + +P S++ TSP SP+ +PT+
Sbjct: 1601 PSYSPTSPAAGQSPVSPSYSPTSPSYSPTSPSYSPTS 1637
Score = 24.6 bits (51), Expect = 9.7
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 34 PQPNPSHNSHNQTSPKNSPSRHLTAPTN 117
PQ +P+ +++ TSP +PS +PT+
Sbjct: 1783 PQYSPTSPTYSPTSPSYTPSSPQYSPTS 1810
>AF300704-1|AAG24400.1| 622|Caenorhabditis elegans incenp-like
protein ICP-1 protein.
Length = 622
Score = 26.6 bits (56), Expect = 2.4
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1
Query: 13 NSPQNRHPQPNPSHNSHNQTSPKN 84
N+ + P+ NP +HNQ +P+N
Sbjct: 163 NAAYSGTPRRNPPREAHNQATPRN 186
>AC025716-5|AAK39616.1| 622|Caenorhabditis elegans Incenp homolog
protein 1 protein.
Length = 622
Score = 26.6 bits (56), Expect = 2.4
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1
Query: 13 NSPQNRHPQPNPSHNSHNQTSPKN 84
N+ + P+ NP +HNQ +P+N
Sbjct: 163 NAAYSGTPRRNPPREAHNQATPRN 186
>Z81497-7|CAB04083.3| 652|Caenorhabditis elegans Hypothetical
protein R07B7.2 protein.
Length = 652
Score = 26.2 bits (55), Expect = 3.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 22 QNRHPQPNPSHNSHNQTSPKNSPSRH 99
+NR+ P PS + + TSP S SR+
Sbjct: 536 ENRNESPMPSASETDDTSPHTSRSRY 561
>Z75955-17|CAB00127.3| 652|Caenorhabditis elegans Hypothetical
protein R07B7.2 protein.
Length = 652
Score = 26.2 bits (55), Expect = 3.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 22 QNRHPQPNPSHNSHNQTSPKNSPSRH 99
+NR+ P PS + + TSP S SR+
Sbjct: 536 ENRNESPMPSASETDDTSPHTSRSRY 561
>Z66521-10|CAH10788.1| 359|Caenorhabditis elegans Hypothetical
protein W02B12.12b protein.
Length = 359
Score = 25.8 bits (54), Expect = 4.2
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 7 PNNSPQNRHPQPNPSHNSHNQTS 75
P+ S Q+ HP + HN H + S
Sbjct: 50 PSKSSQHHHPASSSHHNHHRKRS 72
>Z66521-9|CAA91402.1| 367|Caenorhabditis elegans Hypothetical
protein W02B12.12a protein.
Length = 367
Score = 25.8 bits (54), Expect = 4.2
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 7 PNNSPQNRHPQPNPSHNSHNQTS 75
P+ S Q+ HP + HN H + S
Sbjct: 50 PSKSSQHHHPASSSHHNHHRKRS 72
>AC025722-7|AAK68510.1| 540|Caenorhabditis elegans Hypothetical
protein Y50D4C.5 protein.
Length = 540
Score = 25.8 bits (54), Expect = 4.2
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 7 PNNSPQNRHPQPNPSHNSHNQTSPKNSP 90
PNN + R P + S N+ N P NSP
Sbjct: 13 PNNHYRPRSPTQSYSSNATNYEQPWNSP 40
>Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical protein
C10C6.1 protein.
Length = 1565
Score = 25.4 bits (53), Expect = 5.6
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 34 PQPNPSHNSHNQTSPKNSPSRHLTAPT 114
P P P H+ H TS +S + TAP+
Sbjct: 1141 PHPLPLHHEHPLTSHDSSAASSSTAPS 1167
>Z78415-7|CAH60759.1| 844|Caenorhabditis elegans Hypothetical
protein C17G1.4b protein.
Length = 844
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Frame = +1
Query: 1 PHPNNSPQNRHPQ--PNPSHNSHNQTSPKN 84
P N + PQ P P++NSH Q P N
Sbjct: 103 PPQNQRSGGQAPQNGPPPNYNSHQQMPPNN 132
>Z78415-5|CAB01670.1| 925|Caenorhabditis elegans Hypothetical
protein C17G1.4a protein.
Length = 925
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Frame = +1
Query: 1 PHPNNSPQNRHPQ--PNPSHNSHNQTSPKN 84
P N + PQ P P++NSH Q P N
Sbjct: 103 PPQNQRSGGQAPQNGPPPNYNSHQQMPPNN 132
>Z70750-13|CAA94745.2| 679|Caenorhabditis elegans Hypothetical
protein C50F4.11 protein.
Length = 679
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +1
Query: 13 NSPQNRHPQPNPSHNSHNQTSPKNSPSRHLT 105
NS Q H NP ++HN+ S R LT
Sbjct: 493 NSTQIFHMASNPLQDAHNEFQASESRKRKLT 523
>Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical
protein C47D12.1c protein.
Length = 4053
Score = 25.4 bits (53), Expect = 5.6
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 13 NSPQNRHPQPNPSHNSHNQTSPKNSPSRHLTAPT 114
+ P NR PQ H H + + S RHL APT
Sbjct: 3709 DEPTNRVPQMF-KHLDHVLQTDRESARRHLHAPT 3741
>Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical protein
C47D12.1b protein.
Length = 4061
Score = 25.4 bits (53), Expect = 5.6
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 13 NSPQNRHPQPNPSHNSHNQTSPKNSPSRHLTAPT 114
+ P NR PQ H H + + S RHL APT
Sbjct: 3720 DEPTNRVPQMF-KHLDHVLQTDRESARRHLHAPT 3752
>Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical protein
C47D12.1a protein.
Length = 4064
Score = 25.4 bits (53), Expect = 5.6
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 13 NSPQNRHPQPNPSHNSHNQTSPKNSPSRHLTAPT 114
+ P NR PQ H H + + S RHL APT
Sbjct: 3720 DEPTNRVPQMF-KHLDHVLQTDRESARRHLHAPT 3752
>Z69634-3|CAA93454.4| 553|Caenorhabditis elegans Hypothetical
protein B0001.5 protein.
Length = 553
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/38 (26%), Positives = 20/38 (52%)
Frame = +1
Query: 10 NNSPQNRHPQPNPSHNSHNQTSPKNSPSRHLTAPTNYF 123
NN + R+ PNP + + +++ + +RH T + F
Sbjct: 326 NNFNEPRNMDPNPPYRTRDRSRSMDRSTRHATRRVDEF 363
>AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.
Length = 4064
Score = 25.4 bits (53), Expect = 5.6
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 13 NSPQNRHPQPNPSHNSHNQTSPKNSPSRHLTAPT 114
+ P NR PQ H H + + S RHL APT
Sbjct: 3720 DEPTNRVPQMF-KHLDHVLQTDRESARRHLHAPT 3752
>AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein
protein.
Length = 1565
Score = 25.4 bits (53), Expect = 5.6
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 34 PQPNPSHNSHNQTSPKNSPSRHLTAPT 114
P P P H+ H TS +S + TAP+
Sbjct: 1141 PHPLPLHHEHPLTSHDSSAASSSTAPS 1167
>AF239998-1|AAF63494.1| 679|Caenorhabditis elegans MDF-1 protein.
Length = 679
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +1
Query: 13 NSPQNRHPQPNPSHNSHNQTSPKNSPSRHLT 105
NS Q H NP ++HN+ S R LT
Sbjct: 493 NSTQIFHMASNPLQDAHNEFQASESRKRKLT 523
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 25.4 bits (53), Expect = 5.6
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +1
Query: 7 PNNSPQNRHPQPNPSHNSHNQTSPKNSPSRH 99
P + P HPQ +P S +QT P +H
Sbjct: 535 PASVPMQHHPQQHP---SQHQTQPNQQQQQH 562
>Z82266-17|CAJ80813.1| 446|Caenorhabditis elegans Hypothetical
protein C01F6.6d protein.
Length = 446
Score = 25.0 bits (52), Expect = 7.3
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = +1
Query: 10 NNSPQNRHPQPNPSHNSHNQTSPKNSPSRH 99
++ +H Q + H+ H Q SP ++ S H
Sbjct: 366 SHQKHEQHSQTHHHHHQHQQPSPLSNGSSH 395
>Z82266-16|CAJ80812.1| 423|Caenorhabditis elegans Hypothetical
protein C01F6.6c protein.
Length = 423
Score = 25.0 bits (52), Expect = 7.3
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = +1
Query: 10 NNSPQNRHPQPNPSHNSHNQTSPKNSPSRH 99
++ +H Q + H+ H Q SP ++ S H
Sbjct: 343 SHQKHEQHSQTHHHHHQHQQPSPLSNGSSH 372
>Z82266-15|CAD36491.1| 608|Caenorhabditis elegans Hypothetical
protein C01F6.6b protein.
Length = 608
Score = 25.0 bits (52), Expect = 7.3
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = +1
Query: 10 NNSPQNRHPQPNPSHNSHNQTSPKNSPSRH 99
++ +H Q + H+ H Q SP ++ S H
Sbjct: 528 SHQKHEQHSQTHHHHHQHQQPSPLSNGSSH 557
>Z82266-14|CAD36490.1| 467|Caenorhabditis elegans Hypothetical
protein C01F6.6a protein.
Length = 467
Score = 25.0 bits (52), Expect = 7.3
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = +1
Query: 10 NNSPQNRHPQPNPSHNSHNQTSPKNSPSRH 99
++ +H Q + H+ H Q SP ++ S H
Sbjct: 387 SHQKHEQHSQTHHHHHQHQQPSPLSNGSSH 416
>Z82266-10|CAJ80811.1| 331|Caenorhabditis elegans Hypothetical
protein C01F6.6e protein.
Length = 331
Score = 25.0 bits (52), Expect = 7.3
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = +1
Query: 10 NNSPQNRHPQPNPSHNSHNQTSPKNSPSRH 99
++ +H Q + H+ H Q SP ++ S H
Sbjct: 251 SHQKHEQHSQTHHHHHQHQQPSPLSNGSSH 280
>Z81547-4|CAB04458.1| 368|Caenorhabditis elegans Hypothetical
protein F53F8.5 protein.
Length = 368
Score = 25.0 bits (52), Expect = 7.3
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +1
Query: 7 PNNSPQNRHPQPNPSHNSHNQTSPKNSPS 93
P++S ++ H P H+ H+ +S +PS
Sbjct: 325 PSSSSRSAHHHHQPRHHRHDTSSRGGAPS 353
>Z69661-2|CAA93494.1| 925|Caenorhabditis elegans Hypothetical
protein F48F7.4 protein.
Length = 925
Score = 25.0 bits (52), Expect = 7.3
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +1
Query: 40 PNPSHNSHNQTSPKNSPSRHLTAPTNY 120
P P+ SH T + P +H T P NY
Sbjct: 201 PAPATVSHADTGLQPLPPQHQTHPPNY 227
>Z68213-11|CAJ80817.1| 446|Caenorhabditis elegans Hypothetical
protein C01F6.6d protein.
Length = 446
Score = 25.0 bits (52), Expect = 7.3
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = +1
Query: 10 NNSPQNRHPQPNPSHNSHNQTSPKNSPSRH 99
++ +H Q + H+ H Q SP ++ S H
Sbjct: 366 SHQKHEQHSQTHHHHHQHQQPSPLSNGSSH 395
>Z68213-10|CAJ80816.1| 423|Caenorhabditis elegans Hypothetical
protein C01F6.6c protein.
Length = 423
Score = 25.0 bits (52), Expect = 7.3
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = +1
Query: 10 NNSPQNRHPQPNPSHNSHNQTSPKNSPSRH 99
++ +H Q + H+ H Q SP ++ S H
Sbjct: 343 SHQKHEQHSQTHHHHHQHQQPSPLSNGSSH 372
>Z68213-9|CAD37352.1| 608|Caenorhabditis elegans Hypothetical
protein C01F6.6b protein.
Length = 608
Score = 25.0 bits (52), Expect = 7.3
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = +1
Query: 10 NNSPQNRHPQPNPSHNSHNQTSPKNSPSRH 99
++ +H Q + H+ H Q SP ++ S H
Sbjct: 528 SHQKHEQHSQTHHHHHQHQQPSPLSNGSSH 557
>Z68213-8|CAA92439.3| 467|Caenorhabditis elegans Hypothetical
protein C01F6.6a protein.
Length = 467
Score = 25.0 bits (52), Expect = 7.3
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = +1
Query: 10 NNSPQNRHPQPNPSHNSHNQTSPKNSPSRH 99
++ +H Q + H+ H Q SP ++ S H
Sbjct: 387 SHQKHEQHSQTHHHHHQHQQPSPLSNGSSH 416
>U97012-9|AAK39142.2| 995|Caenorhabditis elegans Hypothetical
protein C04E6.11 protein.
Length = 995
Score = 25.0 bits (52), Expect = 7.3
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -3
Query: 61 VSCGRGWVVDVGFGE 17
V C GW VD FGE
Sbjct: 612 VLCSNGWPVDTDFGE 626
>U41544-3|AAA83185.3| 439|Caenorhabditis elegans Gex interacting
protein protein 15 protein.
Length = 439
Score = 25.0 bits (52), Expect = 7.3
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = +1
Query: 1 PHPNNSPQNRHPQPNPSHNSHNQTSPKNS-PSRHL 102
P P + N P P P N PK++ SRHL
Sbjct: 188 PLPKPANTNGRPAPAPPANDFGNYQPKSALSSRHL 222
>Z81555-3|CAB04513.1| 221|Caenorhabditis elegans Hypothetical
protein F58E10.2 protein.
Length = 221
Score = 24.6 bits (51), Expect = 9.7
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 34 PQPNPSHNSHNQTSPKNSPSRHLT 105
P P S HN T +N PS+H +
Sbjct: 198 PTPEDSKLCHNTTPLQNIPSQHFS 221
>Z81134-7|CAD56602.1| 879|Caenorhabditis elegans Hypothetical
protein T28D6.5b protein.
Length = 879
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = +1
Query: 7 PNNSPQNRHPQPNPSHNSHNQTSPKNSPSR 96
P +SP H Q + +HN+ + + + P+R
Sbjct: 762 PPSSPIQNHIQNHLNHNTESDSEEEEEPAR 791
>Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical protein
F29G6.3b protein.
Length = 1785
Score = 24.6 bits (51), Expect = 9.7
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +1
Query: 7 PNNSPQNRHPQPNPSHNSHNQTSPKNSPSRH 99
P SP+ + N SHN PK SRH
Sbjct: 1200 PQASPRKTISEVNRSHNYIPALPPKEHQSRH 1230
>Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical
protein C40H1.1 protein.
Length = 559
Score = 24.6 bits (51), Expect = 9.7
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +1
Query: 4 HPNNSPQNRHPQPNPSHNSHNQTSP 78
H N +P PN H S+NQ P
Sbjct: 153 HYNQAPMQHFISPNSFHVSYNQRFP 177
>Z14092-9|CAA78474.1| 1429|Caenorhabditis elegans Hypothetical protein
R107.8 protein.
Length = 1429
Score = 24.6 bits (51), Expect = 9.7
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 10 NNSPQNRHPQPNPSHNSHNQTSPKNSPSRHLTAPTN 117
+NS + H P PS S + SP++ + T PT+
Sbjct: 1337 SNSRDSTHLTPPPSDGSTSTPSPQHFMNTTHTTPTS 1372
>U88167-2|AAB42225.3| 908|Caenorhabditis elegans Hypothetical
protein D2092.5 protein.
Length = 908
Score = 24.6 bits (51), Expect = 9.7
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +1
Query: 4 HPNNSPQNRHPQPNPSHNSHNQTSPKNSPSRHLTAPTN 117
H ++S QN H + N + N H + S H T +N
Sbjct: 482 HQHSSHQNNHQKSNGNSNGHARGFAAVRDSSHDTNASN 519
>U41035-2|AAM69088.1| 1371|Caenorhabditis elegans Uncoordinated
protein 10, isoform b protein.
Length = 1371
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 10 NNSPQNRHPQPNPSHNSHNQTSPKN 84
N + Q H Q N + N NQT P+N
Sbjct: 265 NQNQQQSHNQ-NMTQNQRNQTGPQN 288
>U41035-1|AAB37028.2| 1563|Caenorhabditis elegans Uncoordinated
protein 10, isoform a protein.
Length = 1563
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 10 NNSPQNRHPQPNPSHNSHNQTSPKN 84
N + Q H Q N + N NQT P+N
Sbjct: 265 NQNQQQSHNQ-NMTQNQRNQTGPQN 288
>U41017-6|AAC48215.1| 399|Caenorhabditis elegans C.elegans homeobox
protein 39 protein.
Length = 399
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +1
Query: 1 PHPNNSPQNRHPQPNPSHNSHNQTSPKNSPSRHLTAP 111
P+P N+ P P P+ S +T+P+ S + P
Sbjct: 142 PYPVNNYVAALPVPVPAKKSRGRTAPRTPKSLETSKP 178
>U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical
protein R07E4.5 protein.
Length = 817
Score = 24.6 bits (51), Expect = 9.7
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Frame = +1
Query: 1 PHPNNSPQNRHPQPN---PSHNSHNQTSPKNSPSRHL 102
PHP++ Q H QP+ H H P+ S S+HL
Sbjct: 768 PHPHHQ-QMPHHQPHLHHAHHPVHPHRGPRASHSQHL 803
>M12069-1|AAA70191.1| 1429|Caenorhabditis elegans protein ( C.elegans
homeotic lin-12 protein gene, complete cds. ).
Length = 1429
Score = 24.6 bits (51), Expect = 9.7
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 10 NNSPQNRHPQPNPSHNSHNQTSPKNSPSRHLTAPTN 117
+NS + H P PS S + SP++ + T PT+
Sbjct: 1337 SNSRDSTHLTPPPSDGSTSTPSPQHFMNTTHTTPTS 1372
>AL117202-32|CAD56611.1| 879|Caenorhabditis elegans Hypothetical
protein T28D6.5b protein.
Length = 879
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = +1
Query: 7 PNNSPQNRHPQPNPSHNSHNQTSPKNSPSR 96
P +SP H Q + +HN+ + + + P+R
Sbjct: 762 PPSSPIQNHIQNHLNHNTESDSEEEEEPAR 791
>AF257062-1|AAK49331.1| 1563|Caenorhabditis elegans Rab3-interacting
molecule UNC-10 protein.
Length = 1563
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 10 NNSPQNRHPQPNPSHNSHNQTSPKN 84
N + Q H Q N + N NQT P+N
Sbjct: 265 NQNQQQSHNQ-NMTQNQRNQTGPQN 288
>AF026555-1|AAB97516.1| 221|Caenorhabditis elegans GATA
transcription factor END-1 protein.
Length = 221
Score = 24.6 bits (51), Expect = 9.7
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 34 PQPNPSHNSHNQTSPKNSPSRHLT 105
P P S HN T +N PS+H +
Sbjct: 198 PTPEDSKLCHNTTPLQNIPSQHFS 221
>AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical
protein Y22D7AR.1 protein.
Length = 350
Score = 24.6 bits (51), Expect = 9.7
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Frame = +1
Query: 1 PHPNNSPQNR---HPQPNPSHNSHNQTSPKNSPSRHL 102
P P + P +R +P+P P S PK P L
Sbjct: 289 PKPKHKPNSRPKPNPRPKPKPRSKPNPKPKPRPKPEL 325
>AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical
protein ZK973.9 protein.
Length = 233
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 4/33 (12%)
Frame = +1
Query: 7 PNNSPQNRHPQPN----PSHNSHNQTSPKNSPS 93
P +SPQ HP P +H+ P+ +PS
Sbjct: 99 PQHSPQQGHPHPQQGLPAAHHRQQMMPPQAAPS 131
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.130 0.431
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,691,348
Number of Sequences: 27780
Number of extensions: 67167
Number of successful extensions: 590
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 584
length of database: 12,740,198
effective HSP length: 27
effective length of database: 11,990,138
effective search space used: 227812622
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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