Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6g13
         (687 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC069229-1|AAH69229.1|  476|Homo sapiens TIGD5 protein protein.        30   6.7  
BC032632-1|AAH32632.1|  274|Homo sapiens TIGD5 protein protein.        30   6.7  
AK223583-1|BAD97303.1|  593|Homo sapiens tigger transposable ele...    30   6.7  
AK027832-1|BAB55398.1|  274|Homo sapiens protein ( Homo sapiens ...    30   6.7  

>BC069229-1|AAH69229.1|  476|Homo sapiens TIGD5 protein protein.
          Length = 476

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 16/50 (32%), Positives = 23/50 (46%)
 Frame = +2

Query: 284 ASFEHSDDSGASNTAIRDLNGQAVKPLSGSAPSVRVSALGSVSGNDETKD 433
           A + H DD G      R+  G A+ P +  AP+   SA+G     +E  D
Sbjct: 364 AEWLHLDDDGGPPEGCREEVGPALPPAAPPAPASLPSAIGGGEDEEEATD 413


>BC032632-1|AAH32632.1|  274|Homo sapiens TIGD5 protein protein.
          Length = 274

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 16/50 (32%), Positives = 23/50 (46%)
 Frame = +2

Query: 284 ASFEHSDDSGASNTAIRDLNGQAVKPLSGSAPSVRVSALGSVSGNDETKD 433
           A + H DD G      R+  G A+ P +  AP+   SA+G     +E  D
Sbjct: 162 AEWLHLDDDGGPPEGCREEVGPALPPAAPPAPASLPSAIGGGEDEEEATD 211


>AK223583-1|BAD97303.1|  593|Homo sapiens tigger transposable
           element derived 5 variant protein.
          Length = 593

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 16/50 (32%), Positives = 23/50 (46%)
 Frame = +2

Query: 284 ASFEHSDDSGASNTAIRDLNGQAVKPLSGSAPSVRVSALGSVSGNDETKD 433
           A + H DD G      R+  G A+ P +  AP+   SA+G     +E  D
Sbjct: 481 AEWLHLDDDGGPPEGCREEVGPALPPAAPPAPASLPSAIGGGEDEEEATD 530


>AK027832-1|BAB55398.1|  274|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14926 fis, clone PLACE1008947. ).
          Length = 274

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 16/50 (32%), Positives = 23/50 (46%)
 Frame = +2

Query: 284 ASFEHSDDSGASNTAIRDLNGQAVKPLSGSAPSVRVSALGSVSGNDETKD 433
           A + H DD G      R+  G A+ P +  AP+   SA+G     +E  D
Sbjct: 162 AEWLHLDDDGGPPEGCREEVGPALPPAAPPAPASLPSAIGGGEDEEEATD 211


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,420,094
Number of Sequences: 237096
Number of extensions: 2135749
Number of successful extensions: 4549
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4548
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)