Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6g01
         (740 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    22   6.0  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   7.9  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   7.9  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = -1

Query: 299 SGVIFSKTSPDSPNL 255
           SGVI + TSP SP L
Sbjct: 125 SGVISTNTSPPSPIL 139


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 503 FSAPNILIFSICSVTN 456
           FS  N L+FSIC   +
Sbjct: 263 FSIDNALLFSICGAAS 278


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 280 LEKMTPDIKGKPMLVPLTSS 339
           +E +TP+ K +P  VPL S+
Sbjct: 821 VESLTPERKMEPPGVPLNST 840


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,910
Number of Sequences: 336
Number of extensions: 3186
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)