Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6f23
         (617 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    44   1e-06
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    27   0.13 
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    26   0.29 
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    24   0.89 
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    22   3.6  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    22   3.6  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   4.7  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   6.3  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   6.3  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   6.3  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   8.3  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 44.0 bits (99), Expect = 1e-06
 Identities = 33/131 (25%), Positives = 53/131 (40%), Gaps = 9/131 (6%)
 Frame = -1

Query: 386 CDNKPAGRYPMDERLLDTLVLNQHLDKDYSSNEHLYHPTFYLRCFANGAHAVEECPDNYT 207
           CD      Y  +++  +  +  +H D  Y    H    T Y  C+ NG    + C     
Sbjct: 75  CDYPWRSNYCDNKQQANPPISTEHCDWLYGIFGHETSCTRYWTCW-NGTATEQLCIGGLL 133

Query: 206 FDAKTRQCKVNE---------LCENRPDGYILSYFPSNLLVNQFMQCVSGRHVVRECPAN 54
           ++ +T  C   E         LC + P+G +    P     N++ QC  G   ++ CPA 
Sbjct: 134 YNERTHSCDWPENVDGCQKHPLCNDDPNGNV----PLGKSCNRYWQCQGGYPRLQRCPAM 189

Query: 53  KIFDRNLMSCV 21
            +FDR  + CV
Sbjct: 190 LVFDRRSLRCV 200



 Score = 26.2 bits (55), Expect = 0.22
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 446 KCPAYFNFDYAQLKCVPVPPCDN 378
           +CPA   FD   L+CV VPP ++
Sbjct: 185 RCPAMLVFDRRSLRCV-VPPTED 206



 Score = 23.0 bits (47), Expect = 2.1
 Identities = 6/22 (27%), Positives = 15/22 (68%)
 Frame = -1

Query: 110 NQFMQCVSGRHVVRECPANKIF 45
           +++ +CV+G+  + +CP   +F
Sbjct: 43  DRYWECVNGQQELYDCPNGLVF 64



 Score = 22.2 bits (45), Expect = 3.6
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = -1

Query: 266 YLRCFANGAHAVEECPDNYTFDAKTRQCKVNELCE 162
           Y  C  NG   + +CP+   F  K R   V E C+
Sbjct: 45  YWEC-VNGQQELYDCPNGLVFAGKNR--GVTEGCD 76


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 protein.
          Length = 980

 Score = 27.1 bits (57), Expect = 0.13
 Identities = 14/51 (27%), Positives = 23/51 (45%)
 Frame = -1

Query: 176  NELCENRPDGYILSYFPSNLLVNQFMQCVSGRHVVRECPANKIFDRNLMSC 24
            NE+  +  +G+I SY P       +  C   R     CP+N +F+ +   C
Sbjct: 911  NEVTCDEEEGHI-SYHPDKADCRMYYMCEGERKHHMPCPSNLVFNPDQNVC 960


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 25.8 bits (54), Expect = 0.29
 Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
 Frame = -1

Query: 236 AVEECPDNYTFDAKTRQCKVNELCENRPDGYILSYF-PSNLLVNQF 102
           A ++CP+ Y F A   QC     C    DG I     P  ++ N +
Sbjct: 35  ATDQCPEKYGFFADAEQCDKYYECN---DGQITEKLCPDGMVFNDY 77



 Score = 22.6 bits (46), Expect = 2.7
 Identities = 11/45 (24%), Positives = 20/45 (44%)
 Frame = -1

Query: 158 RPDGYILSYFPSNLLVNQFMQCVSGRHVVRECPANKIFDRNLMSC 24
           R  GY     P   + ++F  CV G++ +  CP   +++     C
Sbjct: 109 RKHGYFAHEEPH--ICDKFYYCVDGKYNMITCPNGLVYNDKAGIC 151


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 24.2 bits (50), Expect = 0.89
 Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
 Frame = -1

Query: 188 QCKVNELCENRP-DGYILSYFPSNLLVNQFMQCVSGRHVVRECPANKIFDRNLMSC 24
           +   +ELCENRP D Y       +      ++C         CP+   FD +  +C
Sbjct: 27  EATADELCENRPADEYFRLTTEGD--CRDVVRCTKSGLKQITCPSGLAFDIDKQTC 80


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = -1

Query: 323 NQHLDKDYSSNEHLYH 276
           NQ+ +++Y+ N  +YH
Sbjct: 32  NQNTEQNYTHNNEMYH 47


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = -1

Query: 323 NQHLDKDYSSNEHLYH 276
           NQ+ +++Y+ N  +YH
Sbjct: 32  NQNTEQNYTHNNEMYH 47


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = -1

Query: 101 MQCVSGRHVVRECPANKIFDRNLMSC 24
           +QC S       CPA   FD +  +C
Sbjct: 63  IQCTSSGLQAIRCPAGLYFDIDKQTC 88


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 188 QCKVNELCENRP 153
           +   +ELCENRP
Sbjct: 27  EATADELCENRP 38


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 356 WDNDRRACCRTAAREH 403
           W  +RRA CR   ++H
Sbjct: 116 WFKNRRAKCRQQQKQH 131


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -1

Query: 323 NQHLDKDYSSNEHLYH 276
           NQ+ + +Y+ N  +YH
Sbjct: 32  NQNTEHNYTHNNEMYH 47


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -1

Query: 434 YFNFDYAQLKCVPV 393
           Y N DY  L  VP+
Sbjct: 494 YLNLDYNDLSAVPI 507


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,857
Number of Sequences: 336
Number of extensions: 3494
Number of successful extensions: 18
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)