Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6f21
         (188 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC112213-1|AAI12214.1|  581|Homo sapiens Na+/H+ exchanger isofor...    29   2.6  
AL162615-3|CAI18970.1|  581|Homo sapiens solute carrier family 9...    29   2.6  
AL031685-3|CAI23460.1|  581|Homo sapiens solute carrier family 9...    29   2.6  
AB023156-1|BAA76783.2|  595|Homo sapiens KIAA0939 protein protein.     29   2.6  

>BC112213-1|AAI12214.1|  581|Homo sapiens Na+/H+ exchanger isoform 8
           protein.
          Length = 581

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 14/50 (28%), Positives = 27/50 (54%)
 Frame = +1

Query: 16  RLNRTDVMELYNIKYAIDPTNKIVIEQVDNVDAFVHILXPGQEVFDETLS 165
           +LN TD     ++  A+DP   I I    +VD  +++L  G+ + ++ +S
Sbjct: 184 KLNMTDSFAFGSLISAVDPVATIAIFNALHVDPVLNMLVFGESILNDAVS 233


>AL162615-3|CAI18970.1|  581|Homo sapiens solute carrier family 9
           (sodium/hydrogen exchanger), member 8 protein.
          Length = 581

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 14/50 (28%), Positives = 27/50 (54%)
 Frame = +1

Query: 16  RLNRTDVMELYNIKYAIDPTNKIVIEQVDNVDAFVHILXPGQEVFDETLS 165
           +LN TD     ++  A+DP   I I    +VD  +++L  G+ + ++ +S
Sbjct: 184 KLNMTDSFAFGSLISAVDPVATIAIFNALHVDPVLNMLVFGESILNDAVS 233


>AL031685-3|CAI23460.1|  581|Homo sapiens solute carrier family 9
           (sodium/hydrogen exchanger), member 8 protein.
          Length = 581

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 14/50 (28%), Positives = 27/50 (54%)
 Frame = +1

Query: 16  RLNRTDVMELYNIKYAIDPTNKIVIEQVDNVDAFVHILXPGQEVFDETLS 165
           +LN TD     ++  A+DP   I I    +VD  +++L  G+ + ++ +S
Sbjct: 184 KLNMTDSFAFGSLISAVDPVATIAIFNALHVDPVLNMLVFGESILNDAVS 233


>AB023156-1|BAA76783.2|  595|Homo sapiens KIAA0939 protein protein.
          Length = 595

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 14/50 (28%), Positives = 27/50 (54%)
 Frame = +1

Query: 16  RLNRTDVMELYNIKYAIDPTNKIVIEQVDNVDAFVHILXPGQEVFDETLS 165
           +LN TD     ++  A+DP   I I    +VD  +++L  G+ + ++ +S
Sbjct: 198 KLNMTDSFAFGSLISAVDPVATIAIFNALHVDPVLNMLVFGESILNDAVS 247


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,983,647
Number of Sequences: 237096
Number of extensions: 411876
Number of successful extensions: 892
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 892
length of database: 76,859,062
effective HSP length: 42
effective length of database: 66,901,030
effective search space used: 1338020600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)