Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6f21
         (188 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    20   3.1  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    20   3.1  
DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              19   5.4  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          19   7.2  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    19   7.2  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     19   7.2  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    19   7.2  
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    19   7.2  
DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              18   9.5  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              18   9.5  

>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 19.8 bits (39), Expect = 3.1
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -1

Query: 125 ICTNASTLSTCSITI 81
           +C+ AS L+ C+I++
Sbjct: 107 MCSTASILNLCAISL 121


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
          protein.
          Length = 232

 Score = 19.8 bits (39), Expect = 3.1
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = -1

Query: 92 SITILFVGSIAYLILY 45
          SIT++ +GSI ++I +
Sbjct: 52 SITLIVLGSIIFVISF 67



 Score = 18.6 bits (36), Expect = 7.2
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -1

Query: 161 SVSSNTS*PGXRICTNASTLSTCSIT 84
           S+S     P    C N+   +TCSI+
Sbjct: 150 SLSDYNDKPIPASCCNSPENNTCSIS 175


>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 5/14 (35%), Positives = 9/14 (64%)
 Frame = -3

Query: 75  CWIDCIFNIIQFHN 34
           C++DC+   + F N
Sbjct: 61  CYVDCMLKKVGFVN 74


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +1

Query: 85  VIEQVDNVDAFVHILXPGQEVFDETLS 165
           V+  + N D  VHIL   Q +   TL+
Sbjct: 15  VLLLLTNADNSVHILSKYQLITSTTLN 41


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +1

Query: 40  ELYNIKYAIDPTN 78
           +LYN+K  +D  N
Sbjct: 396 DLYNVKNTLDSYN 408


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 6/23 (26%), Positives = 11/23 (47%)
 Frame = +1

Query: 16  RLNRTDVMELYNIKYAIDPTNKI 84
           R+    + ELY +     PT ++
Sbjct: 579 RIANNTIQELYTLNNMYKPTREV 601


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = +1

Query: 55  KYAIDPTNKIVIEQVDNVDAFVHILXPGQEVFDETLSRY 171
           K AID  +++ +     V+  V +  P   VFD   S +
Sbjct: 127 KIAIDKFDRLWVLDSGLVNRTVPVCAPKLHVFDLKTSNH 165


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 5/13 (38%), Positives = 8/13 (61%)
 Frame = -3

Query: 123 MHKCVHIVDLLYY 85
           +H C   +D LY+
Sbjct: 50  LHSCFQTMDRLYF 62


>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +1

Query: 22  NRTDVMELYNIKYAIDPTNKIVIEQVDNVDAFVHI 126
           N   V E+  I    +  NK++ E     DA +H+
Sbjct: 80  NEVVVREIAEIYLDENEVNKLITECSAISDADIHL 114


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 5/8 (62%), Positives = 6/8 (75%)
 Frame = +3

Query: 165 PVPPISWR 188
           P PP+ WR
Sbjct: 338 PPPPLVWR 345


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,428
Number of Sequences: 438
Number of extensions: 720
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 42
effective length of database: 127,947
effective search space used:  2558940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)