Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6f20
         (482 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    23   7.3  
DQ974174-1|ABJ52814.1|  391|Anopheles gambiae serpin 18 protein.       22   9.6  
AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    22   9.6  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    22   9.6  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    22   9.6  

>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +2

Query: 125 WQNPRQRHXAED*LKIYNRL 184
           W NP  +   +D L  YNRL
Sbjct: 31  WANPDAKRLYDDLLSNYNRL 50


>DQ974174-1|ABJ52814.1|  391|Anopheles gambiae serpin 18 protein.
          Length = 391

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 198 EDSILDVGNFEKYL 239
           + ++L VGNF KY+
Sbjct: 372 DGNVLQVGNFSKYI 385


>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = -2

Query: 223 LPTSKILSSAGCVQSIVNFKLIFRXMPLPRILPPFTP 113
           LP   + SSA  V       L+ +   LP  +PPF P
Sbjct: 88  LPPKGVPSSASPVYMSPASSLMTKATSLPLGVPPFRP 124


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +3

Query: 174 TIDCTHPAEDSILDVGNFEKY 236
           T++CT  +  SI+   NF K+
Sbjct: 503 TLECTSASGYSIVSTSNFNKH 523


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 367 QNVTSRRTICVTGFEWW 417
           QN++S R+I  T FE W
Sbjct: 214 QNISSSRSIEKTPFELW 230


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 438,575
Number of Sequences: 2352
Number of extensions: 8152
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 42285900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)