Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6f16
         (362 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    22   6.2  
AF269153-1|AAF91398.1|  109|Anopheles gambiae labial homeotic pr...    22   6.2  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    22   6.2  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    22   8.1  

>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -3

Query: 204 IRARPPIVMREDEGVASTLPPSTVTSAVVQ 115
           IR +PP+ M +     +   PST   A V+
Sbjct: 818 IRTKPPVYMLQRMAEQTHYDPSTYVRAAVK 847


>AF269153-1|AAF91398.1|  109|Anopheles gambiae labial homeotic
           protein protein.
          Length = 109

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +3

Query: 216 PSPAISATSTRSSNPRFHTPT 278
           P P ++ +   S+ P +H PT
Sbjct: 1   PKPPLTKSLQLSTTPEYHIPT 21


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -3

Query: 111 RSTVTGILRLGAEGKTTAS 55
           +STV GILR+   G+T  S
Sbjct: 554 KSTVQGILRVVQAGRTAKS 572


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = -3

Query: 345 TPARIPSNTASGDXWKWMLSLGWLVYGIGDL 253
           TP  +PS+   GD     L  G+   G   L
Sbjct: 442 TPTSVPSSNGYGDYMNNCLQSGYFSGGFSSL 472


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 350,126
Number of Sequences: 2352
Number of extensions: 6618
Number of successful extensions: 34
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 27084645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)