Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc6f16
(362 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 23 1.5
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 23 1.5
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 22 2.6
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 22 2.6
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 22 2.6
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 22 2.6
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 2.6
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 2.6
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 2.6
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 2.6
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 2.6
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 2.6
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 22 2.6
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 2.6
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 2.6
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 2.6
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 2.6
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 21 3.4
AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8 ... 21 4.5
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 5.9
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 5.9
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 5.9
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 21 5.9
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 21 5.9
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 21 5.9
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 21 5.9
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 21 5.9
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 21 5.9
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 21 5.9
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 21 5.9
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 21 5.9
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 5.9
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 5.9
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 20 7.8
DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 20 7.8
AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength rhodo... 20 7.8
AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength rhodo... 20 7.8
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 20 7.8
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 22.6 bits (46), Expect = 1.5
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +2
Query: 164 PSSSRITIGGLALMHQATLPCDLGYINPIIKSPIP 268
PS++R +G +A + PC + P+ P+P
Sbjct: 450 PSATRYDLGAVATVGTTVAPC---FEEPLPSLPLP 481
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 22.6 bits (46), Expect = 1.5
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 193 SRPYASSHPPLRSRLHQPDH 252
S+ YA+S LRSR H H
Sbjct: 207 SKKYATSSNSLRSRTHDFQH 226
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.8 bits (44), Expect = 2.6
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 193 SRPYASSHPPLRSRLHQPDH 252
S+ YA+S LRSR H H
Sbjct: 196 SKKYATSSNSLRSRTHGFQH 215
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 2.6
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 193 SRPYASSHPPLRSRLHQPDH 252
S+ YA+S LRSR H H
Sbjct: 196 SKKYATSSNSLRSRTHGFQH 215
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.8 bits (44), Expect = 2.6
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 193 SRPYASSHPPLRSRLHQPDH 252
S+ YA+S LRSR H H
Sbjct: 207 SKKYATSSNSLRSRTHGFQH 226
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 2.6
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 193 SRPYASSHPPLRSRLHQPDH 252
S+ YA+S LRSR H H
Sbjct: 207 SKKYATSSNSLRSRTHGFQH 226
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 2.6
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 193 SRPYASSHPPLRSRLHQPDH 252
S+ YA+S LRSR H H
Sbjct: 207 SKKYATSSNSLRSRTHGFQH 226
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 2.6
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 193 SRPYASSHPPLRSRLHQPDH 252
S+ YA+S LRSR H H
Sbjct: 207 SKKYATSSNSLRSRTHGFQH 226
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 2.6
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 193 SRPYASSHPPLRSRLHQPDH 252
S+ YA+S LRSR H H
Sbjct: 207 SKKYATSSNSLRSRTHGFQH 226
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 2.6
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 193 SRPYASSHPPLRSRLHQPDH 252
S+ YA+S LRSR H H
Sbjct: 207 SKKYATSSNSLRSRTHGFQH 226
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 2.6
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 193 SRPYASSHPPLRSRLHQPDH 252
S+ YA+S LRSR H H
Sbjct: 196 SKKYATSSNSLRSRTHGFQH 215
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.8 bits (44), Expect = 2.6
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 193 SRPYASSHPPLRSRLHQPDH 252
S+ YA+S LRSR H H
Sbjct: 207 SKKYATSSNSLRSRTHGFQH 226
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.8 bits (44), Expect = 2.6
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 193 SRPYASSHPPLRSRLHQPDH 252
S+ YA+S LRSR H H
Sbjct: 207 SKKYATSSNSLRSRTHGFQH 226
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 2.6
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 193 SRPYASSHPPLRSRLHQPDH 252
S+ YA+S LRSR H H
Sbjct: 207 SKKYATSSNSLRSRTHGFQH 226
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 2.6
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 193 SRPYASSHPPLRSRLHQPDH 252
S+ YA+S LRSR H H
Sbjct: 207 SKKYATSSNSLRSRTHGFQH 226
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 2.6
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 193 SRPYASSHPPLRSRLHQPDH 252
S+ YA+S LRSR H H
Sbjct: 207 SKKYATSSNSLRSRTHGFQH 226
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.8 bits (44), Expect = 2.6
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 193 SRPYASSHPPLRSRLHQPDH 252
S+ YA+S LRSR H H
Sbjct: 207 SKKYATSSNSLRSRTHGFQH 226
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.4 bits (43), Expect = 3.4
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +1
Query: 193 SRPYASSHPPLRSRLHQPDH 252
S+ YA+S LR+R H H
Sbjct: 207 SKKYATSSNSLRNRTHDFQH 226
>AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8
protein.
Length = 208
Score = 21.0 bits (42), Expect = 4.5
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -3
Query: 222 GRVA*CIRARPPIVMRED 169
GRV CI +RP RED
Sbjct: 169 GRVLACISSRPGQCGRED 186
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 20.6 bits (41), Expect = 5.9
Identities = 10/38 (26%), Positives = 18/38 (47%)
Frame = -3
Query: 183 VMREDEGVASTLPPSTVTSAVVQQRSTVTGILRLGAEG 70
V + DEG P T +A + + T+T +++ G
Sbjct: 217 VWKNDEGTLRKSPSLTSLNAYLIKNQTITCPIKVSWRG 254
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 20.6 bits (41), Expect = 5.9
Identities = 10/38 (26%), Positives = 18/38 (47%)
Frame = -3
Query: 183 VMREDEGVASTLPPSTVTSAVVQQRSTVTGILRLGAEG 70
V + DEG P T +A + + T+T +++ G
Sbjct: 268 VWKNDEGTLRKSPSLTSLNAYLIKNQTITCPIKVSWRG 305
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 20.6 bits (41), Expect = 5.9
Identities = 10/38 (26%), Positives = 18/38 (47%)
Frame = -3
Query: 183 VMREDEGVASTLPPSTVTSAVVQQRSTVTGILRLGAEG 70
V + DEG P T +A + + T+T +++ G
Sbjct: 217 VWKNDEGTLRKSPSLTSLNAYLIKNQTITCPIKVSWRG 254
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 20.6 bits (41), Expect = 5.9
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +1
Query: 193 SRPYASSHPPLRSRLHQPDH 252
S+ YA+S LR+R H H
Sbjct: 196 SKKYATSSNSLRNRTHGFQH 215
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 20.6 bits (41), Expect = 5.9
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +1
Query: 193 SRPYASSHPPLRSRLHQPDH 252
S+ YA+S LR+R H H
Sbjct: 207 SKKYATSSNSLRNRTHGFQH 226
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 20.6 bits (41), Expect = 5.9
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +1
Query: 193 SRPYASSHPPLRSRLHQPDH 252
S+ YA+S LR+R H H
Sbjct: 207 SKKYATSSNSLRNRTHGFQH 226
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 20.6 bits (41), Expect = 5.9
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +1
Query: 193 SRPYASSHPPLRSRLHQPDH 252
S+ YA+S LR+R H H
Sbjct: 196 SKKYATSSNSLRNRTHGFQH 215
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 20.6 bits (41), Expect = 5.9
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +1
Query: 193 SRPYASSHPPLRSRLHQPDH 252
S+ YA+S LR+R H H
Sbjct: 207 SKKYATSSNSLRNRTHGFQH 226
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 20.6 bits (41), Expect = 5.9
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +1
Query: 193 SRPYASSHPPLRSRLHQPDH 252
S+ YA+S LR+R H H
Sbjct: 196 SKKYATSSNSLRNRTHGFQH 215
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 20.6 bits (41), Expect = 5.9
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +1
Query: 193 SRPYASSHPPLRSRLHQPDH 252
S+ YA+S LR+R H H
Sbjct: 212 SKKYATSSNSLRNRTHGFQH 231
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 20.6 bits (41), Expect = 5.9
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +1
Query: 193 SRPYASSHPPLRSRLHQPDH 252
S+ YA+S LR+R H H
Sbjct: 207 SKKYATSSNSLRNRTHGFQH 226
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 20.6 bits (41), Expect = 5.9
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +1
Query: 193 SRPYASSHPPLRSRLHQPDH 252
S+ YA+S LR+R H H
Sbjct: 207 SKKYATSSNSLRNRTHGFQH 226
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 20.6 bits (41), Expect = 5.9
Identities = 12/55 (21%), Positives = 23/55 (41%)
Frame = +2
Query: 8 VSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGGNVLATPSS 172
+++++ G R ++ + F +P TV C T DV ++ SS
Sbjct: 1173 LTTVLTGLRKYTNYTIQVLAFTRVGD-GVPTTVTYCQTEEDVPGSPADIKVVVSS 1226
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 20.6 bits (41), Expect = 5.9
Identities = 12/55 (21%), Positives = 23/55 (41%)
Frame = +2
Query: 8 VSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGGNVLATPSS 172
+++++ G R ++ + F +P TV C T DV ++ SS
Sbjct: 1169 LTTVLTGLRKYTNYTIQVLAFTRVGD-GVPTTVTYCQTEEDVPGSPADIKVVVSS 1222
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 20.2 bits (40), Expect = 7.8
Identities = 5/9 (55%), Positives = 7/9 (77%)
Frame = -3
Query: 297 WMLSLGWLV 271
W+ SLGW +
Sbjct: 176 WLFSLGWTI 184
>DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein
protein.
Length = 430
Score = 20.2 bits (40), Expect = 7.8
Identities = 8/37 (21%), Positives = 16/37 (43%)
Frame = +1
Query: 157 GHPFILSHYYWRSRPYASSHPPLRSRLHQPDHQIPDS 267
G +L ++WR+ YA ++ IP++
Sbjct: 30 GQAPLLERFFWRTLDYAYPDEASKTMAMMKGEYIPEN 66
>AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength
rhodopsin protein.
Length = 152
Score = 20.2 bits (40), Expect = 7.8
Identities = 5/9 (55%), Positives = 7/9 (77%)
Frame = -3
Query: 297 WMLSLGWLV 271
W+ SLGW +
Sbjct: 142 WLFSLGWTI 150
>AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength
rhodopsin protein.
Length = 154
Score = 20.2 bits (40), Expect = 7.8
Identities = 5/9 (55%), Positives = 7/9 (77%)
Frame = -3
Query: 297 WMLSLGWLV 271
W+ SLGW +
Sbjct: 52 WLFSLGWTI 60
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 20.2 bits (40), Expect = 7.8
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +2
Query: 206 HQATLPCDLGYINPIIKSP 262
H A + D +++PI KSP
Sbjct: 60 HIADIGADALWLSPIYKSP 78
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,590
Number of Sequences: 438
Number of extensions: 1876
Number of successful extensions: 40
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 8556345
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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