Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6f06
         (655 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    26   0.90 
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    26   1.2  
U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.             25   2.8  
AY146748-1|AAO12063.1|  279|Anopheles gambiae odorant-binding pr...    23   8.4  
AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.           23   8.4  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 26.2 bits (55), Expect = 0.90
 Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
 Frame = -3

Query: 617  CHRSAWPQWCRHGLSCPR*GGHDI--RRMCSSGCR--NVFQRDNSSVVH 483
            C+R  WP W +  L   R  G  +  R   ++G R  +V QR    + H
Sbjct: 1129 CNRGQWPSWMKQNLPTFRPSGPAMGPRTAMAAGTRRAHVLQRSAGKMFH 1177


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 9/25 (36%), Positives = 18/25 (72%)
 Frame = -1

Query: 421 RSFQSGSRVLLVHIDLRAFFSSIPN 347
           RSF++G+++  ++ D  A F S+P+
Sbjct: 601 RSFEAGTQLDAIYTDFHAAFDSLPH 625


>U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.
          Length = 278

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 15/54 (27%), Positives = 25/54 (46%)
 Frame = +2

Query: 311 YGVLSRSPVGLLVWYGGEESSKVNVNKQYPGSRLKTPALPIWITSCSGHYGVLF 472
           YG  S S   + VW G ++ ++  +  +Y G  L+T  L       +G  G +F
Sbjct: 128 YGKNSTSKDTVTVWTGVDDITQYGIIDKYNGRSLQTHWLSEQCNRLNGTDGSIF 181


>AY146748-1|AAO12063.1|  279|Anopheles gambiae odorant-binding
           protein AgamOBP41 protein.
          Length = 279

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 178 DPSCVIACGGITERYYSTSDG 240
           D  C+I C GI+ R+++   G
Sbjct: 68  DTKCLIRCVGISGRFWNDHTG 88


>AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.
          Length = 122

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = +3

Query: 444 VAPDTT--AYYLTQTVNY*GIITLKDVSTSTTTHAADVMSSSTWTREPMTT 590
           VAP TT  A   T TV      T+    T+TTT A    +++T    P+TT
Sbjct: 36  VAPTTTTVAPTTTTTVAPTTTTTVAPGQTTTTTVAPGQTTTTTVASGPVTT 86


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 766,718
Number of Sequences: 2352
Number of extensions: 17491
Number of successful extensions: 62
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 62
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)