Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6f05
         (157 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY334000-1|AAR01125.1|  268|Anopheles gambiae FBN23 protein.           23   1.3  
AY333999-1|AAR01124.1|  268|Anopheles gambiae FBN23 protein.           23   1.3  
AY333998-1|AAR01123.1|  268|Anopheles gambiae FBN23 protein.           23   1.3  
AY333997-1|AAR01122.1|  268|Anopheles gambiae FBN23 protein.           23   1.3  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    22   2.2  
AY146746-1|AAO12061.1|  333|Anopheles gambiae odorant-binding pr...    21   3.9  
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    21   3.9  
DQ139954-1|ABA29475.1|  451|Anopheles gambiae protein O-fucosylt...    21   5.2  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          20   9.0  
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          20   9.0  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           20   9.0  

>AY334000-1|AAR01125.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -3

Query: 122 YLKSIIHSSRERSLQARGDLFICRRL*RPSC 30
           Y+  +IH SRE  L+    L + R +   SC
Sbjct: 110 YMPQVIHVSREDQLKDSSGLAVSRAVLVRSC 140


>AY333999-1|AAR01124.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -3

Query: 122 YLKSIIHSSRERSLQARGDLFICRRL*RPSC 30
           Y+  +IH SRE  L+    L + R +   SC
Sbjct: 110 YMPQVIHVSREDQLKDSSGLTVSRAVLVRSC 140


>AY333998-1|AAR01123.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -3

Query: 122 YLKSIIHSSRERSLQARGDLFICRRL*RPSC 30
           Y+  +IH SRE  L+    L + R +   SC
Sbjct: 110 YMPQVIHVSREDQLKDSSGLAVSRAVLVRSC 140


>AY333997-1|AAR01122.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -3

Query: 122 YLKSIIHSSRERSLQARGDLFICRRL*RPSC 30
           Y+  +IH SRE  L+    L + R +   SC
Sbjct: 110 YMPQVIHVSREDQLKDSSGLAVSRAVLVRSC 140


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = -1

Query: 94  ASVPYRLEGTYLFVVVFEDHRAVTL 20
           +S+  +L  T + V+ F DH+A+T+
Sbjct: 207 SSLETQLRTTDMHVLSFSDHKALTV 231


>AY146746-1|AAO12061.1|  333|Anopheles gambiae odorant-binding
           protein AgamOBP43 protein.
          Length = 333

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 3   TVTTAGSVTARWSSKTTTNK*VP 71
           ++TTA +  A  ++ TTT K  P
Sbjct: 274 SLTTAAATAAAMTTTTTTKKSTP 296


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -1

Query: 97  VASVPYRLEGTYLFVVVFEDHRAVTLPAV 11
           V  V  RLE   + +   +DHRA+ L +V
Sbjct: 261 VKGVCTRLEDLRMVLNQTQDHRAIVLASV 289


>DQ139954-1|ABA29475.1|  451|Anopheles gambiae protein
           O-fucosyltransferase 2 protein.
          Length = 451

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = -3

Query: 146 SSDTVSRFYLKSIIHSSRERSLQARGDLFICRRL*R 39
           SSD   R    +     R R  +ARG  ++C  L R
Sbjct: 277 SSDRADRTVRPARWTDERSRPRKARGGEYLCAHLRR 312


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 25  SQHDGLQRRRQINKSPLACK 84
           SQ+DGL R  + +   L C+
Sbjct: 64  SQNDGLDRETETDLRILGCE 83


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 25  SQHDGLQRRRQINKSPLACK 84
           SQ+DGL R  + +   L C+
Sbjct: 64  SQNDGLDRETETDLRILGCE 83


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 141 RHCVKILFKIHHTQQS 94
           R C+  L  +H T+QS
Sbjct: 564 RFCLGALSNVHRTEQS 579


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,878
Number of Sequences: 2352
Number of extensions: 2369
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 31
effective length of database: 491,067
effective search space used:  9821340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)