Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6f05
         (157 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X63237-1|CAA44911.1|  156|Homo sapiens ubiquitin protein.              30   1.2  
S79522-1|AAB21188.1|  156|Homo sapiens ubiquitin carboxyl extens...    30   1.2  
M10939-1|AAA36788.1|  152|Homo sapiens protein ( Human ubiquitin...    30   1.2  
BC066293-1|AAH66293.1|  156|Homo sapiens ribosomal protein S27a ...    30   1.2  
BC053371-1|AAH53371.1|  156|Homo sapiens ribosomal protein S27a ...    30   1.2  
BC001392-1|AAH01392.1|  156|Homo sapiens ribosomal protein S27a ...    30   1.2  
AB061854-1|BAB79488.1|  121|Homo sapiens ribosomal protein S27A ...    30   1.2  
X14329-1|CAA32507.1|  458|Homo sapiens protein ( Human mRNA for ...    28   4.8  
BC027897-1|AAH27897.1|  458|Homo sapiens carboxypeptidase N, pol...    28   4.8  
AL441886-3|CAI13078.1|  458|Homo sapiens carboxypeptidase N, pol...    28   4.8  

>X63237-1|CAA44911.1|  156|Homo sapiens ubiquitin protein.
          Length = 156

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 13/20 (65%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
 Frame = +2

Query: 2   DRHYCGKCHSTMVF-KDDDK 58
           DRHYCGKC  T  F K +DK
Sbjct: 137 DRHYCGKCCLTYCFNKPEDK 156


>S79522-1|AAB21188.1|  156|Homo sapiens ubiquitin carboxyl extension
           protein protein.
          Length = 156

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 13/20 (65%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
 Frame = +2

Query: 2   DRHYCGKCHSTMVF-KDDDK 58
           DRHYCGKC  T  F K +DK
Sbjct: 137 DRHYCGKCCLTYCFNKPEDK 156


>M10939-1|AAA36788.1|  152|Homo sapiens protein ( Human ubiquitin
           mRNA, 3' end. ).
          Length = 152

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 13/20 (65%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
 Frame = +2

Query: 2   DRHYCGKCHSTMVF-KDDDK 58
           DRHYCGKC  T  F K +DK
Sbjct: 133 DRHYCGKCCLTYCFNKPEDK 152


>BC066293-1|AAH66293.1|  156|Homo sapiens ribosomal protein S27a
           protein.
          Length = 156

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 13/20 (65%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
 Frame = +2

Query: 2   DRHYCGKCHSTMVF-KDDDK 58
           DRHYCGKC  T  F K +DK
Sbjct: 137 DRHYCGKCCLTYCFNKPEDK 156


>BC053371-1|AAH53371.1|  156|Homo sapiens ribosomal protein S27a
           protein.
          Length = 156

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 13/20 (65%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
 Frame = +2

Query: 2   DRHYCGKCHSTMVF-KDDDK 58
           DRHYCGKC  T  F K +DK
Sbjct: 137 DRHYCGKCCLTYCFNKPEDK 156


>BC001392-1|AAH01392.1|  156|Homo sapiens ribosomal protein S27a
           protein.
          Length = 156

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 13/20 (65%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
 Frame = +2

Query: 2   DRHYCGKCHSTMVF-KDDDK 58
           DRHYCGKC  T  F K +DK
Sbjct: 137 DRHYCGKCCLTYCFNKPEDK 156


>AB061854-1|BAB79488.1|  121|Homo sapiens ribosomal protein S27A
           protein.
          Length = 121

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 13/20 (65%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
 Frame = +2

Query: 2   DRHYCGKCHSTMVF-KDDDK 58
           DRHYCGKC  T  F K +DK
Sbjct: 102 DRHYCGKCCLTYCFNKPEDK 121


>X14329-1|CAA32507.1|  458|Homo sapiens protein ( Human mRNA for
           carboxypeptidase N small subunit (EC 3.4.17.3). ).
          Length = 458

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -1

Query: 112 PSYTAVASVPYRLEGTYLFVVVFEDHRAVTLP 17
           P  T V S+   +EG +L+V+ F DH  +  P
Sbjct: 43  PGITRVYSIGRSVEGRHLYVLEFSDHPGIHEP 74


>BC027897-1|AAH27897.1|  458|Homo sapiens carboxypeptidase N,
           polypeptide 1 protein.
          Length = 458

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -1

Query: 112 PSYTAVASVPYRLEGTYLFVVVFEDHRAVTLP 17
           P  T V S+   +EG +L+V+ F DH  +  P
Sbjct: 43  PGITRVYSIGRSVEGRHLYVLEFSDHPGIHEP 74


>AL441886-3|CAI13078.1|  458|Homo sapiens carboxypeptidase N,
           polypeptide 1 protein.
          Length = 458

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -1

Query: 112 PSYTAVASVPYRLEGTYLFVVVFEDHRAVTLP 17
           P  T V S+   +EG +L+V+ F DH  +  P
Sbjct: 43  PGITRVYSIGRSVEGRHLYVLEFSDHPGIHEP 74


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,144,741
Number of Sequences: 237096
Number of extensions: 308195
Number of successful extensions: 661
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 661
length of database: 76,859,062
effective HSP length: 31
effective length of database: 69,509,086
effective search space used: 1390181720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)