Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6e24
         (701 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   2.4  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   4.2  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   4.2  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    22   5.6  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   9.7  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   9.7  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +3

Query: 444 ETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPEFVDMS 560
           +TLG   N I EP+ +     T K ++  A AP   D++
Sbjct: 380 QTLGGSSNEIVEPVPQPVEEVTQKPSSTKAPAPPSRDLT 418


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 14/53 (26%), Positives = 27/53 (50%)
 Frame = -2

Query: 412 ESSTGCPRTKPSVPSMAMVRTVFSPKCWATSSTRRGDRFCTSRAFRIGGRLSS 254
           E++T CP  K +V     V++  +   W T+ +   D   T+   +IG ++S+
Sbjct: 122 ENTTNCPEQKNTVTVTFTVQSDDTTLNWGTNESYNLD--LTTTGNQIGVQISA 172


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +2

Query: 29  PIFQTEQLISENVGGNKSSWKRHF 100
           P +QT+ L+S + GG   S+   F
Sbjct: 188 PTYQTQGLLSPSYGGTTYSFTADF 211


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +1

Query: 592 KSSICSLLMPKEERLGCLAELVWAKL 669
           + S+ +LL    E + C++E VW+KL
Sbjct: 97  QQSVTALLDTGSE-VSCISEEVWSKL 121


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 2/37 (5%)
 Frame = +2

Query: 563 AAGDSRNWYKSRRSARSLCQRR--KDWVVWRSWCGQN 667
           +AGD  + Y    S     + R  +   +W  WC QN
Sbjct: 542 SAGDDYDIYTRLVSFSDRLKSRGIRTAAIWPLWCSQN 578


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +3

Query: 12  IYFAASPFSRLSS*FLKMLGAISRVGSGILAVKSVAE 122
           +YF    FSRL+     +L  +SR    +   K+V++
Sbjct: 459 LYFQLCEFSRLNFSVEHLLMELSRAIDSVACSKTVSD 495


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,067
Number of Sequences: 336
Number of extensions: 3723
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)