Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc6e19
(443 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 24 0.74
U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic pr... 21 4.0
L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protei... 21 4.0
DQ659251-1|ABG47449.1| 366|Tribolium castaneum chitinase 11 pro... 21 4.0
AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory recept... 21 5.2
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.9
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.9
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.9
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.9
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.9
DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein. 21 6.9
AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory recept... 20 9.2
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 23.8 bits (49), Expect = 0.74
Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = -3
Query: 366 KIKLICCEXCDFLGSAKIQSAPPLVLCLRVE--LSDVECPY 250
KIK C+ CDF+ K++ + +R + L+ +CP+
Sbjct: 198 KIKTFKCKQCDFVAITKLEQWNHSKVHIREDKRLTCPKCPF 238
Score = 21.4 bits (43), Expect = 4.0
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +1
Query: 10 RLSCRETNILSYHARTLKLH 69
R SCR+ + + + +LK+H
Sbjct: 286 RYSCRDCSYATKYCHSLKIH 305
>U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic
protein protein.
Length = 372
Score = 21.4 bits (43), Expect = 4.0
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -3
Query: 249 KLQNVQNNFE 220
K+ N+QNNFE
Sbjct: 57 KIYNIQNNFE 66
>L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protein
protein.
Length = 69
Score = 21.4 bits (43), Expect = 4.0
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +1
Query: 10 RLSCRETNILSYHARTLKLH 69
R SCR+ + + + +LK+H
Sbjct: 44 RYSCRDCSYATKYCHSLKIH 63
>DQ659251-1|ABG47449.1| 366|Tribolium castaneum chitinase 11
protein.
Length = 366
Score = 21.4 bits (43), Expect = 4.0
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 248 LYGHSTSDSSTLKHNTSGGA 307
LYG+S S S+++ SGGA
Sbjct: 218 LYGNSMSVDSSVQSWLSGGA 237
>AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory receptor
candidate 61 protein.
Length = 670
Score = 21.0 bits (42), Expect = 5.2
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +2
Query: 218 ISKLFWTFWSL 250
IS L W FWSL
Sbjct: 565 ISTLGWFFWSL 575
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 20.6 bits (41), Expect = 6.9
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +1
Query: 34 ILSYHARTLKLHQ 72
+L+YH RT +H+
Sbjct: 295 VLNYHHRTADIHE 307
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 20.6 bits (41), Expect = 6.9
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +1
Query: 34 ILSYHARTLKLHQ 72
+L+YH RT +H+
Sbjct: 295 VLNYHHRTADIHE 307
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 20.6 bits (41), Expect = 6.9
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +1
Query: 34 ILSYHARTLKLHQ 72
+L+YH RT +H+
Sbjct: 295 VLNYHHRTADIHE 307
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 20.6 bits (41), Expect = 6.9
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +1
Query: 34 ILSYHARTLKLHQ 72
+L+YH RT +H+
Sbjct: 295 VLNYHHRTADIHE 307
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 20.6 bits (41), Expect = 6.9
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +1
Query: 34 ILSYHARTLKLHQ 72
+L+YH RT +H+
Sbjct: 295 VLNYHHRTADIHE 307
>DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein.
Length = 414
Score = 20.6 bits (41), Expect = 6.9
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +2
Query: 254 GHSTSDSSTLKHN 292
GHSTS + L HN
Sbjct: 329 GHSTSPNLPLTHN 341
>AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory receptor
candidate 51 protein.
Length = 771
Score = 20.2 bits (40), Expect = 9.2
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 95 NQDKQILRCNYIFIFFFLKNLI 160
N D +I CN IF+ L +L+
Sbjct: 663 NFDIEIALCNGIFLLLTLGSLL 684
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,041
Number of Sequences: 336
Number of extensions: 1956
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 9985735
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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