Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6e09
         (610 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    23   2.7  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   3.5  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   4.6  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   4.6  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   6.1  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   6.1  

>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = -1

Query: 181 KYKHIVNVNLKSLRVFEDNN 122
           K KH+VN++   ++V +D+N
Sbjct: 229 KIKHLVNLHKNLVKVAKDHN 248


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -1

Query: 598 INKCVQAGDYYYWPNWPKGQAF 533
           +  CV+  + Y W N P G  F
Sbjct: 512 LQTCVRCPNNYPWVNDPTGDGF 533


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 7/19 (36%), Positives = 15/19 (78%)
 Frame = +3

Query: 453 LLCMIGIVGSMTIPNFIFK 509
           ++C+ G++G++ +P  IFK
Sbjct: 78  IMCL-GVIGNVMVPIVIFK 95


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 7/19 (36%), Positives = 15/19 (78%)
 Frame = +3

Query: 453 LLCMIGIVGSMTIPNFIFK 509
           ++C+ G++G++ +P  IFK
Sbjct: 78  IMCL-GVIGNVMVPIVIFK 95


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 6/17 (35%), Positives = 14/17 (82%)
 Frame = -1

Query: 433 LFVFDPKYFLNVELSLR 383
           ++VF+P+Y+L  +++ R
Sbjct: 231 IYVFNPRYYLEKKVTRR 247


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 6/17 (35%), Positives = 14/17 (82%)
 Frame = -1

Query: 433 LFVFDPKYFLNVELSLR 383
           ++VF+P+Y+L  +++ R
Sbjct: 231 IYVFNPRYYLEKKVTRR 247


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,079
Number of Sequences: 336
Number of extensions: 3592
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)