Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6e02
         (744 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    25   0.84 
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    24   1.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.5  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 8/48 (16%)
 Frame = +3

Query: 387 ISIHGRESNNL--ARILQTYYET------SHHPSLIWACVPMLCSRTY 506
           I ++ ++++NL  +++L TY +       SH P   W C+   C R +
Sbjct: 22  IYLYWQQTSNLTTSKLLYTYRQPYPRQKKSHPPQWTWQCINQRCERRH 69


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +3

Query: 417 LARILQTYYETSHHPSLIWACVPMLCSR 500
           L  ++ T YE  +H +++W+C    C R
Sbjct: 241 LTYLIWTIYEM-YHLAILWSCTSTNCPR 267


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/17 (47%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
 Frame = -2

Query: 89  YVFITTRYFLLC-HFFY 42
           Y F+   +FLLC ++FY
Sbjct: 134 YYFVVPLFFLLCIYYFY 150


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,005
Number of Sequences: 336
Number of extensions: 4550
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)