Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6e02
         (744 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U10402-3|AAK95874.1|  734|Caenorhabditis elegans Hypothetical pr...    68   6e-12
Z66495-11|CAK12849.1|  502|Caenorhabditis elegans Hypothetical p...    29   4.6  
Z66495-2|CAA91267.2|  502|Caenorhabditis elegans Hypothetical pr...    29   4.6  
Z66495-1|CAA91268.2|  502|Caenorhabditis elegans Hypothetical pr...    29   4.6  
Z11505-2|CAA77585.1|  418|Caenorhabditis elegans Hypothetical pr...    28   6.1  
Z80214-5|CAJ76929.1|  916|Caenorhabditis elegans Hypothetical pr...    28   8.0  
Z80214-4|CAB02263.1|  982|Caenorhabditis elegans Hypothetical pr...    28   8.0  

>U10402-3|AAK95874.1|  734|Caenorhabditis elegans Hypothetical
           protein C34E10.5 protein.
          Length = 734

 Score = 68.1 bits (159), Expect = 6e-12
 Identities = 55/215 (25%), Positives = 96/215 (44%), Gaps = 9/215 (4%)
 Frame = +3

Query: 108 TCLTEALQCSYSFIVSPI--IHPRFRRQSTNAGKNGG-FTRSDMVLSPQDWTSRIVAKLS 278
           T  T   +  Y+F+V PI  +   F   + +A  +       D+ L    W S +V K+S
Sbjct: 69  TFCTRLGEFKYNFVVYPIGGVVRAFWTPNGSAENHPPVIDLPDVQLRNDLWESYVVGKIS 128

Query: 279 PYINVDSPSATVRQRHEDYLNEELSYCRGLGVPAIMISIHGRESNNLARILQTYYETSHH 458
           P+I+ DS         E++L +ELSY   LG+  + I +    S   A IL+ +  T + 
Sbjct: 129 PWIDCDSSDPAFASLSEEHLLKELSYICYLGLQTMAIELTRISSPRTAAILKKWIWTRNS 188

Query: 459 PSLIWACVPMLCSRTYRECTEDDEEEKAWNEPWYWWSKFHERLDWDKRV--GVVLELSAD 632
              +W  +P        +C + D       + W  W+ F +       V   V L +S++
Sbjct: 189 RFTVWVQLP----SAIEKCKDYDAFTIEHVDLWTIWADFRKNCGNFSGVYFQVALTISSE 244

Query: 633 LPSQ----EVVKRWLGEPVKAIIVPTSIFHNNKKG 725
           LP +    ++V RW  EP+ A ++ + +F + + G
Sbjct: 245 LPDELTELKLVDRWKAEPLAAFVIESGLFISGRNG 279


>Z66495-11|CAK12849.1|  502|Caenorhabditis elegans Hypothetical
           protein C36A4.3 protein.
          Length = 502

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 16/58 (27%), Positives = 24/58 (41%)
 Frame = +3

Query: 45  KKMAQQEISCGYEYIITADLQTCLTEALQCSYSFIVSPIIHPRFRRQSTNAGKNGGFT 218
           K M +QE+       + A  +T  T    CSY     P +  +   +   A +NGG T
Sbjct: 294 KPMTKQEVIENCFAFLLAGYETTSTAMTYCSYLLSKYPNVQQKLYEEIMEAKENGGLT 351


>Z66495-2|CAA91267.2|  502|Caenorhabditis elegans Hypothetical
           protein C36A4.2 protein.
          Length = 502

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 16/58 (27%), Positives = 24/58 (41%)
 Frame = +3

Query: 45  KKMAQQEISCGYEYIITADLQTCLTEALQCSYSFIVSPIIHPRFRRQSTNAGKNGGFT 218
           K M +QE+       + A  +T  T    CSY     P +  +   +   A +NGG T
Sbjct: 294 KPMTKQEVIENCFAFLLAGYETTSTAMTYCSYLLSKYPNVQQKLYEEIMEAKENGGLT 351


>Z66495-1|CAA91268.2|  502|Caenorhabditis elegans Hypothetical
           protein C36A4.1 protein.
          Length = 502

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 16/58 (27%), Positives = 24/58 (41%)
 Frame = +3

Query: 45  KKMAQQEISCGYEYIITADLQTCLTEALQCSYSFIVSPIIHPRFRRQSTNAGKNGGFT 218
           K M +QE+       + A  +T  T    CSY     P +  +   +   A +NGG T
Sbjct: 294 KPMTKQEVIENCFAFLLAGYETTSTAMTYCSYLLSKYPNVQQKLYEEIMEAKENGGLT 351


>Z11505-2|CAA77585.1|  418|Caenorhabditis elegans Hypothetical
           protein F59B2.3 protein.
          Length = 418

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +1

Query: 541 LGMSPGTGGPNSMSALIGINVLVLFWSCLQIFHHR 645
           +G S    GP  M+ L G  ++   ++ +Q +HHR
Sbjct: 221 VGHSSAKLGPGEMAVLSGAKMITHLFNAMQSYHHR 255


>Z80214-5|CAJ76929.1|  916|Caenorhabditis elegans Hypothetical
           protein C27D8.3b protein.
          Length = 916

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +3

Query: 402 RESNNLARILQTYYETSHHPSLI 470
           R +NNL +  Q ++++ HHPSLI
Sbjct: 844 RPNNNLNQQQQHHHQSHHHPSLI 866


>Z80214-4|CAB02263.1|  982|Caenorhabditis elegans Hypothetical
           protein C27D8.3a protein.
          Length = 982

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +3

Query: 402 RESNNLARILQTYYETSHHPSLI 470
           R +NNL +  Q ++++ HHPSLI
Sbjct: 910 RPNNNLNQQQQHHHQSHHHPSLI 932


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,298,741
Number of Sequences: 27780
Number of extensions: 405782
Number of successful extensions: 1125
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1089
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1124
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)