Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6d20
         (471 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069208-1|AAL39353.1|  374|Drosophila melanogaster GH26152p pro...    31   1.0  
AE014296-2342|AAF49773.3| 3146|Drosophila melanogaster CG9007-PA...    31   1.0  
AY089475-1|AAL90213.1|  180|Drosophila melanogaster AT28768p pro...    27   9.7  
AE014298-1649|AAF48066.1|  180|Drosophila melanogaster CG2533-PA...    27   9.7  

>AY069208-1|AAL39353.1|  374|Drosophila melanogaster GH26152p
           protein.
          Length = 374

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 19/56 (33%), Positives = 28/56 (50%)
 Frame = +2

Query: 8   TARQSALSLLQDAQATVKFNSAPVEGHFYAATTLLYAERNLFKIGQTTNLTRRLVS 175
           T   +  S+L  AQ    F+  P  GHF AA TLL  E+   K+ + +   +R +S
Sbjct: 290 TTLSTVNSILSTAQKLHMFDDKPKGGHFNAAPTLL--EQQQEKMSERSRCLQRTIS 343


>AE014296-2342|AAF49773.3| 3146|Drosophila melanogaster CG9007-PA
            protein.
          Length = 3146

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 19/56 (33%), Positives = 28/56 (50%)
 Frame = +2

Query: 8    TARQSALSLLQDAQATVKFNSAPVEGHFYAATTLLYAERNLFKIGQTTNLTRRLVS 175
            T   +  S+L  AQ    F+  P  GHF AA TLL  E+   K+ + +   +R +S
Sbjct: 3062 TTLSTVNSILSTAQKLHMFDDKPKGGHFNAAPTLL--EQQQEKMSERSRCLQRTIS 3115


>AY089475-1|AAL90213.1|  180|Drosophila melanogaster AT28768p
           protein.
          Length = 180

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = -3

Query: 442 FIKLNLFTTTRDDXTKARNKLNGLVLRAVGQARLER 335
           F  L+L TTT DD  +AR K   + +      RLER
Sbjct: 52  FAALSLCTTTSDDQVRARAKRELMAMERRQLQRLER 87


>AE014298-1649|AAF48066.1|  180|Drosophila melanogaster CG2533-PA
           protein.
          Length = 180

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = -3

Query: 442 FIKLNLFTTTRDDXTKARNKLNGLVLRAVGQARLER 335
           F  L+L TTT DD  +AR K   + +      RLER
Sbjct: 52  FAALSLCTTTSDDQVRARAKRELMAMERRQLQRLER 87


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,035,385
Number of Sequences: 53049
Number of extensions: 341706
Number of successful extensions: 855
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 844
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 855
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1601407269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)