Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6d19
         (556 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock p...    58   2e-10
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    23   6.7  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    23   6.7  

>AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock
           protein protein.
          Length = 133

 Score = 58.0 bits (134), Expect = 2e-10
 Identities = 27/68 (39%), Positives = 38/68 (55%)
 Frame = +2

Query: 347 IFVQGSQEAKEDDHDVFASQFFHTYSLPVNSSAADVTAELTSDGYLVVTAPISEXVDKTK 526
           + V+G  E K+DDH   +  F   Y LP   + AD+ + L+SDG L +T P  E   + K
Sbjct: 38  VLVEGKHEEKQDDHGYVSRHFVRRYMLPKGHNEADIVSSLSSDGILTITCPRKEI--EQK 95

Query: 527 NTERVVPI 550
           N ER +PI
Sbjct: 96  NEERSIPI 103


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 23.0 bits (47), Expect = 6.7
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = +3

Query: 78   SLSPVSQR*RLCLPGTKKLSRSPSPLQMTSSRSHG*TF 191
            SLSP +   R   PG + L  +P  +   S R    TF
Sbjct: 1348 SLSPSATHSRFSTPGARSLPLTPPSVPYASDRPPVATF 1385


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 23.0 bits (47), Expect = 6.7
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = +3

Query: 78   SLSPVSQR*RLCLPGTKKLSRSPSPLQMTSSRSHG*TF 191
            SLSP +   R   PG + L  +P  +   S R    TF
Sbjct: 1345 SLSPSATHSRFSTPGARSLPLTPPSVPYASDRPPVATF 1382


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 516,123
Number of Sequences: 2352
Number of extensions: 8235
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51722361
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)