Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6d13
         (121 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    19   6.2  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    19   6.2  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    18   8.1  

>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 18.6 bits (36), Expect = 6.2
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -1

Query: 121 FFFXNCIAFIADTKQRYLHI 62
           FFF  C  FIA      +H+
Sbjct: 76  FFFAICCDFIALIVVNIVHV 95


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 18.6 bits (36), Expect = 6.2
 Identities = 5/13 (38%), Positives = 9/13 (69%)
 Frame = -1

Query: 70  LHIIANCFNLNLI 32
           LH++  C++L  I
Sbjct: 111 LHVVKQCYHLQKI 123


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 18.2 bits (35), Expect = 8.1
 Identities = 8/24 (33%), Positives = 10/24 (41%)
 Frame = +3

Query: 39  FKLKQFAIMCKYRCLVSAIKAIQF 110
           FK+ Q    C   CL+  I    F
Sbjct: 210 FKIIQVVPYCYINCLIYLIGGFWF 233


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,174
Number of Sequences: 336
Number of extensions: 214
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 20
effective length of database: 115,865
effective search space used:  2201435
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)