Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6d13
         (121 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-2968|AAF57505.1|  511|Drosophila melanogaster CG11044-P...    29   0.68 
AY094879-1|AAM11232.1|  310|Drosophila melanogaster RE49158p pro...    28   2.1  

>AE013599-2968|AAF57505.1|  511|Drosophila melanogaster CG11044-PA
           protein.
          Length = 511

 Score = 29.5 bits (63), Expect = 0.68
 Identities = 9/19 (47%), Positives = 16/19 (84%)
 Frame = -1

Query: 103 IAFIADTKQRYLHIIANCF 47
           ++ +ADTK R+LH++ NC+
Sbjct: 288 LSLLADTKLRHLHLLQNCY 306


>AY094879-1|AAM11232.1|  310|Drosophila melanogaster RE49158p
           protein.
          Length = 310

 Score = 27.9 bits (59), Expect = 2.1
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = -1

Query: 103 IAFIADTKQRYLHIIANCF 47
           ++ +ADTK R LH++ NC+
Sbjct: 288 LSLLADTKLRNLHLLQNCY 306


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,024,202
Number of Sequences: 53049
Number of extensions: 33759
Number of successful extensions: 44
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 24,988,368
effective HSP length: 20
effective length of database: 23,927,388
effective search space used: 454620372
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)