Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc6d11
(663 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292334-1|CAL23146.2| 390|Tribolium castaneum gustatory recept... 25 0.73
AM292333-1|CAL23145.2| 316|Tribolium castaneum gustatory recept... 25 0.73
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 24 1.3
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 24 1.3
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 24 1.3
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 24 1.3
AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxida... 22 5.2
AY884063-1|AAX84204.1| 682|Tribolium castaneum pro-phenol oxida... 22 5.2
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 22 5.2
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 22 5.2
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 22 5.2
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 22 5.2
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 22 5.2
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 22 5.2
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 22 5.2
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 22 5.2
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 22 5.2
AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription fa... 21 6.8
>AM292334-1|CAL23146.2| 390|Tribolium castaneum gustatory receptor
candidate 13 protein.
Length = 390
Score = 24.6 bits (51), Expect = 0.73
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -3
Query: 181 AYNSAFIYSFLLLALCSSVLI 119
A+N F +SFLL L SS+L+
Sbjct: 273 AFNDIFGWSFLLFTLYSSLLL 293
>AM292333-1|CAL23145.2| 316|Tribolium castaneum gustatory receptor
candidate 12 protein.
Length = 316
Score = 24.6 bits (51), Expect = 0.73
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -3
Query: 181 AYNSAFIYSFLLLALCSSVLI 119
A+N F +SFLL L SS+L+
Sbjct: 199 AFNDIFGWSFLLFTLYSSLLL 219
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 23.8 bits (49), Expect = 1.3
Identities = 13/53 (24%), Positives = 22/53 (41%)
Frame = +1
Query: 253 RNKVEASITVS*KLLSYVCIVTGISTLN*STVKFTHCRLVTFAFQASIWTIFY 411
+ +E + +S + Y ++ G + L T+ AFQ WT FY
Sbjct: 896 KRTIEINDNISMPYIGYQILLMGGTILGPGTIFLMLVGAFVAAFQIDNWTSFY 948
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 23.8 bits (49), Expect = 1.3
Identities = 13/53 (24%), Positives = 22/53 (41%)
Frame = +1
Query: 253 RNKVEASITVS*KLLSYVCIVTGISTLN*STVKFTHCRLVTFAFQASIWTIFY 411
+ +E + +S + Y ++ G + L T+ AFQ WT FY
Sbjct: 896 KRTIEINDNISMPYIGYQILLMGGTILGPGTIFLMLVGAFVAAFQIDNWTSFY 948
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 23.8 bits (49), Expect = 1.3
Identities = 13/53 (24%), Positives = 22/53 (41%)
Frame = +1
Query: 253 RNKVEASITVS*KLLSYVCIVTGISTLN*STVKFTHCRLVTFAFQASIWTIFY 411
+ +E + +S + Y ++ G + L T+ AFQ WT FY
Sbjct: 896 KRTIEINDNISMPYIGYQILLMGGTILGPGTIFLMLVGAFVAAFQIDNWTSFY 948
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 23.8 bits (49), Expect = 1.3
Identities = 13/53 (24%), Positives = 22/53 (41%)
Frame = +1
Query: 253 RNKVEASITVS*KLLSYVCIVTGISTLN*STVKFTHCRLVTFAFQASIWTIFY 411
+ +E + +S + Y ++ G + L T+ AFQ WT FY
Sbjct: 896 KRTIEINDNISMPYIGYQILLMGGTILGPGTIFLMLVGAFVAAFQIDNWTSFY 948
>AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxidase
subunit 2 protein.
Length = 683
Score = 21.8 bits (44), Expect = 5.2
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +1
Query: 490 ENGMPHPNRSYLGDVSTT*HL 552
E+ + PNR+Y GD+ H+
Sbjct: 348 ESSILSPNRTYYGDLHNMGHV 368
>AY884063-1|AAX84204.1| 682|Tribolium castaneum pro-phenol oxidase
subunit 1 protein.
Length = 682
Score = 21.8 bits (44), Expect = 5.2
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 484 IKENGMPHPNRSYLGDVSTT*HL 552
I E+ + PNR+Y GD H+
Sbjct: 346 IIESSILSPNRNYYGDFHNMGHI 368
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.8 bits (44), Expect = 5.2
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1
Query: 180 RTTPPLYTPSFS 145
R+TPPL TPS S
Sbjct: 124 RSTPPLSTPSNS 135
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.8 bits (44), Expect = 5.2
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1
Query: 180 RTTPPLYTPSFS 145
R+TPPL TPS S
Sbjct: 124 RSTPPLSTPSNS 135
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 21.8 bits (44), Expect = 5.2
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1
Query: 180 RTTPPLYTPSFS 145
R+TPPL TPS S
Sbjct: 124 RSTPPLSTPSNS 135
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.8 bits (44), Expect = 5.2
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1
Query: 180 RTTPPLYTPSFS 145
R+TPPL TPS S
Sbjct: 124 RSTPPLSTPSNS 135
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 21.8 bits (44), Expect = 5.2
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1
Query: 180 RTTPPLYTPSFS 145
R+TPPL TPS S
Sbjct: 124 RSTPPLSTPSNS 135
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 21.8 bits (44), Expect = 5.2
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1
Query: 180 RTTPPLYTPSFS 145
R+TPPL TPS S
Sbjct: 80 RSTPPLSTPSNS 91
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 21.8 bits (44), Expect = 5.2
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1
Query: 180 RTTPPLYTPSFS 145
R+TPPL TPS S
Sbjct: 124 RSTPPLSTPSNS 135
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 21.8 bits (44), Expect = 5.2
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1
Query: 180 RTTPPLYTPSFS 145
R+TPPL TPS S
Sbjct: 124 RSTPPLSTPSNS 135
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 21.8 bits (44), Expect = 5.2
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1
Query: 180 RTTPPLYTPSFS 145
R+TPPL TPS S
Sbjct: 124 RSTPPLSTPSNS 135
>AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription
factor protein.
Length = 441
Score = 21.4 bits (43), Expect = 6.8
Identities = 10/33 (30%), Positives = 15/33 (45%)
Frame = +2
Query: 221 IHHNENIGAHFETRLKPQ*LYHRNCCPTFAS*Q 319
I +N A + + +P +Y R PTF Q
Sbjct: 194 IKYNPFAKAFLDAKERPDSIYQREYSPTFTQQQ 226
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,700
Number of Sequences: 336
Number of extensions: 3259
Number of successful extensions: 18
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -