Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6d11
         (663 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    25   2.1  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          24   4.9  
AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.          23   8.6  
AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.          23   8.6  
AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.          23   8.6  
AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.          23   8.6  

>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +3

Query: 342 YCKVHALSLSHVCLSSVDMDNFLRL*LTMNSMKLQFTLYHI 464
           Y ++ ALSL+H  LS V  +  L + L   S K    LY +
Sbjct: 749 YLRLWALSLAHAELSEVLWNMVLSMGLKQTSYKGAIMLYFV 789


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 212 YHHIHHNENIGAHF 253
           +HH HH++N   HF
Sbjct: 658 HHHHHHHQNPNDHF 671


>AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +2

Query: 206 PFYHHIHHNENIGAHFETR 262
           P Y+ +++NEN+   F++R
Sbjct: 162 PSYNQLNYNENLQRFFDSR 180


>AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +2

Query: 206 PFYHHIHHNENIGAHFETR 262
           P Y+ +++NEN+   F++R
Sbjct: 162 PSYNQLNYNENLQRFFDSR 180


>AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +2

Query: 206 PFYHHIHHNENIGAHFETR 262
           P Y+ +++NEN+   F++R
Sbjct: 162 PSYNQLNYNENLQRFFDSR 180


>AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +2

Query: 206 PFYHHIHHNENIGAHFETR 262
           P Y+ +++NEN+   F++R
Sbjct: 162 PSYNQLNYNENLQRFFDSR 180


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 646,458
Number of Sequences: 2352
Number of extensions: 11842
Number of successful extensions: 24
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)