BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc6d10
(607 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41423 Cluster: Uncharacterized 38.7 kDa protein in PK1... 303 3e-81
UniRef50_Q65361 Cluster: Uncharacterized 36.6 kDa protein; n=7; ... 131 1e-29
UniRef50_Q65342 Cluster: LEF-Autographa californica nuclear poly... 97 4e-19
UniRef50_Q65343 Cluster: Lef-1 protein; n=1; Autographa californ... 67 3e-10
UniRef50_P41417 Cluster: Late expression factor 1; n=14; Nucleop... 43 0.005
UniRef50_Q4X570 Cluster: Kinesin-like protein, putative; n=2; Pl... 36 0.98
UniRef50_Q4MQG1 Cluster: YceG-like protein; n=11; Bacillus cereu... 35 1.7
UniRef50_Q8IHV6 Cluster: Putative uncharacterized protein; n=4; ... 35 1.7
UniRef50_Q7KWX5 Cluster: Putative uncharacterized protein; n=3; ... 35 1.7
UniRef50_P61698 Cluster: Alanyl-tRNA synthetase; n=1; Bdellovibr... 34 2.3
UniRef50_Q54G00 Cluster: Putative uncharacterized protein; n=1; ... 34 3.0
UniRef50_A2EZN2 Cluster: Putative uncharacterized protein; n=1; ... 34 3.0
UniRef50_Q5KLI3 Cluster: Alpha glucosidase, putative; n=2; Filob... 34 3.0
UniRef50_UPI0000EBE71F Cluster: PREDICTED: similar to KIAA1629 p... 33 4.0
UniRef50_Q0JDS1 Cluster: Os04g0381400 protein; n=1; Oryza sativa... 33 4.0
UniRef50_A2XSM9 Cluster: Putative uncharacterized protein; n=1; ... 33 4.0
UniRef50_A2FSZ8 Cluster: Viral A-type inclusion protein, putativ... 33 4.0
UniRef50_A2FLN6 Cluster: Putative uncharacterized protein; n=1; ... 33 5.2
UniRef50_O96282 Cluster: Putative uncharacterized protein PFB095... 33 6.9
UniRef50_Q1WUU1 Cluster: Phosphoesterase; n=1; Lactobacillus sal... 32 9.2
UniRef50_Q0VMK7 Cluster: Putative uncharacterized protein; n=1; ... 32 9.2
UniRef50_Q8I407 Cluster: Putative uncharacterized protein PFE048... 32 9.2
UniRef50_Q23JX4 Cluster: Putative uncharacterized protein; n=1; ... 32 9.2
UniRef50_Q23GD8 Cluster: Putative uncharacterized protein; n=1; ... 32 9.2
UniRef50_O00899 Cluster: GAPA; n=2; Dictyostelium discoideum|Rep... 32 9.2
UniRef50_O34798 Cluster: Uncharacterized protein yjeA precursor;... 32 9.2
UniRef50_Q99750 Cluster: MyoD family inhibitor; n=21; Amniota|Re... 32 9.2
>UniRef50_P41423 Cluster: Uncharacterized 38.7 kDa protein in
PK1-LEF1 intergenic region; n=5;
Nucleopolyhedrovirus|Rep: Uncharacterized 38.7 kDa
protein in PK1-LEF1 intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 327
Score = 303 bits (743), Expect = 3e-81
Identities = 135/151 (89%), Positives = 141/151 (93%)
Frame = +1
Query: 142 RFDPDDYKKYHINVQQWSHIVKWDSFKCNTHSFKYRYVHNDTNAKFYNVIDFCKGLEIAH 321
RF+ DDYKKYHIN QQWSHIVKWDSFKCNTHSFKYRYVH+DTNAK YNVIDFCKGLEIAH
Sbjct: 25 RFNADDYKKYHINAQQWSHIVKWDSFKCNTHSFKYRYVHSDTNAKCYNVIDFCKGLEIAH 84
Query: 322 DDILDCNWDSDQVYHLNEIIFHKQKSKRDLNSLGALFATKQGLLKILMRLNFDNKSNALL 501
DDILDCNWD DQVYHLNEI+FHKQ+SKRDLNSLGALFATK GLL+ILMRLNF NKSNALL
Sbjct: 85 DDILDCNWDGDQVYHLNEIVFHKQRSKRDLNSLGALFATKHGLLEILMRLNFANKSNALL 144
Query: 502 HLQTEGERDDLRDKIESVLKHVKKLNTXQRK 594
H+QTEGERDDLRDKIESVLKHVKKLN K
Sbjct: 145 HIQTEGERDDLRDKIESVLKHVKKLNANSEK 175
>UniRef50_Q65361 Cluster: Uncharacterized 36.6 kDa protein; n=7;
Nucleopolyhedrovirus|Rep: Uncharacterized 36.6 kDa
protein - Orgyia pseudotsugata multicapsid polyhedrosis
virus (OpMNPV)
Length = 320
Score = 131 bits (317), Expect = 1e-29
Identities = 65/152 (42%), Positives = 100/152 (65%), Gaps = 2/152 (1%)
Frame = +1
Query: 145 FDPDDYKKYHINVQQWSHIVKWDSFKCNTHSFKYRYVHNDTNAKFYNVIDFCKGLEIAHD 324
FD Y++Y ++ + S +V+ D F+C+ FK+RYV ++T + +V+DFCKGL+I+HD
Sbjct: 20 FDEQAYRRYAVDQRAHSDLVRRDVFRCHPFVFKFRYVLDETAGRCCSVVDFCKGLKISHD 79
Query: 325 DILDCNWDSDQVYHLNEIIFHKQKSKRDLNSLGALFATKQGLLKILMRLNFDNKSNALLH 504
+ CN+D V LNE++ ++ D SLG+LFATK GL+++L + +F NK+ LL
Sbjct: 80 LLQRCNFDRQHVRQLNELVLGAPPAQPD--SLGSLFATKHGLVQLLQQFSFANKNEVLLA 137
Query: 505 L--QTEGERDDLRDKIESVLKHVKKLNTXQRK 594
+ + +RD+L DKIE+VL HVK LNT K
Sbjct: 138 VGANKDHDRDNLLDKIEAVLNHVKTLNTNSDK 169
>UniRef50_Q65342 Cluster: LEF-Autographa californica nuclear
polyhedrosis virus late expression factor (lef-1) gene
and ecdysteroid UDP-glucosyltransferase genes,; n=1;
Autographa californica nucleopolyhedrovirus|Rep:
LEF-Autographa californica nuclear polyhedrosis virus
late expression factor (lef-1) gene and ecdysteroid
UDP-glucosyltransferase genes, - Autographa californica
nuclear polyhedrosis virus (AcMNPV)
Length = 50
Score = 96.7 bits (230), Expect = 4e-19
Identities = 47/50 (94%), Positives = 48/50 (96%)
Frame = -2
Query: 366 MVNLIAVPIAIKYVVVRNFKTFAKIYYIVEFCVRVVVHVSVLETVRVAFE 217
MVNLIAVPIAIKYVVVRNFKTFAKIY+IV FCVRV VHVSVLETVRVAFE
Sbjct: 1 MVNLIAVPIAIKYVVVRNFKTFAKIYHIVAFCVRVAVHVSVLETVRVAFE 50
>UniRef50_Q65343 Cluster: Lef-1 protein; n=1; Autographa californica
nucleopolyhedrovirus|Rep: Lef-1 protein - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 50
Score = 66.9 bits (156), Expect = 3e-10
Identities = 29/31 (93%), Positives = 29/31 (93%)
Frame = -3
Query: 95 PDHIHQFHNQDSIALICLAIPLLYNEKI*FP 3
PDHIHQFHNQDSIAL CLAIPLLYNEKI FP
Sbjct: 8 PDHIHQFHNQDSIALACLAIPLLYNEKISFP 38
>UniRef50_P41417 Cluster: Late expression factor 1; n=14;
Nucleopolyhedrovirus|Rep: Late expression factor 1 -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 266
Score = 43.2 bits (97), Expect = 0.005
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +2
Query: 2 KGTKFSRCITKELLDKLKQ 58
KGTKFSRCITKELLDKLKQ
Sbjct: 213 KGTKFSRCITKELLDKLKQ 231
>UniRef50_Q4X570 Cluster: Kinesin-like protein, putative; n=2;
Plasmodium chabaudi|Rep: Kinesin-like protein, putative -
Plasmodium chabaudi
Length = 1917
Score = 35.5 bits (78), Expect = 0.98
Identities = 33/108 (30%), Positives = 48/108 (44%), Gaps = 8/108 (7%)
Frame = +1
Query: 199 IVKWDSFKCNTHSFKYRYVHNDT-NAKFYN-VIDFCKGLEIAHDDI------LDCNWDSD 354
++ D C+ + K + NDT KF N +I+ C + I DI +D N+D
Sbjct: 1539 VIGKDGSNCSLNDRKISNISNDTVKEKFVNNIINNCDNIFIDKGDIKYKENIIDNNYDHK 1598
Query: 355 QVYHLNEIIFHKQKSKRDLNSLGALFATKQGLLKILMRLNFDNKSNAL 498
H N I +K K +N+L + K+G L M N N SN L
Sbjct: 1599 NCAHSNCITHYK---KGTVNNLNKMDREKEGSLNNTMSTNV-NMSNLL 1642
>UniRef50_Q4MQG1 Cluster: YceG-like protein; n=11; Bacillus cereus
group|Rep: YceG-like protein - Bacillus cereus G9241
Length = 543
Score = 34.7 bits (76), Expect = 1.7
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Frame = +1
Query: 253 VHNDTNAKFYNVIDF--CKGLEIAHDDILDCNWDSDQVYHLNEIIFHKQKSKRDL--NSL 420
V ND + F + D+ KG+E+ H+ L+ DS+++ H+ E+ Q++ L N L
Sbjct: 50 VPNDVDEYFNELFDYSEAKGIEVLHEQNLNKVIDSEKLRHIQEVFGLHQEAPNGLTVNRL 109
Query: 421 GALFATKQGLLKI 459
A + KQ L K+
Sbjct: 110 VAHLSGKQLLPKV 122
>UniRef50_Q8IHV6 Cluster: Putative uncharacterized protein; n=4;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 1794
Score = 34.7 bits (76), Expect = 1.7
Identities = 19/78 (24%), Positives = 40/78 (51%)
Frame = +1
Query: 280 YNVIDFCKGLEIAHDDILDCNWDSDQVYHLNEIIFHKQKSKRDLNSLGALFATKQGLLKI 459
Y++I+ K I HD +D N + ++Y+ + +I+ K D+ + + T+Q ++ +
Sbjct: 485 YSLIELHKIFFILHDKSIDINDEWKEIYYYSVMIYMKVLKNEDIKKVIECYNTEQIIISL 544
Query: 460 LMRLNFDNKSNALLHLQT 513
L +N + LL +T
Sbjct: 545 LRIMNEFLLKDILLQKKT 562
>UniRef50_Q7KWX5 Cluster: Putative uncharacterized protein; n=3;
Dictyostelium discoideum|Rep: Putative uncharacterized
protein - Dictyostelium discoideum (Slime mold)
Length = 439
Score = 34.7 bits (76), Expect = 1.7
Identities = 21/103 (20%), Positives = 46/103 (44%), Gaps = 3/103 (2%)
Frame = +1
Query: 217 FKCNTHSFKYRYVHNDTNA---KFYNVIDFCKGLEIAHDDILDCNWDSDQVYHLNEIIFH 387
++C +S Y++ + + N+ F EI H +ILDC+ ++ F
Sbjct: 177 YRCIENSDDSSYIYQEKKPGMDSYLNLFQFSSS-EITHGEILDCHQRYLEITEKKLFSFL 235
Query: 388 KQKSKRDLNSLGALFATKQGLLKILMRLNFDNKSNALLHLQTE 516
K + + + ++ + +K +N+DN+SN ++ + E
Sbjct: 236 KFEKEFSIINISDITELHYNFIKSTNIINYDNQSNEIIVISNE 278
>UniRef50_P61698 Cluster: Alanyl-tRNA synthetase; n=1; Bdellovibrio
bacteriovorus|Rep: Alanyl-tRNA synthetase - Bdellovibrio
bacteriovorus
Length = 907
Score = 34.3 bits (75), Expect = 2.3
Identities = 18/64 (28%), Positives = 31/64 (48%)
Frame = +1
Query: 412 NSLGALFATKQGLLKILMRLNFDNKSNALLHLQTEGERDDLRDKIESVLKHVKKLNTXQR 591
N+L + + L L F + + HL+T GE L +++ES+ VK+L +
Sbjct: 719 NALQYMMSAVTHLDDALAAAGFQKSPHYIKHLETTGETATLANRVESLKDQVKQLEKEMK 778
Query: 592 KIYG 603
K+ G
Sbjct: 779 KLQG 782
>UniRef50_Q54G00 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 283
Score = 33.9 bits (74), Expect = 3.0
Identities = 22/82 (26%), Positives = 37/82 (45%)
Frame = +1
Query: 217 FKCNTHSFKYRYVHNDTNAKFYNVIDFCKGLEIAHDDILDCNWDSDQVYHLNEIIFHKQK 396
FK ++ F + DT A + +D GLE+ + DCN ++D + NE++ K
Sbjct: 132 FKNYSNYFTFNKKCKDTTALIFVKLDIVIGLEVLVKEYFDCNNNNDIIQKYNELL-PKSI 190
Query: 397 SKRDLNSLGALFATKQGLLKIL 462
LN L+ G K++
Sbjct: 191 YSGSLNVANFLYNQINGFGKLV 212
>UniRef50_A2EZN2 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 269
Score = 33.9 bits (74), Expect = 3.0
Identities = 24/81 (29%), Positives = 39/81 (48%)
Frame = +1
Query: 148 DPDDYKKYHINVQQWSHIVKWDSFKCNTHSFKYRYVHNDTNAKFYNVIDFCKGLEIAHDD 327
DPD Y ++ + +D+F HS ++ VH+ A Y V+ CKGL+I
Sbjct: 179 DPDPLPSYEPSIFYKIGAITFDAF----HSV-FKNVHSLNMASSYEVLQICKGLQI-QVQ 232
Query: 328 ILDCNWDSDQVYHLNEIIFHK 390
++D +SD + + EI K
Sbjct: 233 VIDV--ESDFTHDIKEIYLRK 251
>UniRef50_Q5KLI3 Cluster: Alpha glucosidase, putative; n=2;
Filobasidiella neoformans|Rep: Alpha glucosidase,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 956
Score = 33.9 bits (74), Expect = 3.0
Identities = 21/75 (28%), Positives = 36/75 (48%)
Frame = +1
Query: 178 NVQQWSHIVKWDSFKCNTHSFKYRYVHNDTNAKFYNVIDFCKGLEIAHDDILDCNWDSDQ 357
N + W K FK S ++ ND N +V D + + + D+I W+
Sbjct: 502 NPKSWDWWTKMFDFKVWKDSTNALFIWNDMNEP--SVFDGPE-ISMPRDNIHAGGWEHRD 558
Query: 358 VYHLNEIIFHKQKSK 402
V+++N ++FHKQ S+
Sbjct: 559 VHNINGMLFHKQTSQ 573
>UniRef50_UPI0000EBE71F Cluster: PREDICTED: similar to KIAA1629
protein; n=1; Bos taurus|Rep: PREDICTED: similar to
KIAA1629 protein - Bos taurus
Length = 366
Score = 33.5 bits (73), Expect = 4.0
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = -1
Query: 349 CPNCNQVCRRAQFQ-DLCKNLLHCRILRSCRCAR 251
CP C VCR A Q + KN LHC RC +
Sbjct: 163 CPECGAVCRSAHVQTHITKNCLHCTWRVGFRCVQ 196
>UniRef50_Q0JDS1 Cluster: Os04g0381400 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os04g0381400 protein -
Oryza sativa subsp. japonica (Rice)
Length = 298
Score = 33.5 bits (73), Expect = 4.0
Identities = 16/27 (59%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +1
Query: 271 AKFYNVIDFCKGLE-IAHDDILDCNWD 348
A+FYNV C +E IAHD +LDC+WD
Sbjct: 258 ARFYNVQPVC--IEGIAHDMMLDCSWD 282
>UniRef50_A2XSM9 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 212
Score = 33.5 bits (73), Expect = 4.0
Identities = 16/27 (59%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +1
Query: 271 AKFYNVIDFCKGLE-IAHDDILDCNWD 348
A+FYNV C +E IAHD +LDC+WD
Sbjct: 172 ARFYNVQPVC--IEGIAHDMMLDCSWD 196
>UniRef50_A2FSZ8 Cluster: Viral A-type inclusion protein, putative;
n=1; Trichomonas vaginalis G3|Rep: Viral A-type
inclusion protein, putative - Trichomonas vaginalis G3
Length = 4045
Score = 33.5 bits (73), Expect = 4.0
Identities = 26/107 (24%), Positives = 58/107 (54%), Gaps = 5/107 (4%)
Frame = +1
Query: 292 DFCKGLEIAHDDILDC-NWDSDQVYHL-NEIIFHKQK---SKRDLNSLGALFATKQGLLK 456
DF K + A +++ + + +SD + +L NE++ K+K SK + + +L L K
Sbjct: 607 DFIKYIRKAKNEVRNALSENSDLIENLQNELLNMKEKLQNSKAENKQILSLQPKINDLNK 666
Query: 457 ILMRLNFDNKSNALLHLQTEGERDDLRDKIESVLKHVKKLNTXQRKI 597
I+ ++ +N+ + + E + L+D+ E+++ + KKL T +++
Sbjct: 667 IMTQIQKENERLQKTNKEKNNEIEKLKDENENLVSNNKKLQTENKEL 713
>UniRef50_A2FLN6 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 2865
Score = 33.1 bits (72), Expect = 5.2
Identities = 32/128 (25%), Positives = 61/128 (47%), Gaps = 2/128 (1%)
Frame = +1
Query: 199 IVKWDSFKCNTHSFKYRYVHNDTNAKFYNVIDFCKGLEIAHDDILDCNWDSDQVYHLNEI 378
++K S + + +YR V + V + +I D I++ + V H+N +
Sbjct: 741 LIKLQSLELESQETEYRNVIESRFIQKSKVTKISEEEKILLDKIINEENNLKFVDHMNSV 800
Query: 379 I--FHKQKSKRDLNSLGALFATKQGLLKILMRLNFDNKSNALLHLQTEGERDDLRDKIES 552
+ H+ K + NSL A K + +L +LN + +A+ Q++ E+D+ D I +
Sbjct: 801 VKSLHRAKQSPE-NSL----AEKYIISSLLYQLNLLGECSAI---QSKLEKDEKVDNISN 852
Query: 553 VLKHVKKL 576
LKHV ++
Sbjct: 853 ELKHVWRI 860
>UniRef50_O96282 Cluster: Putative uncharacterized protein PFB0950w;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PFB0950w - Plasmodium falciparum
(isolate 3D7)
Length = 307
Score = 32.7 bits (71), Expect = 6.9
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = -1
Query: 304 LCKNLLHCRILRSCRCARICT*NCACCI*MNPI*RCATIVGRLCGTFCS 158
LC + C L SC C+ IC+ C+C I C I LC CS
Sbjct: 199 LCSCICSCSSLCSCICSCICSCICSC------ICTCTCICSCLCSCICS 241
>UniRef50_Q1WUU1 Cluster: Phosphoesterase; n=1; Lactobacillus
salivarius subsp. salivarius UCC118|Rep: Phosphoesterase
- Lactobacillus salivarius subsp. salivarius (strain
UCC118)
Length = 201
Score = 32.3 bits (70), Expect = 9.2
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Frame = +1
Query: 217 FKCNTHSFKYRYVHND--TNAKFYNVIDFCKGLEIAHDDILDCNWDSDQVYHLNEIIFHK 390
F +TH F +H+ N F++V D + + +++ D+D VYHL +I
Sbjct: 4 FTADTHFFHKELIHDTRFANRMFFSVNDMNNTIVENWNSVVN---DNDTVYHLGDIALIN 60
Query: 391 QKSKRDLNSLGALFATKQGLLKILMRLNFDNKS 489
K K DL + + +G + + ++ N D+++
Sbjct: 61 SK-KEDLKRVLEILKKLKGQI-VFLKGNHDSRA 91
>UniRef50_Q0VMK7 Cluster: Putative uncharacterized protein; n=1;
Alcanivorax borkumensis SK2|Rep: Putative
uncharacterized protein - Alcanivorax borkumensis
(strain SK2 / ATCC 700651 / DSM 11573)
Length = 142
Score = 32.3 bits (70), Expect = 9.2
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 202 VKWDSFKCNTHSFKYRYVHNDTNAKFYNVIDFCKGLEIAHDDILD 336
V +DS C F + + D ++ +++D CK L HDDI+D
Sbjct: 59 VCFDSRTCGYDGFVCKSEYEDLGDEYDDLLDDCKELAHEHDDIID 103
>UniRef50_Q8I407 Cluster: Putative uncharacterized protein PFE0480c;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PFE0480c - Plasmodium falciparum
(isolate 3D7)
Length = 395
Score = 32.3 bits (70), Expect = 9.2
Identities = 33/149 (22%), Positives = 63/149 (42%), Gaps = 5/149 (3%)
Frame = +1
Query: 172 HINVQQWSHIVKWDSFKC-NTHSFKYRYVHNDTNAKFYNVIDFCKGLEIAHDDIL--DCN 342
++ VQ+ SHI+K KC + S NA +I L+ + ++ +CN
Sbjct: 211 NVKVQEDSHIIKEIELKCIDISSISNENTEGKENASVDILIKDSSNLKSEKNRMMYNECN 270
Query: 343 WDSDQVYHLNEIIFHKQKSKRDLNSLGALFATKQGLLKILMRLNFDNKSNALLHLQTEGE 522
+D +N I + + S++ N L + LL ++ + +++ K N LL+
Sbjct: 271 LTNDFFETVNNI--NTEVSEKYNN----LKDSCNKLLDVINKSDYEKKINDLLNFSQRNS 324
Query: 523 R--DDLRDKIESVLKHVKKLNTXQRKIYG 603
D + K + ++ +K T I G
Sbjct: 325 ELVDQFKQKSDECIQRCRKFETTSENIVG 353
>UniRef50_Q23JX4 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 628
Score = 32.3 bits (70), Expect = 9.2
Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 7/135 (5%)
Frame = +1
Query: 199 IVKWDSFKCNTHSFKYRYVHNDTNAKFYNVIDFCKGLEIAHDDILDCNWDSDQVYHLNEI 378
I+ D+ K ++ + V N N + +I+F K EI DD + S LN+I
Sbjct: 483 IIAIDNLKMQVNTQIQQSVQNQENKQQKQIIEFMKLFEIGEDDNVQTK-ISQIFLQLNDI 541
Query: 379 --IFHKQKSKRDLNSLGALFATKQGLLKIL--MRLNFDNKSNALLHLQTEGERDD---LR 537
K +L+ A +LK+L M+LN N + ++ +Q + DD +
Sbjct: 542 QRFIKITKKLLELDEDMRSEACLTYILKLLEKMKLNKYNDPDLIIKIQKALKVDDPVQIL 601
Query: 538 DKIESVLKHVKKLNT 582
KIE +L+ KLNT
Sbjct: 602 PKIE-ILQKNSKLNT 615
>UniRef50_Q23GD8 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 437
Score = 32.3 bits (70), Expect = 9.2
Identities = 24/90 (26%), Positives = 43/90 (47%)
Frame = +1
Query: 322 DDILDCNWDSDQVYHLNEIIFHKQKSKRDLNSLGALFATKQGLLKILMRLNFDNKSNALL 501
DD L + D D +Y + ++Q+ K D N LF ++Q LLK L LN + +++
Sbjct: 296 DDDLGGDDDDDNLYFDFKKDKNEQQQKPDQNFDKMLFESRQNLLKNLDNLNINQNNSSSQ 355
Query: 502 HLQTEGERDDLRDKIESVLKHVKKLNTXQR 591
+ + L ++ E + K + L +R
Sbjct: 356 QQAQQQPAETLEERKERLKKQREMLLEKKR 385
>UniRef50_O00899 Cluster: GAPA; n=2; Dictyostelium discoideum|Rep:
GAPA - Dictyostelium discoideum (Slime mold)
Length = 860
Score = 32.3 bits (70), Expect = 9.2
Identities = 20/82 (24%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +1
Query: 346 DSDQVYHLNEIIFHKQKSKRDLNSLGALFA-TKQGLLKILMRLNFDNKSNALLHLQTEGE 522
++D+ L I K+ +++++ +L A TK+ ++ +L + K H + +
Sbjct: 587 ENDREIQLTLINRFKENIEKEISISASLLAETKELVISVLRSIPIQQKQQQQQH--DDEK 644
Query: 523 RDDLRDKIESVLKHVKKLNTXQ 588
RDDL +++ +KH K+ N Q
Sbjct: 645 RDDLISILQNAIKHGKETNNPQ 666
>UniRef50_O34798 Cluster: Uncharacterized protein yjeA precursor;
n=7; Bacillus|Rep: Uncharacterized protein yjeA
precursor - Bacillus subtilis
Length = 467
Score = 32.3 bits (70), Expect = 9.2
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Frame = +1
Query: 241 KYRYV---HNDTNAKFYNVIDFCKGLEIAHDDILDCNWDSDQVYHLNEIIFHKQKSKRDL 411
+Y+Y+ H T K +N DF K ++ DDI D+D ++ L+ I +H+ K +D+
Sbjct: 127 EYKYIGGAHGQTVKKTFNY-DFSKQAFLSIDDIF--KEDADYLHKLSLIAYHELKKNKDI 183
Query: 412 NSLGAL 429
+ AL
Sbjct: 184 AADDAL 189
>UniRef50_Q99750 Cluster: MyoD family inhibitor; n=21; Amniota|Rep:
MyoD family inhibitor - Homo sapiens (Human)
Length = 246
Score = 32.3 bits (70), Expect = 9.2
Identities = 16/49 (32%), Positives = 20/49 (40%)
Frame = -1
Query: 370 LNGKLDRCPNCNQVCRRAQFQDLCKNLLHCRILRSCRCARICT*NCACC 224
L + D C +C C +F LC +L C SC C C CC
Sbjct: 157 LQAQEDCCVHCILSCLFCEFLTLCNIVLDCATCGSCSSEDSCL--CCCC 203
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 473,977,348
Number of Sequences: 1657284
Number of extensions: 8513073
Number of successful extensions: 27414
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 26182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27339
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43147568152
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -