Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc6d01
(367 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 29 0.015
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 29 0.015
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 29 0.015
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 29 0.015
AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase ... 28 0.034
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 28 0.034
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 28 0.034
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 28 0.034
DQ659252-1|ABG47450.1| 377|Tribolium castaneum chitinase 13 pro... 22 1.7
AJ845189-1|CAH60166.1| 515|Tribolium castaneum putative esteras... 21 3.9
AJ845188-1|CAH60165.1| 517|Tribolium castaneum putative esteras... 21 3.9
AJ845187-1|CAH60164.1| 515|Tribolium castaneum esterase protein. 21 3.9
AJ844897-1|CAH59956.1| 517|Tribolium castaneum esterase protein. 21 3.9
DQ855490-1|ABH88177.1| 133|Tribolium castaneum chemosensory pro... 20 9.1
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 20 9.1
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 29.1 bits (62), Expect = 0.015
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 2 ITCVYLCIDRCGQLYGSKTLSDDCFMREIMEKNNYNTYYKMYDR 133
I CV LC C L+ K L DD M++ ++ +Y YD+
Sbjct: 795 IGCV-LCSPGCFSLFRGKALMDDNVMKKYTTSSSEARHYVQYDQ 837
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 29.1 bits (62), Expect = 0.015
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 2 ITCVYLCIDRCGQLYGSKTLSDDCFMREIMEKNNYNTYYKMYDR 133
I CV LC C L+ K L DD M++ ++ +Y YD+
Sbjct: 795 IGCV-LCSPGCFSLFRGKALMDDNVMKKYTTSSSEARHYVQYDQ 837
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 29.1 bits (62), Expect = 0.015
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 2 ITCVYLCIDRCGQLYGSKTLSDDCFMREIMEKNNYNTYYKMYDR 133
I CV LC C L+ K L DD M++ ++ +Y YD+
Sbjct: 795 IGCV-LCSPGCFSLFRGKALMDDNVMKKYTTSSSEARHYVQYDQ 837
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 29.1 bits (62), Expect = 0.015
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 2 ITCVYLCIDRCGQLYGSKTLSDDCFMREIMEKNNYNTYYKMYDR 133
I CV LC C L+ K L DD M++ ++ +Y YD+
Sbjct: 795 IGCV-LCSPGCFSLFRGKALMDDNVMKKYTTSSSEARHYVQYDQ 837
>AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase
protein.
Length = 268
Score = 27.9 bits (59), Expect = 0.034
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 2 ITCVYLCIDRCGQLYGSKTLSDDCFMREIMEKNNYNTYYKMYDR 133
I CV LC C L+ K L D M++ ++ +Y YD+
Sbjct: 221 IGCV-LCSPGCFSLFRGKALMDKSVMKKYTTRSTQAKHYVQYDQ 263
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 27.9 bits (59), Expect = 0.034
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 2 ITCVYLCIDRCGQLYGSKTLSDDCFMREIMEKNNYNTYYKMYDR 133
I CV LC C L+ K L D M++ ++ +Y YD+
Sbjct: 535 IGCV-LCSPGCFSLFRGKALMDKSVMKKYTTRSTQAKHYVQYDQ 577
Score = 20.2 bits (40), Expect = 6.9
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +2
Query: 206 GKFSVYAMTLLKRLSFPIYTSCP 274
GKFS M +FPI S P
Sbjct: 149 GKFSCKVMIQSVSFAFPINLSVP 171
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 27.9 bits (59), Expect = 0.034
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 2 ITCVYLCIDRCGQLYGSKTLSDDCFMREIMEKNNYNTYYKMYDR 133
I CV LC C L+ K L D M++ ++ +Y YD+
Sbjct: 768 IGCV-LCSPGCFSLFRGKALMDKSVMKKYTTRSTQAKHYVQYDQ 810
Score = 20.2 bits (40), Expect = 6.9
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +2
Query: 206 GKFSVYAMTLLKRLSFPIYTSCP 274
GKFS M +FPI S P
Sbjct: 382 GKFSCKVMIQSVSFAFPINLSVP 404
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 27.9 bits (59), Expect = 0.034
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 2 ITCVYLCIDRCGQLYGSKTLSDDCFMREIMEKNNYNTYYKMYDR 133
I CV LC C L+ K L D M++ ++ +Y YD+
Sbjct: 768 IGCV-LCSPGCFSLFRGKALMDKSVMKKYTTRSTQAKHYVQYDQ 810
Score = 20.2 bits (40), Expect = 6.9
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +2
Query: 206 GKFSVYAMTLLKRLSFPIYTSCP 274
GKFS M +FPI S P
Sbjct: 382 GKFSCKVMIQSVSFAFPINLSVP 404
>DQ659252-1|ABG47450.1| 377|Tribolium castaneum chitinase 13
protein.
Length = 377
Score = 22.2 bits (45), Expect = 1.7
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2
Query: 222 YTLNLPSLRPFEICSF 175
YT+NL SL EIC F
Sbjct: 285 YTVNLGSLGYNEICEF 300
>AJ845189-1|CAH60166.1| 515|Tribolium castaneum putative esterase
protein.
Length = 515
Score = 21.0 bits (42), Expect = 3.9
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -2
Query: 189 EICSFRGVP 163
E CSF+GVP
Sbjct: 23 EFCSFQGVP 31
>AJ845188-1|CAH60165.1| 517|Tribolium castaneum putative esterase
protein.
Length = 517
Score = 21.0 bits (42), Expect = 3.9
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -2
Query: 189 EICSFRGVP 163
E CSF+GVP
Sbjct: 25 EFCSFQGVP 33
>AJ845187-1|CAH60164.1| 515|Tribolium castaneum esterase protein.
Length = 515
Score = 21.0 bits (42), Expect = 3.9
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -2
Query: 189 EICSFRGVP 163
E CSF+GVP
Sbjct: 23 EFCSFQGVP 31
>AJ844897-1|CAH59956.1| 517|Tribolium castaneum esterase protein.
Length = 517
Score = 21.0 bits (42), Expect = 3.9
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -2
Query: 189 EICSFRGVP 163
E CSF+GVP
Sbjct: 25 EFCSFQGVP 33
>DQ855490-1|ABH88177.1| 133|Tribolium castaneum chemosensory
protein 4 protein.
Length = 133
Score = 19.8 bits (39), Expect = 9.1
Identities = 6/16 (37%), Positives = 9/16 (56%)
Frame = -2
Query: 57 VFDPYSWPHRSMHRYT 10
+F Y W + H+YT
Sbjct: 12 LFVHYGWSEDTTHKYT 27
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 19.8 bits (39), Expect = 9.1
Identities = 6/16 (37%), Positives = 7/16 (43%)
Frame = -3
Query: 146 HTSTCDRTFYNTYCSY 99
H TC FY C +
Sbjct: 360 HKCTCPEGFYGKNCEF 375
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,445
Number of Sequences: 336
Number of extensions: 1718
Number of successful extensions: 18
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used: 7510735
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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