Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc6c19
(655 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457175-1|CAG33456.1| 505|Homo sapiens HSPC117 protein. 297 2e-80
CR456450-1|CAG30336.1| 505|Homo sapiens dJ149A16.6 protein. 297 2e-80
BC016707-1|AAH16707.1| 505|Homo sapiens chromosome 22 open read... 297 2e-80
BC010308-1|AAH10308.1| 505|Homo sapiens chromosome 22 open read... 297 2e-80
BC002970-1|AAH02970.1| 505|Homo sapiens chromosome 22 open read... 297 2e-80
BC000151-1|AAH00151.1| 505|Homo sapiens chromosome 22 open read... 297 2e-80
AL050255-1|CAB43357.1| 505|Homo sapiens hypothetical protein pr... 297 2e-80
AL021937-9|CAB38260.1| 505|Homo sapiens chromosome 22 open read... 297 2e-80
AF155658-1|AAF67477.1| 505|Homo sapiens putative 55 kDa protein... 297 2e-80
Y09321-1|CAA70499.1| 801|Homo sapiens TBP associated factor pro... 32 1.6
AY888049-1|AAX14898.1| 618|Homo sapiens TAFII105-E9 protein. 32 1.6
AY888048-1|AAX14897.1| 862|Homo sapiens TAFII105 protein. 32 1.6
AB234096-1|BAF51561.1| 867|Homo sapiens TATA box binding protei... 32 1.6
>CR457175-1|CAG33456.1| 505|Homo sapiens HSPC117 protein.
Length = 505
Score = 297 bits (730), Expect = 2e-80
Identities = 135/167 (80%), Positives = 149/167 (89%)
Frame = +1
Query: 154 RQYNEELKYLEKINPYCWRIKKGFQPNMNVEGVFYVNSTLEKLMLEELRNCCRPGMSGGF 333
R YN+EL++LEKIN CWRIKKGF PNM VEGVFYVN LEKLM EELRN CR G GGF
Sbjct: 3 RSYNDELQFLEKINKNCWRIKKGFVPNMQVEGVFYVNDALEKLMFEELRNACRGGGVGGF 62
Query: 334 LPGVKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINC 513
LP +KQI NVAALPGIV RS+GLPDVHSGYGFAIGNMAAFDM+DP+++VSPGGVGFDINC
Sbjct: 63 LPAMKQIGNVAALPGIVHRSIGLPDVHSGYGFAIGNMAAFDMNDPEAVVSPGGVGFDINC 122
Query: 514 GVRLLRTNLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLE 654
GVRLLRTNL E DV P+KEQLAQ++FDHIPVGVGSKG+IPMNA+DLE
Sbjct: 123 GVRLLRTNLDESDVQPVKEQLAQAMFDHIPVGVGSKGVIPMNAKDLE 169
>CR456450-1|CAG30336.1| 505|Homo sapiens dJ149A16.6 protein.
Length = 505
Score = 297 bits (730), Expect = 2e-80
Identities = 135/167 (80%), Positives = 149/167 (89%)
Frame = +1
Query: 154 RQYNEELKYLEKINPYCWRIKKGFQPNMNVEGVFYVNSTLEKLMLEELRNCCRPGMSGGF 333
R YN+EL++LEKIN CWRIKKGF PNM VEGVFYVN LEKLM EELRN CR G GGF
Sbjct: 3 RSYNDELQFLEKINKNCWRIKKGFVPNMQVEGVFYVNDALEKLMFEELRNACRGGGVGGF 62
Query: 334 LPGVKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINC 513
LP +KQI NVAALPGIV RS+GLPDVHSGYGFAIGNMAAFDM+DP+++VSPGGVGFDINC
Sbjct: 63 LPAMKQIGNVAALPGIVHRSIGLPDVHSGYGFAIGNMAAFDMNDPEAVVSPGGVGFDINC 122
Query: 514 GVRLLRTNLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLE 654
GVRLLRTNL E DV P+KEQLAQ++FDHIPVGVGSKG+IPMNA+DLE
Sbjct: 123 GVRLLRTNLDESDVQPVKEQLAQAMFDHIPVGVGSKGVIPMNAKDLE 169
>BC016707-1|AAH16707.1| 505|Homo sapiens chromosome 22 open reading
frame 28 protein.
Length = 505
Score = 297 bits (730), Expect = 2e-80
Identities = 135/167 (80%), Positives = 149/167 (89%)
Frame = +1
Query: 154 RQYNEELKYLEKINPYCWRIKKGFQPNMNVEGVFYVNSTLEKLMLEELRNCCRPGMSGGF 333
R YN+EL++LEKIN CWRIKKGF PNM VEGVFYVN LEKLM EELRN CR G GGF
Sbjct: 3 RSYNDELQFLEKINKNCWRIKKGFVPNMQVEGVFYVNDALEKLMFEELRNACRGGGVGGF 62
Query: 334 LPGVKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINC 513
LP +KQI NVAALPGIV RS+GLPDVHSGYGFAIGNMAAFDM+DP+++VSPGGVGFDINC
Sbjct: 63 LPAMKQIGNVAALPGIVHRSIGLPDVHSGYGFAIGNMAAFDMNDPEAVVSPGGVGFDINC 122
Query: 514 GVRLLRTNLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLE 654
GVRLLRTNL E DV P+KEQLAQ++FDHIPVGVGSKG+IPMNA+DLE
Sbjct: 123 GVRLLRTNLDESDVQPVKEQLAQAMFDHIPVGVGSKGVIPMNAKDLE 169
>BC010308-1|AAH10308.1| 505|Homo sapiens chromosome 22 open reading
frame 28 protein.
Length = 505
Score = 297 bits (730), Expect = 2e-80
Identities = 135/167 (80%), Positives = 149/167 (89%)
Frame = +1
Query: 154 RQYNEELKYLEKINPYCWRIKKGFQPNMNVEGVFYVNSTLEKLMLEELRNCCRPGMSGGF 333
R YN+EL++LEKIN CWRIKKGF PNM VEGVFYVN LEKLM EELRN CR G GGF
Sbjct: 3 RSYNDELQFLEKINKNCWRIKKGFVPNMQVEGVFYVNDALEKLMFEELRNACRGGGVGGF 62
Query: 334 LPGVKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINC 513
LP +KQI NVAALPGIV RS+GLPDVHSGYGFAIGNMAAFDM+DP+++VSPGGVGFDINC
Sbjct: 63 LPAMKQIGNVAALPGIVHRSIGLPDVHSGYGFAIGNMAAFDMNDPEAVVSPGGVGFDINC 122
Query: 514 GVRLLRTNLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLE 654
GVRLLRTNL E DV P+KEQLAQ++FDHIPVGVGSKG+IPMNA+DLE
Sbjct: 123 GVRLLRTNLDESDVQPVKEQLAQAMFDHIPVGVGSKGVIPMNAKDLE 169
>BC002970-1|AAH02970.1| 505|Homo sapiens chromosome 22 open reading
frame 28 protein.
Length = 505
Score = 297 bits (730), Expect = 2e-80
Identities = 135/167 (80%), Positives = 149/167 (89%)
Frame = +1
Query: 154 RQYNEELKYLEKINPYCWRIKKGFQPNMNVEGVFYVNSTLEKLMLEELRNCCRPGMSGGF 333
R YN+EL++LEKIN CWRIKKGF PNM VEGVFYVN LEKLM EELRN CR G GGF
Sbjct: 3 RSYNDELQFLEKINKNCWRIKKGFVPNMQVEGVFYVNDALEKLMFEELRNACRGGGVGGF 62
Query: 334 LPGVKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINC 513
LP +KQI NVAALPGIV RS+GLPDVHSGYGFAIGNMAAFDM+DP+++VSPGGVGFDINC
Sbjct: 63 LPAMKQIGNVAALPGIVHRSIGLPDVHSGYGFAIGNMAAFDMNDPEAVVSPGGVGFDINC 122
Query: 514 GVRLLRTNLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLE 654
GVRLLRTNL E DV P+KEQLAQ++FDHIPVGVGSKG+IPMNA+DLE
Sbjct: 123 GVRLLRTNLDESDVQPVKEQLAQAMFDHIPVGVGSKGVIPMNAKDLE 169
>BC000151-1|AAH00151.1| 505|Homo sapiens chromosome 22 open reading
frame 28 protein.
Length = 505
Score = 297 bits (730), Expect = 2e-80
Identities = 135/167 (80%), Positives = 149/167 (89%)
Frame = +1
Query: 154 RQYNEELKYLEKINPYCWRIKKGFQPNMNVEGVFYVNSTLEKLMLEELRNCCRPGMSGGF 333
R YN+EL++LEKIN CWRIKKGF PNM VEGVFYVN LEKLM EELRN CR G GGF
Sbjct: 3 RSYNDELQFLEKINKNCWRIKKGFVPNMQVEGVFYVNDALEKLMFEELRNACRGGGVGGF 62
Query: 334 LPGVKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINC 513
LP +KQI NVAALPGIV RS+GLPDVHSGYGFAIGNMAAFDM+DP+++VSPGGVGFDINC
Sbjct: 63 LPAMKQIGNVAALPGIVHRSIGLPDVHSGYGFAIGNMAAFDMNDPEAVVSPGGVGFDINC 122
Query: 514 GVRLLRTNLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLE 654
GVRLLRTNL E DV P+KEQLAQ++FDHIPVGVGSKG+IPMNA+DLE
Sbjct: 123 GVRLLRTNLDESDVQPVKEQLAQAMFDHIPVGVGSKGVIPMNAKDLE 169
>AL050255-1|CAB43357.1| 505|Homo sapiens hypothetical protein
protein.
Length = 505
Score = 297 bits (730), Expect = 2e-80
Identities = 135/167 (80%), Positives = 149/167 (89%)
Frame = +1
Query: 154 RQYNEELKYLEKINPYCWRIKKGFQPNMNVEGVFYVNSTLEKLMLEELRNCCRPGMSGGF 333
R YN+EL++LEKIN CWRIKKGF PNM VEGVFYVN LEKLM EELRN CR G GGF
Sbjct: 3 RSYNDELQFLEKINKNCWRIKKGFVPNMQVEGVFYVNDALEKLMFEELRNACRGGGVGGF 62
Query: 334 LPGVKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINC 513
LP +KQI NVAALPGIV RS+GLPDVHSGYGFAIGNMAAFDM+DP+++VSPGGVGFDINC
Sbjct: 63 LPAMKQIGNVAALPGIVHRSIGLPDVHSGYGFAIGNMAAFDMNDPEAVVSPGGVGFDINC 122
Query: 514 GVRLLRTNLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLE 654
GVRLLRTNL E DV P+KEQLAQ++FDHIPVGVGSKG+IPMNA+DLE
Sbjct: 123 GVRLLRTNLDESDVQPVKEQLAQAMFDHIPVGVGSKGVIPMNAKDLE 169
>AL021937-9|CAB38260.1| 505|Homo sapiens chromosome 22 open reading
frame 28 protein.
Length = 505
Score = 297 bits (730), Expect = 2e-80
Identities = 135/167 (80%), Positives = 149/167 (89%)
Frame = +1
Query: 154 RQYNEELKYLEKINPYCWRIKKGFQPNMNVEGVFYVNSTLEKLMLEELRNCCRPGMSGGF 333
R YN+EL++LEKIN CWRIKKGF PNM VEGVFYVN LEKLM EELRN CR G GGF
Sbjct: 3 RSYNDELQFLEKINKNCWRIKKGFVPNMQVEGVFYVNDALEKLMFEELRNACRGGGVGGF 62
Query: 334 LPGVKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINC 513
LP +KQI NVAALPGIV RS+GLPDVHSGYGFAIGNMAAFDM+DP+++VSPGGVGFDINC
Sbjct: 63 LPAMKQIGNVAALPGIVHRSIGLPDVHSGYGFAIGNMAAFDMNDPEAVVSPGGVGFDINC 122
Query: 514 GVRLLRTNLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLE 654
GVRLLRTNL E DV P+KEQLAQ++FDHIPVGVGSKG+IPMNA+DLE
Sbjct: 123 GVRLLRTNLDESDVQPVKEQLAQAMFDHIPVGVGSKGVIPMNAKDLE 169
>AF155658-1|AAF67477.1| 505|Homo sapiens putative 55 kDa protein
protein.
Length = 505
Score = 297 bits (730), Expect = 2e-80
Identities = 135/167 (80%), Positives = 149/167 (89%)
Frame = +1
Query: 154 RQYNEELKYLEKINPYCWRIKKGFQPNMNVEGVFYVNSTLEKLMLEELRNCCRPGMSGGF 333
R YN+EL++LEKIN CWRIKKGF PNM VEGVFYVN LEKLM EELRN CR G GGF
Sbjct: 3 RSYNDELQFLEKINKNCWRIKKGFVPNMQVEGVFYVNDALEKLMFEELRNACRGGGVGGF 62
Query: 334 LPGVKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDMDDPKSIVSPGGVGFDINC 513
LP +KQI NVAALPGIV RS+GLPDVHSGYGFAIGNMAAFDM+DP+++VSPGGVGFDINC
Sbjct: 63 LPAMKQIGNVAALPGIVHRSIGLPDVHSGYGFAIGNMAAFDMNDPEAVVSPGGVGFDINC 122
Query: 514 GVRLLRTNLHEKDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNARDLE 654
GVRLLRTNL E DV P+KEQLAQ++FDHIPVGVGSKG+IPMNA+DLE
Sbjct: 123 GVRLLRTNLDESDVQPVKEQLAQAMFDHIPVGVGSKGVIPMNAKDLE 169
>Y09321-1|CAA70499.1| 801|Homo sapiens TBP associated factor
protein.
Length = 801
Score = 32.3 bits (70), Expect = 1.6
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = -3
Query: 527 NKRTPQFISN-PTPPGDTIDLGSSISKAAIFPIANPYPE*TSGNPTDRPTIPGKAATLAI 351
N T QF +N PPG + +S + P T+ N T RP +P T+ I
Sbjct: 34 NTTTIQFPANLQLPPGTVLIKSNSGPLMLVSPQQTVTRAETTSNITSRPAVPANPQTVKI 93
Query: 350 CFTP 339
C P
Sbjct: 94 CTVP 97
>AY888049-1|AAX14898.1| 618|Homo sapiens TAFII105-E9 protein.
Length = 618
Score = 32.3 bits (70), Expect = 1.6
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = -3
Query: 527 NKRTPQFISN-PTPPGDTIDLGSSISKAAIFPIANPYPE*TSGNPTDRPTIPGKAATLAI 351
N T QF +N PPG + +S + P T+ N T RP +P T+ I
Sbjct: 100 NTTTIQFPANLQLPPGTVLIKSNSGPLMLVSPQQTVTRAETTSNITSRPAVPANPQTVKI 159
Query: 350 CFTP 339
C P
Sbjct: 160 CTVP 163
>AY888048-1|AAX14897.1| 862|Homo sapiens TAFII105 protein.
Length = 862
Score = 32.3 bits (70), Expect = 1.6
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = -3
Query: 527 NKRTPQFISN-PTPPGDTIDLGSSISKAAIFPIANPYPE*TSGNPTDRPTIPGKAATLAI 351
N T QF +N PPG + +S + P T+ N T RP +P T+ I
Sbjct: 100 NTTTIQFPANLQLPPGTVLIKSNSGPLMLVSPQQTVTRAETTSNITSRPAVPANPQTVKI 159
Query: 350 CFTP 339
C P
Sbjct: 160 CTVP 163
>AB234096-1|BAF51561.1| 867|Homo sapiens TATA box binding protein
(TBP)-associated factor 4B protein.
Length = 867
Score = 32.3 bits (70), Expect = 1.6
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = -3
Query: 527 NKRTPQFISN-PTPPGDTIDLGSSISKAAIFPIANPYPE*TSGNPTDRPTIPGKAATLAI 351
N T QF +N PPG + +S + P T+ N T RP +P T+ I
Sbjct: 100 NTTTIQFPANLQLPPGTVLIKSNSGPLMLVSPQQTVTRAETTSNITSRPAVPANPQTVKI 159
Query: 350 CFTP 339
C P
Sbjct: 160 CTVP 163
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,385,305
Number of Sequences: 237096
Number of extensions: 2329835
Number of successful extensions: 8252
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 7993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8230
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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